More than 300 homologs were found in PanDaTox collection
for query gene Jann_0170 on replicon NC_007802
Organism: Jannaschia sp. CCS1



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009719  Plav_0781  1-deoxy-D-xylulose-5-phosphate synthase  60.51 
 
 
650 aa  771    Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.128474  normal  0.356919 
 
 
-
 
NC_010511  M446_6352  1-deoxy-D-xylulose-5-phosphate synthase  61.73 
 
 
654 aa  748    Methylobacterium sp. 4-46  Bacteria  normal  0.540512  normal  0.249842 
 
 
-
 
NC_009049  Rsph17029_2795  1-deoxy-D-xylulose-5-phosphate synthase  63.62 
 
 
637 aa  812    Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_009952  Dshi_3526  1-deoxy-D-xylulose-5-phosphate synthase  75.71 
 
 
658 aa  967    Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_3992  1-deoxy-D-xylulose-5-phosphate synthase  61.51 
 
 
664 aa  762    Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.0302614 
 
 
-
 
NC_011365  Gdia_1289  1-deoxy-D-xylulose-5-phosphate synthase  60.22 
 
 
704 aa  753    Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_0717  1-deoxy-D-xylulose-5-phosphate synthase  59.18 
 
 
642 aa  739    Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_004310  BR0436  1-deoxy-D-xylulose-5-phosphate synthase  60.93 
 
 
643 aa  757    Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_0492  1-deoxy-D-xylulose-5-phosphate synthase  60.32 
 
 
637 aa  759    Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_4733  1-deoxy-D-xylulose-5-phosphate synthase  61.72 
 
 
643 aa  752    Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_009428  Rsph17025_2792  1-deoxy-D-xylulose-5-phosphate synthase  63.94 
 
 
637 aa  819    Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.250893  normal 
 
 
-
 
NC_011757  Mchl_2215  1-deoxy-D-xylulose-5-phosphate synthase  61.25 
 
 
660 aa  754    Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_1022  1-deoxy-D-xylulose-5-phosphate synthase  60.74 
 
 
641 aa  759    Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.221512  n/a   
 
 
-
 
NC_007406  Nwi_0633  1-deoxy-D-xylulose-5-phosphate synthase  59.65 
 
 
666 aa  763    Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.300424  normal 
 
 
-
 
NC_010581  Bind_1811  1-deoxy-D-xylulose-5-phosphate synthase  59.81 
 
 
642 aa  741    Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.776218 
 
 
-
 
NC_011365  Gdia_0087  1-deoxy-D-xylulose-5-phosphate synthase  60.47 
 
 
667 aa  753    Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.0603338  normal  0.251774 
 
 
-
 
NC_012850  Rleg_0607  1-deoxy-D-xylulose-5-phosphate synthase  60.16 
 
 
638 aa  758    Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.215846 
 
 
-
 
NC_007493  RSP_0254  1-deoxy-D-xylulose-5-phosphate synthase  71.04 
 
 
648 aa  919    Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_007493  RSP_1134  1-deoxy-D-xylulose-5-phosphate synthase  63.46 
 
 
637 aa  811    Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.310959  n/a   
 
 
-
 
NC_011757  Mchl_4678  1-deoxy-D-xylulose-5-phosphate synthase  61.25 
 
 
658 aa  755    Methylobacterium chloromethanicum CM4  Bacteria  normal  0.942989  normal  0.352645 
 
 
-
 
NC_010505  Mrad2831_3459  1-deoxy-D-xylulose-5-phosphate synthase  61.88 
 
 
656 aa  762    Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.841301 
 
 
-
 
NC_010172  Mext_4309  1-deoxy-D-xylulose-5-phosphate synthase  61.25 
 
 
658 aa  754    Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_008783  BARBAKC583_0400  1-deoxy-D-xylulose-5-phosphate synthase  57.05 
 
 
638 aa  721    Bartonella bacilliformis KC583  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_1461  1-deoxy-D-xylulose-5-phosphate synthase  62.3 
 
 
639 aa  780    Sphingomonas wittichii RW1  Bacteria  normal  0.289953  normal 
 
 
-
 
NC_011989  Avi_0997  1-deoxy-D-xylulose-5-phosphate synthase  61.65 
 
 
639 aa  782    Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A0054  1-deoxy-D-xylulose-5-phosphate synthase  59.59 
 
 
645 aa  746    Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A2619  1-deoxy-D-xylulose-5-phosphate synthase  59.28 
 
 
645 aa  741    Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.0887721  n/a   
 
 
-
 
NC_007778  RPB_4460  1-deoxy-D-xylulose-5-phosphate synthase  61.66 
 
 
638 aa  778    Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007794  Saro_0161  1-deoxy-D-xylulose-5-phosphate synthase  61.86 
 
 
640 aa  784    Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_0088  1-deoxy-D-xylulose-5-phosphate synthase  63.85 
 
 
639 aa  815    Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_0170  1-deoxy-D-xylulose-5-phosphate synthase  100 
 
 
636 aa  1289    Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_1149  1-deoxy-D-xylulose-5-phosphate synthase  61.22 
 
 
641 aa  775    Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_4826  1-deoxy-D-xylulose-5-phosphate synthase  61.56 
 
 
658 aa  756    Methylobacterium populi BJ001  Bacteria  normal  0.459633  normal  0.588192 
 
 
-
 
NC_007958  RPD_4305  1-deoxy-D-xylulose-5-phosphate synthase  61.98 
 
 
638 aa  780    Rhodopseudomonas palustris BisB5  Bacteria  normal  0.302176  normal  0.192366 
 
 
-
 
NC_009049  Rsph17029_1897  1-deoxy-D-xylulose-5-phosphate synthase  71.2 
 
 
648 aa  919    Rhodobacter sphaeroides ATCC 17029  Bacteria  decreased coverage  0.00653181  normal  0.596808 
 
 
-
 
NC_007964  Nham_0778  1-deoxy-D-xylulose-5-phosphate synthase  59.81 
 
 
668 aa  763    Nitrobacter hamburgensis X14  Bacteria  normal  0.324929  n/a   
 
 
-
 
NC_008044  TM1040_2920  1-deoxy-D-xylulose-5-phosphate synthase  65.05 
 
 
645 aa  849    Ruegeria sp. TM1040  Bacteria  normal  normal  0.922761 
 
 
-
 
NC_008048  Sala_2354  1-deoxy-D-xylulose-5-phosphate synthase  62.66 
 
 
642 aa  797    Sphingopyxis alaskensis RB2256  Bacteria  normal  0.533243  normal  0.0503027 
 
 
-
 
NC_011894  Mnod_6796  1-deoxy-D-xylulose-5-phosphate synthase  61.74 
 
 
665 aa  754    Methylobacterium nodulans ORS 2060  Bacteria  normal  0.180655  n/a   
 
 
-
 
NC_008254  Meso_0735  1-deoxy-D-xylulose-5-phosphate synthase  61.77 
 
 
650 aa  791    Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_3294  1-deoxy-D-xylulose-5-phosphate synthase  65.1 
 
 
643 aa  833    Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_009428  Rsph17025_2027  1-deoxy-D-xylulose-5-phosphate synthase  70.88 
 
 
648 aa  917    Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.0722813  normal  0.799434 
 
 
-
 
NC_010511  M446_6391  1-deoxy-D-xylulose-5-phosphate synthase  61.28 
 
 
663 aa  740    Methylobacterium sp. 4-46  Bacteria  normal  normal  0.144066 
 
 
-
 
NC_010172  Mext_1939  1-deoxy-D-xylulose-5-phosphate synthase  61.41 
 
 
657 aa  756    Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_2479  1-deoxy-D-xylulose-5-phosphate synthase  61.21 
 
 
641 aa  778    Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009484  Acry_1833  1-deoxy-D-xylulose-5-phosphate synthase  61.15 
 
 
647 aa  758    Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_7141  1-deoxy-D-xylulose-5-phosphate synthase  62.8 
 
 
654 aa  754    Methylobacterium nodulans ORS 2060  Bacteria  normal  0.994117  n/a   
 
 
-
 
NC_011369  Rleg2_0564  1-deoxy-D-xylulose-5-phosphate synthase  60 
 
 
638 aa  756    Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_008347  Mmar10_0849  1-deoxy-D-xylulose-5-phosphate synthase  64.64 
 
 
643 aa  805    Maricaulis maris MCS10  Bacteria  normal  normal  0.313067 
 
 
-
 
NC_009505  BOV_0443  1-deoxy-D-xylulose-5-phosphate synthase  61.08 
 
 
643 aa  758    Brucella ovis ATCC 25840  Bacteria  normal  0.580074  n/a   
 
 
-
 
NC_009667  Oant_0547  1-deoxy-D-xylulose-5-phosphate synthase  60.41 
 
 
638 aa  767    Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_3314  1-deoxy-D-xylulose-5-phosphate synthase  60.1 
 
 
638 aa  751    Caulobacter sp. K31  Bacteria  normal  normal  0.855639 
 
 
-
 
NC_008686  Pden_0400  1-deoxy-D-xylulose-5-phosphate synthase  66.61 
 
 
640 aa  851    Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.382014 
 
 
-
 
NC_010725  Mpop_1830  1-deoxy-D-xylulose-5-phosphate synthase  61.88 
 
 
660 aa  763    Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_009356  OSTLU_48774  1-deoxy-D-xylulose-5-phosphate synthase plastid precursor  52.58 
 
 
746 aa  666    Ostreococcus lucimarinus CCE9901  Eukaryota  normal  0.284634  n/a   
 
 
-
 
NC_007517  Gmet_2822  1-deoxy-D-xylulose-5-phosphate synthase  51.76 
 
 
635 aa  607  9.999999999999999e-173  Geobacter metallireducens GS-15  Bacteria  normal  0.553695  normal  0.10664 
 
 
-
 
NC_008752  Aave_2015  1-deoxy-D-xylulose-5-phosphate synthase  52.88 
 
 
622 aa  604  1.0000000000000001e-171  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0928222  hitchhiker  0.00382162 
 
 
-
 
NC_008576  Mmc1_1048  1-deoxy-D-xylulose-5-phosphate synthase  51.43 
 
 
622 aa  600  1e-170  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_007347  Reut_A0882  1-deoxy-D-xylulose-5-phosphate synthase  51.81 
 
 
638 aa  595  1e-169  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_0956  1-deoxy-D-xylulose-5-phosphate synthase  51.19 
 
 
629 aa  597  1e-169  Acidovorax ebreus TPSY  Bacteria  normal  0.922207  n/a   
 
 
-
 
NC_008825  Mpe_A2631  1-deoxy-D-xylulose-5-phosphate synthase  50.63 
 
 
631 aa  596  1e-169  Methylibium petroleiphilum PM1  Bacteria  normal  0.898306  normal 
 
 
-
 
NC_007948  Bpro_1747  1-deoxy-D-xylulose-5-phosphate synthase  53.35 
 
 
635 aa  598  1e-169  Polaromonas sp. JS666  Bacteria  normal  normal  0.123274 
 
 
-
 
NC_009253  Dred_1078  deoxyxylulose-5-phosphate synthase  49.84 
 
 
635 aa  596  1e-169  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0303047  n/a   
 
 
-
 
NC_002939  GSU0686  1-deoxy-D-xylulose-5-phosphate synthase  50.49 
 
 
637 aa  592  1e-168  Geobacter sulfurreducens PCA  Bacteria  normal  0.351489  n/a   
 
 
-
 
NC_007298  Daro_3061  1-deoxy-D-xylulose-5-phosphate synthase  51.95 
 
 
618 aa  593  1e-168  Dechloromonas aromatica RCB  Bacteria  hitchhiker  0.004887  hitchhiker  0.00000111191 
 
 
-
 
NC_004578  PSPTO_0698  deoxyxylulose-5-phosphate synthase  49.45 
 
 
631 aa  589  1e-167  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_2033  1-deoxy-D-xylulose-5-phosphate synthase  50.86 
 
 
636 aa  588  1e-167  Ralstonia pickettii 12D  Bacteria  normal  0.720268  normal 
 
 
-
 
NC_009439  Pmen_3844  1-deoxy-D-xylulose-5-phosphate synthase  49.44 
 
 
631 aa  588  1e-167  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_2133  1-deoxy-D-xylulose-5-phosphate synthase  50.89 
 
 
614 aa  589  1e-167  Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.000520629  normal 
 
 
-
 
NC_007973  Rmet_2615  1-deoxy-D-xylulose-5-phosphate synthase  51.03 
 
 
637 aa  590  1e-167  Cupriavidus metallidurans CH34  Bacteria  normal  0.0207867  normal  0.922526 
 
 
-
 
NC_002947  PP_0527  1-deoxy-D-xylulose-5-phosphate synthase  49.68 
 
 
631 aa  587  1e-166  Pseudomonas putida KT2440  Bacteria  normal  0.384835  normal 
 
 
-
 
NC_008781  Pnap_1501  1-deoxy-D-xylulose-5-phosphate synthase  51.99 
 
 
636 aa  587  1e-166  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_3948  1-deoxy-D-xylulose-5-phosphate synthase  50.56 
 
 
632 aa  585  1e-166  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_0604  1-deoxy-D-xylulose-5-phosphate synthase  48.73 
 
 
630 aa  587  1e-166  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.390731 
 
 
-
 
NC_010501  PputW619_0579  1-deoxy-D-xylulose-5-phosphate synthase  49.52 
 
 
631 aa  586  1e-166  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_007498  Pcar_1667  1-deoxy-D-xylulose-5-phosphate synthase  50.48 
 
 
634 aa  588  1e-166  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00000640226  n/a   
 
 
-
 
NC_010676  Bphyt_6781  1-deoxy-D-xylulose-5-phosphate synthase  50.88 
 
 
653 aa  585  1e-166  Burkholderia phytofirmans PsJN  Bacteria  normal  0.772471  hitchhiker  0.0000939262 
 
 
-
 
NC_007614  Nmul_A0236  1-deoxy-D-xylulose-5-phosphate synthase  50.24 
 
 
614 aa  586  1e-166  Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.947213  n/a   
 
 
-
 
NC_007908  Rfer_2875  1-deoxy-D-xylulose-5-phosphate synthase  51.53 
 
 
632 aa  588  1e-166  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B2827  1-deoxy-D-xylulose-5-phosphate synthase  51.04 
 
 
635 aa  585  1e-166  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_0561  1-deoxy-D-xylulose-5-phosphate synthase  49.21 
 
 
631 aa  587  1e-166  Pseudomonas putida F1  Bacteria  normal  normal  0.763827 
 
 
-
 
NC_011901  Tgr7_0832  1-deoxy-D-xylulose-5-phosphate synthase  52.07 
 
 
640 aa  587  1e-166  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.111285  n/a   
 
 
-
 
NC_010322  PputGB1_0572  1-deoxy-D-xylulose-5-phosphate synthase  49.52 
 
 
631 aa  585  1e-166  Pseudomonas putida GB-1  Bacteria  normal  normal  0.888062 
 
 
-
 
NC_008835  BMA10229_1706  1-deoxy-D-xylulose-5-phosphate synthase  50.56 
 
 
651 aa  582  1.0000000000000001e-165  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_3373  deoxyxylulose-5-phosphate synthase  51.59 
 
 
639 aa  582  1.0000000000000001e-165  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_009079  BMA10247_A0364  1-deoxy-D-xylulose-5-phosphate synthase  50.56 
 
 
651 aa  582  1.0000000000000001e-165  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II0614  1-deoxy-D-xylulose-5-phosphate synthase  51.04 
 
 
634 aa  583  1.0000000000000001e-165  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008784  BMASAVP1_1512  1-deoxy-D-xylulose-5-phosphate synthase  50.56 
 
 
651 aa  582  1.0000000000000001e-165  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_1571  1-deoxy-D-xylulose-5-phosphate synthase  50.72 
 
 
632 aa  584  1.0000000000000001e-165  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_2426  1-deoxy-D-xylulose-5-phosphate synthase  50.39 
 
 
636 aa  583  1.0000000000000001e-165  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_1038  1-deoxy-D-xylulose-5-phosphate synthase  50.87 
 
 
629 aa  584  1.0000000000000001e-165  Acidovorax sp. JS42  Bacteria  normal  normal  0.151705 
 
 
-
 
NC_010424  Daud_1027  deoxyxylulose-5-phosphate synthase  49.52 
 
 
634 aa  584  1.0000000000000001e-165  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_1774  1-deoxy-D-xylulose-5-phosphate synthase  50.72 
 
 
622 aa  580  1e-164  Thauera sp. MZ1T  Bacteria  normal  0.0951101  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0842  1-deoxy-D-xylulose-5-phosphate synthase  50.56 
 
 
634 aa  581  1e-164  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A2534  1-deoxy-D-xylulose-5-phosphate synthase  50.56 
 
 
634 aa  581  1e-164  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_010552  BamMC406_3776  1-deoxy-D-xylulose-5-phosphate synthase  50.08 
 
 
634 aa  579  1e-164  Burkholderia ambifaria MC40-6  Bacteria  normal  0.495759  normal  0.0534173 
 
 
-
 
NC_009078  BURPS1106A_A2392  1-deoxy-D-xylulose-5-phosphate synthase  50.56 
 
 
634 aa  581  1e-164  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_06530  deoxyxylulose-5-phosphate synthase  47.59 
 
 
636 aa  579  1e-164  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.0000000000553997  n/a   
 
 
-
 
NC_008391  Bamb_3250  1-deoxy-D-xylulose-5-phosphate synthase  50.08 
 
 
646 aa  580  1e-164  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.0235548 
 
 
-
 
NC_008554  Sfum_1418  deoxyxylulose-5-phosphate synthase  49.76 
 
 
646 aa  581  1e-164  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.793105  normal  0.333041 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>