| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_3992 |
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| Symbol | |
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| ID | 6140047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium radiotolerans JCM 2831 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010505 |
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| Strand | + |
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| Start bp | 4241416 |
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| End bp | 4243410 |
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| Gene Length | 1995 bp |
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| Protein Length | 664 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641629703 |
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| Product | 1-deoxy-D-xylulose-5-phosphate synthase |
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| Protein accession | YP_001756649 |
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| Protein GI | 229597238 |
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| COG category | [H] Coenzyme transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1154] Deoxyxylulose-5-phosphate synthase |
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| TIGRFAM ID | [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0302614 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGATTA CCCCCGAGCA GAGTGCACTT CTCGACCGCG TTCCGTCTCC ATCGGCGCTT
CGGCGTCTTC CGGAGTCGGA GCTTCAGGCG GTGGCGGACG CGGTGCGCGC CGAGATGATC
GACGCGGTCT CGATCACCGG CGGCCATCTC GGCTCGGGGC TGGGCGTGGT CGAGCTGACG
GTGGCGCTGC ACCACGTGTT CGACACCCCC GACGACCGCA TCGTCTGGGA CGTCGGCCAC
CAGTGCTACC CCCACAAGAT CCTCACCGAG CGCCGCGACC GGATCCGCAC GCTGCGCCAG
GGCGGCGGCC TGTCGGGCTT CACCAAGCGG AGCGAGAGCG TCTACGATCC CTTCGGCGCC
GCCCACTCCT CGACCTCGAT CTCGGCCGCG CTGGGCATGG CGGTCGCCCG CGACCTCGAC
AACGCCACCG CCAAGCAGAA GGGCGGCGCG CAGAAGCGCC GCAACGCCAT CGCGGTGATC
GGCGACGGCT CGATGTCGGC CGGCATGGCC TACGAGGCCC TCAACAACGC CGGCGCCCTG
CACTCGCGCC TGATCGTCAT CCTCAACGAC AACGACATGT CGATCGCGCC CCCCGTCGGC
GCCATGTCGG CCTACCTCGC AAGGCTGGCG TCGGGCGGCG CCTACCAGTC CCTGCGCGAG
ACCGCCAAGC AGCTCGGCAA GCTCCTGCCC AAGGCGCTCT ACCAGCGCGC CGCCGCGGCC
GAGGAGTACG CCCGCTCGCT GGTGGTCGGC GGCGGCACCA TGTTCGAGGA GATGGGCTTC
CACTACGTCG GCCCGGTCGA CGGGCACAAC CTCGACCACC TGCTGCCGGT GCTCAAGAAC
GTCCGCGACG CCGAGCACGG CCCGATCCTG CTCCACGTCG TCACCCAGAA GGGCAAGGGC
TACGCGCCGG CCGAGGCCTC GGCCGACCGC TACCACGGCG TGGTCAAGTT CGACGTGGTC
TCAGGGATCC AGGCCAAGGC CAAGCCGAAC GCGCCGGCCT ACACGCGGGT GTTCGGCGAG
AGCCTGATCA AGGCGGCCGA CGCCGACGAC AAGGTCGTGG CGATCACCGC CGCCATGCCG
GGCGGGACCG GCATCGACCT GTTCGGCAAG GCGCACCCGG ACAAGACCTT CGACGTGGGC
ATCGCCGAGC AGCACGCGGT GACGTTCGCG GGCGGTCTGG CGACCGAGGG CTACCGGCCG
TTCGTGGCGA TCTACTCGAC CTTCCTGCAG CGGGCCTACG ACCAGGTGGT GCACGACGTG
GCGCTGCAGA ACCTGCCCGT GCGGTTCTGC CTGGACCGGG CGGGCCTGGT CGGCGCGGAC
GGGGCGACGC ACGCGGGCGC GTTCGACCTG GCGTACCTGT GCTGCCTGCC GAACATGACC
GTGATGGCGG CGGCCGACGA GGCCGAGCTG GTGCACATGG TGGCGACCGC CCACGCCCAC
GACACGGGCC CGATCGCGCT GCGCTACCCG CGCGGCGAGG GGGTGGGCGT CGAGCTTCCG
GAGCGGGGCG AGGTCCTGGC GATCGGCAAG GGCCGGGTGG TGCGCCGGGA CGCGGAGGCG
CGGGTGGCGC TCCTGTCGCT CGGCACGCGG CTGGCGGAGG CCTTGAAGGC GGCGGACGCG
CTGGCCGAGC AGGGCGTGGC GGTGACGGTG GCGGACGCGC GGTTCGCCAA GCCGCTGGAC
GAGGCGCTGA TCCTGGATCT GGCGCGCGAC CACGAGGTGC TGATCACGGT GGAGGAGGGC
TCGCGGGGCG GGTTCGGCGC GATGGTGCTG CACCTGCTGG CCGAGCGCGG CGCGCTGGAC
GCGGGCGGCG TGCGGGTGCG GACCATGACG CTGCCGGACG CCTACCAGGA CCACGACAGC
CCGGAGAAGA TGTACGCCGA GGCAGGCCTC GACGCCAAAA CCATCGTCCG GACCGCCCTC
GCCACACTGC CGGCAGAGAC CGCCAAGGCC GAGCCGGCGA GCAACGTCGT GAGCGTGCGC
CGCCGCCCGC GCTGA
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| Protein sequence | MAITPEQSAL LDRVPSPSAL RRLPESELQA VADAVRAEMI DAVSITGGHL GSGLGVVELT
VALHHVFDTP DDRIVWDVGH QCYPHKILTE RRDRIRTLRQ GGGLSGFTKR SESVYDPFGA
AHSSTSISAA LGMAVARDLD NATAKQKGGA QKRRNAIAVI GDGSMSAGMA YEALNNAGAL
HSRLIVILND NDMSIAPPVG AMSAYLARLA SGGAYQSLRE TAKQLGKLLP KALYQRAAAA
EEYARSLVVG GGTMFEEMGF HYVGPVDGHN LDHLLPVLKN VRDAEHGPIL LHVVTQKGKG
YAPAEASADR YHGVVKFDVV SGIQAKAKPN APAYTRVFGE SLIKAADADD KVVAITAAMP
GGTGIDLFGK AHPDKTFDVG IAEQHAVTFA GGLATEGYRP FVAIYSTFLQ RAYDQVVHDV
ALQNLPVRFC LDRAGLVGAD GATHAGAFDL AYLCCLPNMT VMAAADEAEL VHMVATAHAH
DTGPIALRYP RGEGVGVELP ERGEVLAIGK GRVVRRDAEA RVALLSLGTR LAEALKAADA
LAEQGVAVTV ADARFAKPLD EALILDLARD HEVLITVEEG SRGGFGAMVL HLLAERGALD
AGGVRVRTMT LPDAYQDHDS PEKMYAEAGL DAKTIVRTAL ATLPAETAKA EPASNVVSVR
RRPR
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