| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_1289 |
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| Symbol | |
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| ID | 6974694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | + |
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| Start bp | 1435223 |
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| End bp | 1437337 |
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| Gene Length | 2115 bp |
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| Protein Length | 704 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643390818 |
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| Product | 1-deoxy-D-xylulose-5-phosphate synthase |
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| Protein accession | YP_002275686 |
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| Protein GI | 209543457 |
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| COG category | [H] Coenzyme transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1154] Deoxyxylulose-5-phosphate synthase |
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| TIGRFAM ID | [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCAGC CGAATCCCAC ACAGCCCACC GGCCTGTCGG CAATCGCGGC GGTCCCCGCC
GAACGAAAGA CGGATGGCCG GCAGCGGGAT GGGCGGCATG ACGCACAGCC GGGGGGCTCG
GTTCCGACGC GTGGCCGCTT TCCGCTGCTG GACCGGGTGG CGTATCCCGA GGACCTGCGG
AACCTGTCGG TGGAGCAGCT GAAGCAGCTG GCCGAGGAAT TGCGGGCCGA GACGGTGGAC
GCGGTATCCA CCACCGGCGG GCACCTGGGC GCGTCGCTGG GCGTGGTGGA GCTGACGGTG
GCGCTGCACG CGGTGTTCGA CACCCCGGCC GACCGGGTGA TCTGGGATGT CGGCCACCAG
GCCTATCCGC ACAAGATCCT GACCGGACGG CGCGAGCGCA TCCGCACCCT GCGCCAGCCC
GGCGGCCTGT CGGGCTTCAC CCGCCGGTGC GAGAGCGAAT ACGACCCGTT CGGCGCCGCC
CATTCCTCGA CCTCGATCTC CGCCGGGCTG GGCATGGCGG TGGCGCACCA CCTGCGCGCC
GAGCACGACC CCGCCTATCG CGAGCGCAAC GTCGTCGCCG TCATCGGTGA CGGCTCGATT
TCCGCCGGCA TGGCCTACGA GGCGATGAAC AACGCCTCGG TCGCCGGCCC CGGCGCCGGG
CGGCTGATCG TGGTGCTGAA CGACAACGAG ATGTCGATCG CGCCCCCGGT CGGCGCCATG
TCCAACTACC TGTCGCGGCT GATGTCCTCG CGCCAGTTCC TCGGCCTGCG CGACCTGGCC
GGCAAGGTGG CCCGCCGCCT GCCCGAGCGG CTGGAGCGCA CCGCCAAGAA GGCCGATGAA
TATGCCCGCG GCATGATCAC CGGCGGCACC CTGTTCGAGG AGCTGGGCTT CTACTACGTC
GGCCCGGTCG ACGGCCACGA CCTGAACCAG CTGGTGCCGA TCCTGCGCAA CCTGCGCGAC
GCCGACGACA AGGGCCCGAT CCTGCTGCAC ATCCTCACCG AGAAGGGACG CGGCTACCGC
CCGGCCGAAT CGGCGGGTGA CAAGTACCAC GCGGTGGCCA AGTTCAACGT GGTGACCGGC
GAGCAGAAGA AGGCCCCGCC GGGACCGCCC AGCTATACCT CGGTGTTCAG CCGCGAGCTG
GTGCGCCGGG CGAAGCAGGA CGACACCCTC GTCGCCGTCA CCGCCGCCAT GCCCTCGGGC
ACCGGGCTGG ACGCCTTCGC CCGCGCCTGC CCCGACCGCT TCTTCGATGT CGGCATCGCC
GAACAGCATG CGGTGACGTT CGCCGCCGGC ATGGCGACCG AAGGGCTGCG GCCGTTCTGC
GCCATCTATT CCACCTTCCT GCAGCGCGCC TACGACCAGG TGATGCATGA CGTGGTGCTG
CAGAACCTGC CGGTGCGCTT CGCCATCGAC CGCGCCGGGC TGGTCGGCGC CGACGGCGCC
ACCCATGCCG GGGCGTTCGA CATCAACTAT CTGGGCTGCC TGCCGGGCAT GACCATCATG
GCCCCCAGCG ACGAGCTGGA ACTGCTGCAC ATGACGGCGA CCGCCTGCGC CTTCGATGCC
GGGCCGATCG CCCTGCGCTA CCCGCGCGGC AACGGGCTGG GCCTGGCGCT GCCCGAGGCC
GGCGAGATCC TGGAGATCGG CCGCGGCCGC ATCATCCGCG AGATGGGCCG CCAGTCGGGG
CGCGAGACCG GCGGTATCGC CATCCTGTCG CTGGGCACCC GCCTGGCCGA GGTGCTGAAG
GCCGCCGACA TGCTGGCCGC CCAGGGGCTG GCCCCCACCG TCGCCGACGC CCGCTTCGCC
AAGCCGCTGG ATACCGCGCT GATCGAGAAC CTGGCCCGCA ACCACGCCGT GCTGCTGACC
ATCGAGGACG GCGCCGAGGG CGGTTTCGGC GCCTATGTCA TGCACCACCT GGCCCGCACC
GGGCTGCTGG ACACCATCCG CTTCCGGCCC ATGACCCTGC CGGACCGCTT CATCGACCAC
AACACCCAGG ACGCCCAATA CCACCAGGCC GGCCTGGACG CCCCAGCCAT CGCCGCATGC
GCCATGCAGG CCCTGGGGAT CGAAAAGACC ATGCCGCAAC CCTTGCTAAA GGCGACAATC
GGACAGAGAT CATGA
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| Protein sequence | MDQPNPTQPT GLSAIAAVPA ERKTDGRQRD GRHDAQPGGS VPTRGRFPLL DRVAYPEDLR
NLSVEQLKQL AEELRAETVD AVSTTGGHLG ASLGVVELTV ALHAVFDTPA DRVIWDVGHQ
AYPHKILTGR RERIRTLRQP GGLSGFTRRC ESEYDPFGAA HSSTSISAGL GMAVAHHLRA
EHDPAYRERN VVAVIGDGSI SAGMAYEAMN NASVAGPGAG RLIVVLNDNE MSIAPPVGAM
SNYLSRLMSS RQFLGLRDLA GKVARRLPER LERTAKKADE YARGMITGGT LFEELGFYYV
GPVDGHDLNQ LVPILRNLRD ADDKGPILLH ILTEKGRGYR PAESAGDKYH AVAKFNVVTG
EQKKAPPGPP SYTSVFSREL VRRAKQDDTL VAVTAAMPSG TGLDAFARAC PDRFFDVGIA
EQHAVTFAAG MATEGLRPFC AIYSTFLQRA YDQVMHDVVL QNLPVRFAID RAGLVGADGA
THAGAFDINY LGCLPGMTIM APSDELELLH MTATACAFDA GPIALRYPRG NGLGLALPEA
GEILEIGRGR IIREMGRQSG RETGGIAILS LGTRLAEVLK AADMLAAQGL APTVADARFA
KPLDTALIEN LARNHAVLLT IEDGAEGGFG AYVMHHLART GLLDTIRFRP MTLPDRFIDH
NTQDAQYHQA GLDAPAIAAC AMQALGIEKT MPQPLLKATI GQRS
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