| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_2795 |
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| Symbol | |
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| ID | 4896646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | - |
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| Start bp | 2943973 |
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| End bp | 2945886 |
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| Gene Length | 1914 bp |
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| Protein Length | 637 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640113397 |
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| Product | 1-deoxy-D-xylulose-5-phosphate synthase |
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| Protein accession | YP_001044669 |
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| Protein GI | 126463555 |
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| COG category | [H] Coenzyme transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1154] Deoxyxylulose-5-phosphate synthase |
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| TIGRFAM ID | [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACA GACCCTGCAC GCCGACGCTC GACCGGGTGA CGCTCCCGGT GGACATGAAG
GGCCTCACGG ACCGTGAGCT GCGCTCGCTG GCCGACGAGC TGCGGGCCGA AACGATCTCG
GCCGTGTCGG TGACGGGCGG GCATCTGGGC GCAGGCCTCG GCGTGGTGGA GCTGACGGTT
GCGCTGCATG CGGTCTTCGA TGCGCCCCGC GACAAGATCA TCTGGGACGT CGGCCACCAG
TGCTACCCCC ACAAGATCCT GACCGGGCGG CGCGACCGCA TCCGCACCCT GCGGCAGGGC
GGGGGTCTCT CGGGCTTCAC CAAGCGCTCC GAGAGCCCCT ACGACTGTTT CGGTGCGGGC
CATTCCTCGA CCTCGATCTC GGCCGCGGTG GGCTTTGCCG CGGCGCGCGA GATGGGCGGC
GACACGGGCG ACGCGGTGGC GGTGATCGGC GATGGCTCGA TGTCGGCCGG CATGGCCTTC
GAGGCGCTGA ACCACGGCGG GCACCTGAAG AACCGGGTGA TCGTGATCCT GAACGACAAC
GAGATGAGCA TCGCGCCGCC GGTGGGGGCG CTGTCGTCCT ATCTCTCGCG GCTTTATGCC
GGCGCGCCGT TCCAGGACTT CAAGGCGGCC GCCAAGGGAG CGCTCGGGCT TCTGCCCGAA
CCGTTCCAGG AGGGCGCGCG CCGCGCCAAG GAGATGCTGA AGAGCGTCAC CGTCGGCGGC
ACGCTCTTCG AGGAGCTGGG TTTCTCCTAT GTCGGCCCGA TCGACGGGCA CGATCTCGAC
CAGCTTCTGC CGGTGCTGCG GACCGTCAAG CAGCGGGCAC ATGCGCCGGT GCTGATCCAT
GTCATCACCA AGAAGGGCAG GGGCTATGCC CCGGCCGAGG CCGCGCGCGA CCGCGGCCAT
GCCACGAACA AGTTCAACGT CCTGACCGGC GCGCAGGTGA AGCCGGTCTC GAACGCCCCC
TCCTACACCA AGGTCTTCGC CCAGAGCCTC ATCAAGGAGG CCGAGGTCGA CGAGCGGATC
TGCGCGGTGA CGGCCGCCAT GCCGGACGGG ACGGGGCTCA ACCTCTTCGG CGAGCGGTTT
CCGAAGCGCA CCTTCGACGT GGGCATCGCG GAACAGCATG CGGTGACCTT CTCGGCGGCG
CTTGCGGCAG GCGGCATGCG GCCCTTCTGC GCGATCTATT CCACCTTCCT CCAGCGCGGC
TACGACCAGA TCGTCCATGA CGTGGCGATC CAGCGCCTGC CGGTGCGCTT TGCCATCGAC
CGCGCGGGCC TCGTGGGGGC GGACGGCGCC ACCCATGCGG GCTCGTTCGA CGTGGCCTTC
CTGTCGAACC TGCCCGGCAT CGTGGTGATG GCCGCCGCCG ACGAGGCCGA GCTCGTCCAT
ATGGTGGCCA CCGCCGCCGC CCATGACGAA GGGCCCATCG CCTTCCGCTA CCCGCGCGGC
GACGGCGTGG GGGTCGAGAT GCCGGCCAAG GGCGTGCCGC TCCAGATCGG CCGCGGCCGG
GTGGTGCGTG AGGGCACGCG AATCGCGCTC CTGTCCTTCG GCACCCGTCT GGCCGAGGTG
CAGGTGGCCG CCGAAGCGCT GGCGGCGCGC GGGATCTCTC CCACGGTCGC CGATGCGCGC
TTTGCAAAGC CGCTCGACCG GGATCTGATC CTGCAGCTCG CGGCCCATCA CGAGGCGCTT
ATCACCATCG AGGAGGGCGC CATCGGCGGC TTCGGCAGCC ATGTGGCGCA GCTTCTGGCC
GAGGCCGGGG TCTTCGACCG CGGCTTCCGG TATCGCTCGA TGGTGCTGCC CGACACGTTC
ATCGACCACA ACAGCGCCGA AGTGATGTAT GCCACCGCCG GGCTGAATGC GGCCGACATC
GAGCGGAAGG CGCTGGAGAC GCTGGGGGTG GAGGTCCTCG CCCGCCGCGC CTGA
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| Protein sequence | MTDRPCTPTL DRVTLPVDMK GLTDRELRSL ADELRAETIS AVSVTGGHLG AGLGVVELTV
ALHAVFDAPR DKIIWDVGHQ CYPHKILTGR RDRIRTLRQG GGLSGFTKRS ESPYDCFGAG
HSSTSISAAV GFAAAREMGG DTGDAVAVIG DGSMSAGMAF EALNHGGHLK NRVIVILNDN
EMSIAPPVGA LSSYLSRLYA GAPFQDFKAA AKGALGLLPE PFQEGARRAK EMLKSVTVGG
TLFEELGFSY VGPIDGHDLD QLLPVLRTVK QRAHAPVLIH VITKKGRGYA PAEAARDRGH
ATNKFNVLTG AQVKPVSNAP SYTKVFAQSL IKEAEVDERI CAVTAAMPDG TGLNLFGERF
PKRTFDVGIA EQHAVTFSAA LAAGGMRPFC AIYSTFLQRG YDQIVHDVAI QRLPVRFAID
RAGLVGADGA THAGSFDVAF LSNLPGIVVM AAADEAELVH MVATAAAHDE GPIAFRYPRG
DGVGVEMPAK GVPLQIGRGR VVREGTRIAL LSFGTRLAEV QVAAEALAAR GISPTVADAR
FAKPLDRDLI LQLAAHHEAL ITIEEGAIGG FGSHVAQLLA EAGVFDRGFR YRSMVLPDTF
IDHNSAEVMY ATAGLNAADI ERKALETLGV EVLARRA
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