Gene Msil_0717 details

Gene Information

• Locus tag: Msil_0717
• ID: 7091949
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylocella silvestris BL2
• Kingdom: Bacteria
• Replicon accession: NC_011666
• Strand: +
• Start bp: 787591
• End bp: 789519
• Gene Length: 1929 bp
• Protein Length: 642 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 643464053
• Product: 1-deoxy-D-xylulose-5-phosphate synthase
• Protein accession: YP_002361050
• Protein GI: 217976903
• COG category: [H] Coenzyme transport and metabolism; [I] Lipid transport and metabolism
• COG ID: [COG1154] Deoxyxylulose-5-phosphate synthase
• TIGRFAM ID: [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 48
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGACGACTT CCTCGACCCC CCTGCTCGAC AAGATCCACA CGCCGGCCGA TTTGCGGCGG 
CTGCCGGAGT CAGATCTCGC GGAGGTCGCG CGCCAGCTGC GCGAAGAAAC GATCAGCGCG 
GTGTCGGTGA CGGGCGGCCA TCTGGGCGCA GGGCTCGGCG TCGTCGAACT CACCGTGGCG 
CTGCATTATG TGTTCAATAC GCCCGACGAT CGGCTGATCT GGGACGTCGG CCATCAGGCC 
TATCCGCACA AGATCATCAC CGGCCGCAGA GACCGCATCC GGACGCTGCG CCGCGGCGGG 
GGCCTCTCCG GCTTCACCCG GCGCTCCGAG AGCGAATACG ACCCTTTCGG CGCGGCGCAT 
TCCTCGACGT CGATTTCGGC CGGCCTCGGC ATGGCGGTCG CCAATACGCT GTCCGGGCGC 
CCCGGCAACG TCATCGCCGT GATCGGCGAT GGCGCGATGT CGGCCGGCAT GGCCTATGAG 
GCCATGAACA ACGCCGGCGC CATGCATTCG CGCCTGATCA TCATTTTAAA CGACAACGAC 
ATGTCGATCG CCCCGCCGGC CGGGGCGCTG TCCTCCTATC TCGCCCGCCT CGTCTCCGGC 
GACGCCTATC GCTCCGTGCG CGAGGCGGCC AAGCAGCTTG GCCGCCTGCT GCCGCGCTTC 
GTCTATGACA GGGCGCGCAA GACTGAGGAA TTCGCCCGCA ATTTCTGGGC GGGCGGCACG 
CTGTTCGAAG AGCTCGGCAT CTATTATGTC GGCCCGATCG ACGGCCACAA CCTCGACCAG 
ATGCTGCCGG TCCTGAAAAA CGTCCGCGAT TTCAAGGAGA CGGGACCGAT CCTCGTCCAT 
GTCGTGACGC AGAAGGGCAA GGGCTACGCG CCCGCCGAGG CGACGCACGA CAAATATCAC 
GCCGTCAATA TGTTCGATGT CGTCACCGGC AAGCAGGTGA AGCCGAAGCC GAATGCGCCG 
GTTTATACCA GCGTCTTCGC CGAATCCCTC GTCAAGGAAG CGGCGAAGGA CGACAAGATC 
GTCGCGATCA CCGCCGCCAT GCCGAGCGGC ACGGGCCTCG ACATTTTTCA AAAGACCTTT 
CCCGAGCGCA CCTTCGACGT CGGCATCGCC GAGCAGCATG CCGTGACCTT CGCCGCCGGC 
CTCGCGACCG AAGGATTCAA GCCGTTCTGC ACGATCTATT CGACGTTCCT GCAGCGCGGC 
TACGATCAAG TCGTGCATGA CGTCGCAATC CAGAACCTGC CGGTGCGCTT TGCGATCGAC 
CGCGCCGGCC TTGTCGGCGC CGACGGCGCG ACGCATGCGG GCTCGTTCGA CATCTCCTTC 
CTCGGCATTC TGCCGAACAT GGTGGTGATG GCGGCCGCCG ACGAATCCGA GCTTGTCCAT 
ATGGTCGCCA CCGCGGCGGC CTATGATGAG GGCCCGATCG CGCTGCGCTA TCCGCGCGGC 
GAAGGCGTCG GCATCGATAT GCCGATCGAA GGCGTCCCGC TCGAGATCGG CCGCGGCCGC 
ATCATGCGCG AGGGCAAGCA GGTCGCCATT CTGTCCTTCG GCGCGCGGCT CGCCGAAGTC 
ATGAAGGCGG CCGACGAACT CGCCGCCCTT GGCGTTTCGA CGACGGTGGC CGACGCGCGC 
TTCGCCAAGC CGCTCGACGA AGAGCTGATC ATGCGGCTTG CCTCCTCCCA TGAAGCGCTG 
ATCACCATCG AGGAAGGCTC GGTCGGCGGC TTCGGGTCCT TCGTTGCGCA AAAGCTGACC 
GACTCAGGCG CGCTTGACGG CCTTGGCGCG CGACCGCTGA AATTCCGTTC AATGGTGCTG 
CCCGACCTGT TCCTCGATCA TGACAAGCCG GAAAAGCTCT ATGCGCAGGC GGGTCTCGAC 
GCGAAGGCGA TCGTCGCCAA GGTGCTTTCG GTTCTCGGGC GCGAGGCGCT CGACGTGAAA 
ATCGCCTGA 

 

Protein sequence

MTTSSTPLLD KIHTPADLRR LPESDLAEVA RQLREETISA VSVTGGHLGA GLGVVELTVA 
LHYVFNTPDD RLIWDVGHQA YPHKIITGRR DRIRTLRRGG GLSGFTRRSE SEYDPFGAAH 
SSTSISAGLG MAVANTLSGR PGNVIAVIGD GAMSAGMAYE AMNNAGAMHS RLIIILNDND 
MSIAPPAGAL SSYLARLVSG DAYRSVREAA KQLGRLLPRF VYDRARKTEE FARNFWAGGT 
LFEELGIYYV GPIDGHNLDQ MLPVLKNVRD FKETGPILVH VVTQKGKGYA PAEATHDKYH 
AVNMFDVVTG KQVKPKPNAP VYTSVFAESL VKEAAKDDKI VAITAAMPSG TGLDIFQKTF 
PERTFDVGIA EQHAVTFAAG LATEGFKPFC TIYSTFLQRG YDQVVHDVAI QNLPVRFAID 
RAGLVGADGA THAGSFDISF LGILPNMVVM AAADESELVH MVATAAAYDE GPIALRYPRG 
EGVGIDMPIE GVPLEIGRGR IMREGKQVAI LSFGARLAEV MKAADELAAL GVSTTVADAR 
FAKPLDEELI MRLASSHEAL ITIEEGSVGG FGSFVAQKLT DSGALDGLGA RPLKFRSMVL 
PDLFLDHDKP EKLYAQAGLD AKAIVAKVLS VLGREALDVK IA