| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_48774 |
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| Symbol | DXS |
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| ID | 5000134 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ostreococcus lucimarinus CCE9901 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009356 |
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| Strand | + |
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| Start bp | 604826 |
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| End bp | 607185 |
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| Gene Length | 2360 bp |
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| Protein Length | 746 aa |
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| Translation table | |
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| GC content | 52% |
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| IMG OID | 640415555 |
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| Product | 1-deoxy-D-xylulose-5-phosphate synthase plastid precursor |
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| Protein accession | XP_001416190 |
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| Protein GI | 145342439 |
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| COG category | [H] Coenzyme transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1154] Deoxyxylulose-5-phosphate synthase |
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| TIGRFAM ID | [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.284634 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TATCCTATAT CGTGCCGACA GGAGCGTACT GCGTCTAAGC TTAGGGACAG TGTTGCGAGC
GCGCATTACG GCAATCACAC GTAGCGTTGC TCGTCAAAAT AGCAGCACGC GATGTACACG
TCTTCAACTC GACTGGCACT GGCTCAAAAC CTCAACCAGA CTCGAGTCGC GCGCCCGCGA
TGTGCTGGGG GGCACGGACG AAACGCCGAC AGTCTTCGCC CCGTGATTAC GCGAAAATTG
AGCGCACGTG CGCGTAATGG GCGCTCAGGC ACACGGTTCG TGCCAAATCG TGGTTCTGAG
CAGGATATCT TATCTGAACT TGAAGAAGCG CAAGAAGGAG GAATTGCTGG CTACGGCGTC
ATCTCGTCCA AACCTACGAC ACCCCTTTTG GATACCGTGC AGTTTCCGAG CCATTTGAAG
GGTTTAAACA TGGATCAACT CAAGCAAGTC GCGAAAGAAC TACGTGCAGA CCTAATCTAC
AACGTATCTC AGACAGGAGG GCATCTTGGT TCGAGCCTCG GAGTTATTGA GCTCACCGTC
GCACTCAATT ACGTATTCGA CCAACCGAAC GACAAAATCA TATGGGACGT GGGGCATCAA
GCTTACCCTC ACAAAATTTT GACGGGAAGG AGGGACCAAA TGAACACCAT GAGACAAACA
GGCGGGTTAT CACCTTTCAC GAAGAGAAGC GAAAGTCCTT ATGACTGCTT TGGGGCGGGA
CACAGTAGTA CGTCCATTTC GGCAGGTCTT GGAATGGCTG TCGCTCGGGA TATGCAAGGC
GGCGATAATC ATGTCATCAG CATAATCGGA GACGGGGCAA TCACGGGGGG GATGGCGTAT
GAAGCTATGA ACAATGCTGG ATTTCTGGAC ACGAACATGA TCATCATCTT AAATGATAAC
CAGCAAGTGT CGCTTCCTAC GCAATACAAC AGTATGAATC AAGATCCAGT GGGTGCGCTT
TCGTCGACAT TCGCTCGTCT TCAGTCGTCG CGCCCTCTAC GCGAGTTGCG CGAGTCTGCC
AAGGCGATTA CCAAACAGAT GCCAACCCCT GTGCAAGAGG TCACCGCAAA AGTTGACGAG
TATGCGCGTG GTATGATTAG TGGATCTGGC TCGACTCTAT TTGAAGAGCT CGGACTATAT
TACATCGGAA CTGTTGATGG GCATAATTTG GAGGATTTGG TCGCCATTCT GCAAGAAGTA
AAAGAGACAA AGAGCGTTGG TCCCGTGTTG ATTCACATCG TGACCGAGAA GGGCCGAGGC
TACTCTTATG CCGAAGACGC TCAAGACAAG TACCACGGTG TATCCAAATT CGATCTCGCT
TCCGGTGAAC AAAGCAAATC AACAGATACA ATCCCCACTT ACACGAAGGT GTTCGCCGAT
GCCTTGATTG GAGAAGCCAT GGCTGATGAA AAGGTTGTGG CCGTGCACGC TGCCATGGGC
GGGGGAACGG GATTAAACCA TTTCGAGAAA TATTTCGCCG ATAGAACGTA CGACGTCGGC
ATTGCGGAGC AACATGCCGT GACTTTCGCT GCGGGTCTTG CATGTGAGGG ATTGAAACCC
ATGTGTACGA TTTATTCAAC ATTTTTGCAA CGTGGCTGGG ATCAAGTTGT TCACGACGTA
GCGCTGCAGA AACTTCCGGT GAGGTTTGCG ATGGACCGTG CTGGCTTGGT TGGCGCGGAT
GGACCAACTC ATGCTGGTGC GTACGATGTG ACGTTCATGG CGTGCCTTCC CGATATGGTC
GTTATGGCGC CGATGGACGA GGCAGAGCTG TGTCATATGG TTGCAACATC TTTAGCTATT
GACGATCGTC CCTCCTGTTT CCGCTATCCT CGGGGTGCGG GCGTTGGGGT CAACATGGAA
AATGAGAGCG TCAAAGTGCT CAATCCAGGA TACAAGGGTA TGGTGTTAGA CATTGGGAAA
GGCCGAGTTC TACGCGAAGG AACCGATGTC GTTCTGTTGG GTTATGGTAC TCCAACGAAT
AACTGTTTGC TGGCTGCCCA AATGTTGCAA GAGTTCGGCG TCAGCGCCAC CGTGGCGGAT
GCTCGATTCT GCAAACCTCT GGACGTCGAA CTCATTCGTC GCTTGGCAAA ATCACACCCA
GTTTTCATAA CGGTAGAGGA AGGTTCCATA GGCGGCTTTG CGTCTCACGT GTTGCACTTC
CTAGCGACTG ACGGACTGCT CGACGGCGGC TTGAAGGTTC GACCAATGGT ACTTCCCGAT
CGTCCAATTG ATCACGGTTC GTATGCATTC CAGCTTAACG AGGCTGGACT TAGCGTTTCG
CACATCGCAT CTACGGCGCT TTCGCTTGTC GGGAAGCAAA ATGAGTCTCT CGAGGTTTTA
GCAAGAGTCT AGAGAAACTT
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| Protein sequence | MYTSSTRLAL AQNLNQTRVA RPRCAGGHGR NADSLRPVIT RKLSARARNG RSGTRFVPNR
GSEQDILSEL EEAQEGGIAG YGVISSKPTT PLLDTVQFPS HLKGLNMDQL KQVAKELRAD
LIYNVSQTGG HLGSSLGVIE LTVALNYVFD QPNDKIIWDV GHQAYPHKIL TGRRDQMNTM
RQTGGLSPFT KRSESPYDCF GAGHSSTSIS AGLGMAVARD MQGGDNHVIS IIGDGAITGG
MAYEAMNNAG FLDTNMIIIL NDNQQVSLPT QYNSMNQDPV GALSSTFARL QSSRPLRELR
ESAKAITKQM PTPVQEVTAK VDEYARGMIS GSGSTLFEEL GLYYIGTVDG HNLEDLVAIL
QEVKETKSVG PVLIHIVTEK GRGYSYAEDA QDKYHGVSKF DLASGEQSKS TDTIPTYTKV
FADALIGEAM ADEKVVAVHA AMGGGTGLNH FEKYFADRTY DVGIAEQHAV TFAAGLACEG
LKPMCTIYST FLQRGWDQVV HDVALQKLPV RFAMDRAGLV GADGPTHAGA YDVTFMACLP
DMVVMAPMDE AELCHMVATS LAIDDRPSCF RYPRGAGVGV NMENESVKVL NPGYKGMVLD
IGKGRVLREG TDVVLLGYGT PTNNCLLAAQ MLQEFGVSAT VADARFCKPL DVELIRRLAK
SHPVFITVEE GSIGGFASHV LHFLATDGLL DGGLKVRPMV LPDRPIDHGS YAFQLNEAGL
SVSHIASTAL SLVGKQNESL EVLARV
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