Gene BTH_II0614 details

Gene Information

• Locus tag: BTH_II0614
• Symbol: dxs
• ID: 3845684
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia thailandensis E264
• Kingdom: Bacteria
• Replicon accession: NC_007650
• Strand: +
• Start bp: 717219
• End bp: 719123
• Gene Length: 1905 bp
• Protein Length: 634 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 637837919
• Product: 1-deoxy-D-xylulose-5-phosphate synthase
• Protein accession: YP_438814
• Protein GI: 83717976
• COG category: [H] Coenzyme transport and metabolism; [I] Lipid transport and metabolism
• COG ID: [COG1154] Deoxyxylulose-5-phosphate synthase
• TIGRFAM ID: [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTACGACT TGCTGAAAAC CATCGACGAC CCGGCGGACC TGCGCCGTCT CGATCGTCGC 
CAACTGCAGC CGCTCGCCGA CGAGCTGCGC GCGTTCGTTC TCGACAGCGT GTCGAAGACG 
GGCGGCCATT TGTCGTCCAA TCTCGGCACG GTCGAGCTGA CGATCGCGCT GCATTACGTG 
TTCAACACGC CGGACGACCG GATCGTGTGG GACGTCGGTC ACCAGACCTA TCCGCACAAG 
ATCCTGACGG GCCGCCGCGA CGGGATGAAG ACGCTGCGCC AGTTCGACGG CATCTCGGGC 
TTTCCGCGCC GCTCGGAATC CGAATACGAC ACGTTCGGCA CCGCGCACTC GAGCACGTCG 
ATCTCGGCTG CGCTCGGGAT GGCGATCGGC AGCAAGCTGA ACGGCGACGA CCGCTTCTCG 
ATCGCGGTGA TCGGCGACGG CGCGATGACG GCCGGCATGG CGTTCGAGGC GATGAACAAC 
GCGGGCGTGT CCGAGGACGC GAAGCTCCTC GTGATCCTGA ACGACAACGA CATGTCGATC 
TCGCCGCCCG TCGGCGCGCT GAACCGCCAT CTCGCGCGCC TGATGTCGGG CCGCTTCTAC 
GCGGCCGCGC GCGCGGGCGT CGAACGCGTG CTGAGCGTCG CGCCGCCCGT GCTCGAGCTC 
GCGCGCAAGC TCGAGGAGCA TGCGAAGGGC ATGGTGGTGC CCGCGACGCT CTTCGAGGAA 
TTCGGCTTCA ACTACATCGG GCCGATCGAC GGCCACGATC TCGATTCGCT GATCCCGACG 
CTGCAGAACA TCAAGGAACT GCGCGGCCCG CAGTTCCTGC ACGTCGTGAC GAAGAAGGGA 
CAGGGCTACA AGCTCGCTGA GGCCGATCCG GTGCTCTATC ACGGGCCCGG CAAGTTCAAC 
CCGGCGGAAG GCATCAAGCC GTCCGCGACG CCGGCGAAGA AGACCTACAC GCAGGTATTC 
GGCGAATGGC TGTGCGACGC GGCGGAGCTC GATGCGCGCG TGGTCGGCAT CACGCCCGCG 
ATGCGCGAAG GCTCGGGCAT GGTCGAGTTC GAGAAGCGCT TCCCGGAGCG CTACTACGAC 
GTCGGCATTG CCGAGCAGCA CGCGGTGACG TTCGCGGGCG GCCTCGCGAC GGAAGGGCTC 
AAGCCCGTCG TCGCGATCTA CTCGACTTTC CTGCAGCGCG CCTATGATCA GCTGATTCAC 
GACGTCGCGC TGCAGAACCT GCCCGTCGTG TTCGCGATCG ATCGCGCGGG CCTCGTCGGC 
GCGGACGGCG CGACGCATGC GGGCGCATAC GATCTCGCAT TCCTGCGCTG CATCCCGAAC 
ATGACGGTGA TGGCCGCGTC GGACGAGAAC GAGTGTCGCC AGATGCTGCA CACCGCGCTG 
CAGCAGCCGA ACCCGACCGC GGTCCGTTAT CCGCGCGGCG CAGGCACGGG CGTTGCGACC 
GTCAAGGCGT TCACCGAGAT TCCGCTCGGC AAGGGCGAAG TGCGCCGTCG CACGTCGCAG 
CCGGACGGCA AGCGCGTCGC GATTCTCGCG TTCGGCACGA TGGTCGCGCC GTCGCTTGCG 
GCCGCCGACG CGCTCGACGC GACCGTGGCG AACATGCGTT TCGTGAAGCC GATCGACGCC 
GAGCTCGTTC GAGAGCTCGC GCAGACGCAC GACTACCTCG TCACCGTCGA GGAAGGCTGC 
GTGATGGGCG GCGCGGGCTC CGCGTGCGTC GAGGCGATGA TGGAAGGCGG CGCGGTCCGT 
CCGGTGCTGC AGCTCGGCCT GCCGGACCGC TTCGTCGATC ACGGCGATCC GGCGAAGCTG 
CTTGCGATGT GCGGTCTCGA CGGCGATGGC ATCGCGAAAT CGATTCGCGA GCGCTTCCTG 
AACCACGCGG CGAACGTCGC GAGTCCGGCG AAGCGCGTCG CATAA 

 

Protein sequence

MYDLLKTIDD PADLRRLDRR QLQPLADELR AFVLDSVSKT GGHLSSNLGT VELTIALHYV 
FNTPDDRIVW DVGHQTYPHK ILTGRRDGMK TLRQFDGISG FPRRSESEYD TFGTAHSSTS 
ISAALGMAIG SKLNGDDRFS IAVIGDGAMT AGMAFEAMNN AGVSEDAKLL VILNDNDMSI 
SPPVGALNRH LARLMSGRFY AAARAGVERV LSVAPPVLEL ARKLEEHAKG MVVPATLFEE 
FGFNYIGPID GHDLDSLIPT LQNIKELRGP QFLHVVTKKG QGYKLAEADP VLYHGPGKFN 
PAEGIKPSAT PAKKTYTQVF GEWLCDAAEL DARVVGITPA MREGSGMVEF EKRFPERYYD 
VGIAEQHAVT FAGGLATEGL KPVVAIYSTF LQRAYDQLIH DVALQNLPVV FAIDRAGLVG 
ADGATHAGAY DLAFLRCIPN MTVMAASDEN ECRQMLHTAL QQPNPTAVRY PRGAGTGVAT 
VKAFTEIPLG KGEVRRRTSQ PDGKRVAILA FGTMVAPSLA AADALDATVA NMRFVKPIDA 
ELVRELAQTH DYLVTVEEGC VMGGAGSACV EAMMEGGAVR PVLQLGLPDR FVDHGDPAKL 
LAMCGLDGDG IAKSIRERFL NHAANVASPA KRVA