| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_2792 |
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| Symbol | |
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| ID | 5085145 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | + |
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| Start bp | 2836898 |
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| End bp | 2838811 |
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| Gene Length | 1914 bp |
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| Protein Length | 637 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640484356 |
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| Product | 1-deoxy-D-xylulose-5-phosphate synthase |
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| Protein accession | YP_001168984 |
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| Protein GI | 146278825 |
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| COG category | [H] Coenzyme transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1154] Deoxyxylulose-5-phosphate synthase |
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| TIGRFAM ID | [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.250893 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACA GACCCTGCAC GCCGACGCTC GACCGGGTGA CGCTTCCGGT CGACATGAAG
GGCCTCACGG ACCGTGAGTT GCGCAACCTC GCCGACGAGC TGCGGGCCGA GACCATCTCG
GCCGTGTCGG TGACGGGGGG GCATCTCGGC GCGGGCCTCG GCGTGGTGGA GCTGACCGTC
GCGCTCCATG CGGTCTTCGA CGCGCCGCGC GACAAGATCA TCTGGGATGT GGGGCATCAG
TGCTATCCTC ACAAGATCCT GACCGGCCGG CGCGACCGCA TCCGCACGCT GCGGCAGGGC
GGGGGCCTCT CGGGCTTCAC CAAGCGGTCG GAAAGCCCCT ATGACTGCTT CGGCGCGGGC
CATTCCTCGA CCTCGATCTC GGCCGCGGTG GGCTTTGCCG CCGCGCGCGA GCTGGGCGGC
GACACGGGCG ATGCGGTGGC GATCATCGGC GACGGCTCGA TGTCGGCCGG CATGGCCTTC
GAGGCGCTGA ACCACGGCGG CCACCTGAAG AACCGCGTGA TCGTGATCCT GAACGACAAC
GAGATGAGCA TCGCTCCGCC GGTGGGGGCG CTCTCGTCCT ATCTGTCGCG GCTCTATGCG
GGTGCGCCGT TCCAGGACTT CAAGGCCGCC GCCAAGGGCG CGCTTGGCCT TCTGCCCGAA
CCGTTCCAGG AGGGCGCGCG CCGCGCCAAG GAGATGCTTA AGAGCGTGAC CGTCGGCGGC
ACGCTGTTCG AGGAGTTGGG CTTCTCCTAT GTCGGGCCCA TTGACGGGCA CGATCTCGAC
CAGCTTCTGC CGGTGCTGCG CACGGTCAAG CAACGCGCGA GCGCGCCGGT TCTCATTCAC
GTGATCACGA AGAAGGGCAA AGGCTACGCG CCCGCCGAGG CCGCGCGCGA TCGCGGCCAT
GCCACGAACA AGTTCAACGT CCTGACCGGC GCGCAGGTCA AGCCGGTCTC GAACGCGCCC
TCCTACACCA AGGTCTTCGC CCAGAGCCTC ATCAAGGAGG CCGAGGTGGA CGAGCGCATC
TGCGCCGTGA CCGCCGCCAT GCCGGACGGG ACGGGGCTCA ACCTCTTCGC GGACCGTTTC
CCCAAGCGGA TCTTTGACGT CGGCATCGCC GAGCAGCACG CCGTCACCTT CTCGGCCGGC
CTTGCGGCGG GCGGGATGCG GCCCTTCTGC GCGATCTATT CCACGTTCCT GCAGCGCGGC
TACGACCAGA TCGTGCATGA CGTGGCGATC CAGCGCCTGC CGGTGCGCTT CGCCATCGAC
CGGGCGGGGC TGGTGGGCGC GGACGGCGCC ACCCATGCGG GCTCGTTCGA CGTGGCCTTC
CTGTCGAACC TGCCCGGCAT CGTGGTGATG GCCGCCGCCG ATGAGGCCGA GCTTGTCCAT
ATGGTCGCCA CCGCCGCCGC CCACGACGAG GGGCCCATCG CCTTCCGCTA CCCGCGCGGC
GATGGCGTGG GGGTCGAGAT GCCGGCGAAG GGCGTGCCGC TCCAGATCGG CCGCGGCCGG
GTGGTGAGCG AGGGCACGCG GATCGCGCTC CTGTCCTTCG GCACCCGCCT GTCGGAAGTG
CAGGTGGCCG CCGAGGCGCT GGCGGCGCGC GGGATCTCGC CCACGGTGGC GGATGCACGC
TTTGCCAAGC CGCTCGACCG CGACCTGATC CTGCAGCTGG CCGCCCATCA CGAGGCGCTG
ATCACCATCG AGGAAGGCGC CATCGGCGGC TTCGGCAGCC ATGTGGCGCA GCTTCTGGCC
GAGGCGGGGG TCTTCGACCG CGGCTTCCGC TACCGCTCGA TGGTGCTGCC CGACACGTTC
ATCGACCACA ACAGCGCCGA GGCCATGTAT GCCACGGCGG GCCTGAACGC CGCCGACATC
GAGCGCAAGG CCTTGGAAAC GCTGGGTGTG GAGGTTCTGG CCCGACGCGC CTGA
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| Protein sequence | MTDRPCTPTL DRVTLPVDMK GLTDRELRNL ADELRAETIS AVSVTGGHLG AGLGVVELTV
ALHAVFDAPR DKIIWDVGHQ CYPHKILTGR RDRIRTLRQG GGLSGFTKRS ESPYDCFGAG
HSSTSISAAV GFAAARELGG DTGDAVAIIG DGSMSAGMAF EALNHGGHLK NRVIVILNDN
EMSIAPPVGA LSSYLSRLYA GAPFQDFKAA AKGALGLLPE PFQEGARRAK EMLKSVTVGG
TLFEELGFSY VGPIDGHDLD QLLPVLRTVK QRASAPVLIH VITKKGKGYA PAEAARDRGH
ATNKFNVLTG AQVKPVSNAP SYTKVFAQSL IKEAEVDERI CAVTAAMPDG TGLNLFADRF
PKRIFDVGIA EQHAVTFSAG LAAGGMRPFC AIYSTFLQRG YDQIVHDVAI QRLPVRFAID
RAGLVGADGA THAGSFDVAF LSNLPGIVVM AAADEAELVH MVATAAAHDE GPIAFRYPRG
DGVGVEMPAK GVPLQIGRGR VVSEGTRIAL LSFGTRLSEV QVAAEALAAR GISPTVADAR
FAKPLDRDLI LQLAAHHEAL ITIEEGAIGG FGSHVAQLLA EAGVFDRGFR YRSMVLPDTF
IDHNSAEAMY ATAGLNAADI ERKALETLGV EVLARRA
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