| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A0882 |
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| Symbol | |
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| ID | 3611764 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia eutropha JMP134 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007347 |
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| Strand | + |
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| Start bp | 958926 |
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| End bp | 960842 |
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| Gene Length | 1917 bp |
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| Protein Length | 638 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637690272 |
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| Product | 1-deoxy-D-xylulose-5-phosphate synthase |
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| Protein accession | YP_295105 |
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| Protein GI | 73540585 |
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| COG category | [H] Coenzyme transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1154] Deoxyxylulose-5-phosphate synthase |
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| TIGRFAM ID | [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTACG CACTGCTCAA AAAGATTGAC GCCCCCGCAG ACCTGCGCAA GCTCGACCGG
CGCGAGCTGC GGACACTGGC CGATGAACTT CGCGCCTACG TGCTGGAGTC GGTCTCGCAG
ACCGGCGGCC ACCTCTCGTC GAATCTCGGC ACGGTGGAAC TGACCATCGC GCTGCACTAC
GTATTCCATA CGCCCGACGA CCGTGTCGTC TGGGACGTGG GCCACCAGAG CTATCCGCAC
AAGATCCTGA CGGGCCGGCG CGAGCGCATG AATACGCTGC GCCAGTTCGG CGGCATCTCG
GGCTTCCCGC GCCGCAGCGA AAGCCAGTAC GACACTTTCG GTACCGCGCA TTCGTCGACC
TCGATCTCGG CCGCGCTCGG CATGGCGCTG GGCGCGCGCA CGCTCGGCGA GCAGCGCGTG
TCGATCGCCG TGATCGGCGA TGGCGCGATG ACCGCGGGCA TGGCCTTCGA AGCCCTGAAC
AACGCGGGTG TTTACAAGGA CCTGCCGCTG GTGGTCGTGC TCAACGACAA CGACATGTCG
ATCTCGCCGC CGGTCGGCGC GCTCAACAAG CATCTGGCGC GGCTGCTCAG CGGACAGTTC
TATGCTGCCA CCAAGAAGGG CATCGAGAAG GTGCTGTCGG TGGCCCCGCC GGTGCTCGAA
TTCGCCAAGC GCTTCGAGGA ACACGCCAAG GGCATGATGG TGCCGGCGAC GCTGTTCGAA
GAGTTCGGCT TCAACTACAT CGGCCCCATC GACGGCCACG ACCTCGACTC GCTGGTGCCG
ACGCTGCAGA ACATCCGCAA GCGCGCGCTC GAAGGCGCGG GCCCGCAGTT CCTGCACGTG
GTGACCAAGA AGGGCCAGGG CTACAAGCTG GCCGAGGCCG ACCCGATCCT GTATCACGGC
CCTGGCAAGT TCAACCCGGC CGAAGGCATC CGCCCGGCCG CGAAGCCCGC GCGCAAGACC
TACACGCAGG TCTTCGGTGA ATGGCTGTGC GACATGGCCG CCGCGGACAA GCGCCTGATC
GGCATTACGC CGGCAATGCG CGAAGGCTCG GGCATGGTCG AGTTTGAGAA GCGCTTCCCG
GAGCGCTACT ATGACGTGGG CATCGCCGAG CAGCATGCCG TGACGTTCGC GGGCGGCATG
GCTTGCGAAG GACTGAAGCC CATCGTGGCG ATTTATTCGA CGTTCCTGCA GCGTGGCTAT
GACCAGTTGA TCCACGACGT GGCGCTGCAG AACCTGCCGG TGGTGTTTGC GCTGGACCGC
GCGGGCCTGG TCGGCGCCGA CGGCGCCACG CACGCGGGTG CCTACGATAT CGCCTACCTG
CGCTGCATCC CCAACATGAT GGTGATGACG CCGTCCGACG AGAACGAGTG CCGTCAGTTG
CTGACGACCG CGTTCCACCA GAACTGCCCG ACTGCCGTGC GCTATCCGCG CGGCGCTGGC
CAGGGTGTGG CGACGGAAGC TGTACTGAAG GATGTGCCGG TGGGCAAGGG CGTGATGCGC
CGTACGGGCG GCGCACGCTC GGGCCAGCGC GTGGCGTTCC TGGGTTTTGG TTCGATGGTG
CACCCGGCGC TTGGCGCGGC GCAGGCGCTC GACGCCTCGG TGGCGGACAT GCGCTTCGTC
AAGCCGCTCG ACGTTGAACT CGTCAAGCGA CTGGCGGAGG AGCACAACTA CCTCGTGACC
GTGGAAGAGG GCAGTGTCAT GGGCGGTGCT GGCAGTGCCG TGCTGGAAGC GCTGGCGGAA
GCGGGCATCG ACATCCCGGT ACTCGTGCTG GGCCTGCCCG ACCGCTTCAT CGACCATGGC
GATCCAGCCC TGCTGCTGTC GCAGTGCGGG CTCGACGCCG CCGGCATCGA GCGCTCGGTA
CGTGAGCGTT TCGGCATCGG CCAGGCACCC GTCGCGGTTG CTTCTCGCGT GGCCTGA
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| Protein sequence | MTYALLKKID APADLRKLDR RELRTLADEL RAYVLESVSQ TGGHLSSNLG TVELTIALHY
VFHTPDDRVV WDVGHQSYPH KILTGRRERM NTLRQFGGIS GFPRRSESQY DTFGTAHSST
SISAALGMAL GARTLGEQRV SIAVIGDGAM TAGMAFEALN NAGVYKDLPL VVVLNDNDMS
ISPPVGALNK HLARLLSGQF YAATKKGIEK VLSVAPPVLE FAKRFEEHAK GMMVPATLFE
EFGFNYIGPI DGHDLDSLVP TLQNIRKRAL EGAGPQFLHV VTKKGQGYKL AEADPILYHG
PGKFNPAEGI RPAAKPARKT YTQVFGEWLC DMAAADKRLI GITPAMREGS GMVEFEKRFP
ERYYDVGIAE QHAVTFAGGM ACEGLKPIVA IYSTFLQRGY DQLIHDVALQ NLPVVFALDR
AGLVGADGAT HAGAYDIAYL RCIPNMMVMT PSDENECRQL LTTAFHQNCP TAVRYPRGAG
QGVATEAVLK DVPVGKGVMR RTGGARSGQR VAFLGFGSMV HPALGAAQAL DASVADMRFV
KPLDVELVKR LAEEHNYLVT VEEGSVMGGA GSAVLEALAE AGIDIPVLVL GLPDRFIDHG
DPALLLSQCG LDAAGIERSV RERFGIGQAP VAVASRVA
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