More than 300 homologs were found in PanDaTox collection
for query gene Sfum_1418 on replicon NC_008554
Organism: Syntrophobacter fumaroxidans MPOB



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011899  Hore_06530  deoxyxylulose-5-phosphate synthase  55.84 
 
 
636 aa  733    Halothermothrix orenii H 168  Bacteria  hitchhiker  0.0000000000553997  n/a   
 
 
-
 
NC_002939  GSU0686  1-deoxy-D-xylulose-5-phosphate synthase  63.8 
 
 
637 aa  804    Geobacter sulfurreducens PCA  Bacteria  normal  0.351489  n/a   
 
 
-
 
NC_002939  GSU1764  1-deoxy-D-xylulose-5-phosphate synthase  59.09 
 
 
626 aa  749    Geobacter sulfurreducens PCA  Bacteria  normal  0.0479282  n/a   
 
 
-
 
NC_008817  P9515_09901  1-deoxy-D-xylulose-5-phosphate synthase  50.8 
 
 
631 aa  639    Prochlorococcus marinus str. MIT 9515  Bacteria  normal  n/a   
 
 
-
 
NC_008816  A9601_09541  1-deoxy-D-xylulose-5-phosphate synthase  51.71 
 
 
629 aa  645    Prochlorococcus marinus str. AS9601  Bacteria  normal  0.277651  n/a   
 
 
-
 
NC_002977  MCA0817  1-deoxy-D-xylulose-5-phosphate synthase  53.22 
 
 
639 aa  643    Methylococcus capsulatus str. Bath  Bacteria  normal  0.64849  n/a   
 
 
-
 
NC_010320  Teth514_1540  1-deoxy-D-xylulose-5-phosphate synthase  51.13 
 
 
620 aa  645    Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.00810208  n/a   
 
 
-
 
NC_003909  BCE_4249  1-deoxy-D-xylulose-5-phosphate synthase  50.16 
 
 
630 aa  635    Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.0000543695  n/a   
 
 
-
 
NC_009675  Anae109_1136  deoxyxylulose-5-phosphate synthase  52.06 
 
 
635 aa  660    Anaeromyxobacter sp. Fw109-5  Bacteria  normal  hitchhiker  0.00423359 
 
 
-
 
NC_011146  Gbem_3362  1-deoxy-D-xylulose-5-phosphate synthase  59.58 
 
 
635 aa  768    Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007335  PMN2A_0300  1-deoxy-D-xylulose-5-phosphate synthase  51.64 
 
 
628 aa  637    Prochlorococcus marinus str. NATL2A  Bacteria  normal  0.533137  n/a   
 
 
-
 
NC_013411  GYMC61_0251  1-deoxy-D-xylulose-5-phosphate synthase  51.14 
 
 
631 aa  644    Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007404  Tbd_0879  1-deoxy-D-xylulose-5-phosphate synthase  53.07 
 
 
618 aa  635    Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal  0.623076 
 
 
-
 
NC_010424  Daud_1027  deoxyxylulose-5-phosphate synthase  57.7 
 
 
634 aa  738    Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_4532  1-deoxy-D-xylulose-5-phosphate synthase  53.17 
 
 
635 aa  648    Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_1258  1-deoxy-D-xylulose-5-phosphate synthase  59.77 
 
 
646 aa  748    Geobacter bemidjiensis Bem  Bacteria  normal  0.260207  n/a   
 
 
-
 
NC_013525  Tter_1852  deoxyxylulose-5-phosphate synthase  53.92 
 
 
640 aa  675    Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011145  AnaeK_1157  deoxyxylulose-5-phosphate synthase  52.68 
 
 
636 aa  646    Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_1694  1-Deoxy-D-xylulose-5-phosphate synthase  54.57 
 
 
631 aa  698    Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.134316  normal  0.0277937 
 
 
-
 
NC_007498  Pcar_1667  1-deoxy-D-xylulose-5-phosphate synthase  56.3 
 
 
634 aa  736    Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00000640226  n/a   
 
 
-
 
NC_011830  Dhaf_3488  deoxyxylulose-5-phosphate synthase  53.87 
 
 
631 aa  686    Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.0451312  n/a   
 
 
-
 
NC_007516  Syncc9605_1430  1-deoxy-D-xylulose-5-phosphate synthase  52.7 
 
 
643 aa  637    Synechococcus sp. CC9605  Bacteria  normal  normal  0.0817623 
 
 
-
 
NC_007517  Gmet_1934  1-deoxy-D-xylulose-5-phosphate synthase  60 
 
 
625 aa  763    Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_2822  1-deoxy-D-xylulose-5-phosphate synthase  61.72 
 
 
635 aa  794    Geobacter metallireducens GS-15  Bacteria  normal  0.553695  normal  0.10664 
 
 
-
 
NC_007519  Dde_2200  1-deoxy-D-xylulose-5-phosphate synthase  55.75 
 
 
661 aa  721    Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_0126  1-deoxy-D-xylulose-5-phosphate synthase  56.67 
 
 
646 aa  714    Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.410155 
 
 
-
 
NC_007577  PMT9312_0893  1-deoxy-D-xylulose-5-phosphate synthase  51.22 
 
 
629 aa  639    Prochlorococcus marinus str. MIT 9312  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_0430  1-deoxy-D-xylulose-5-phosphate synthase  52.07 
 
 
636 aa  657    Synechococcus elongatus PCC 7942  Bacteria  normal  0.620387  normal  0.394102 
 
 
-
 
NC_009943  Dole_1662  deoxyxylulose-5-phosphate synthase  58.75 
 
 
626 aa  758    Desulfococcus oleovorans Hxd3  Bacteria  normal  0.184143  n/a   
 
 
-
 
NC_009976  P9211_08521  1-deoxy-D-xylulose-5-phosphate synthase  52.22 
 
 
643 aa  637    Prochlorococcus marinus str. MIT 9211  Bacteria  normal  0.68369  hitchhiker  0.000952628 
 
 
-
 
NC_007644  Moth_1511  1-deoxy-D-xylulose-5-phosphate synthase  56.27 
 
 
640 aa  692    Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_007760  Adeh_1097  1-deoxy-D-xylulose-5-phosphate synthase  51.97 
 
 
636 aa  648    Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.124796  n/a   
 
 
-
 
NC_014248  Aazo_4395  deoxyxylulose-5-phosphate synthase  53.24 
 
 
635 aa  653    'Nostoc azollae' 0708  Bacteria  normal  0.326234  n/a   
 
 
-
 
NC_008819  NATL1_09721  1-deoxy-D-xylulose-5-phosphate synthase  51.31 
 
 
628 aa  635    Prochlorococcus marinus str. NATL1A  Bacteria  normal  normal  0.274515 
 
 
-
 
NC_009483  Gura_2175  1-deoxy-D-xylulose-5-phosphate synthase  61.11 
 
 
620 aa  770    Geobacter uraniireducens Rf4  Bacteria  normal  0.0116264  n/a   
 
 
-
 
NC_007947  Mfla_2133  1-deoxy-D-xylulose-5-phosphate synthase  53.18 
 
 
614 aa  656    Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.000520629  normal 
 
 
-
 
NC_012793  GWCH70_2319  1-deoxy-D-xylulose-5-phosphate synthase  51.89 
 
 
630 aa  655    Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_0943  deoxyxylulose-5-phosphate synthase  59 
 
 
635 aa  742    Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_2235  1-deoxy-D-xylulose-5-phosphate synthase  62.92 
 
 
622 aa  806    Geobacter lovleyi SZ  Bacteria  normal  0.77755  n/a   
 
 
-
 
NC_009253  Dred_1078  deoxyxylulose-5-phosphate synthase  59.42 
 
 
635 aa  783    Desulfotomaculum reducens MI-1  Bacteria  normal  0.0303047  n/a   
 
 
-
 
NC_013385  Adeg_1398  deoxyxylulose-5-phosphate synthase  58.32 
 
 
629 aa  704    Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0883  1-deoxy-D-xylulose-5-phosphate synthase  58.95 
 
 
635 aa  769    Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000000207097 
 
 
-
 
NC_011658  BCAH187_A4307  1-deoxy-D-xylulose-5-phosphate synthase  50.16 
 
 
630 aa  636    Bacillus cereus AH187  Bacteria  unclonable  0.0000000950231  n/a   
 
 
-
 
NC_009091  P9301_09521  1-deoxy-D-xylulose-5-phosphate synthase  51.54 
 
 
629 aa  642    Prochlorococcus marinus str. MIT 9301  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_3025  1-deoxy-D-xylulose-5-phosphate synthase  60.42 
 
 
646 aa  753    Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_013216  Dtox_2584  deoxyxylulose-5-phosphate synthase  55.45 
 
 
633 aa  711    Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.931562  normal  0.224926 
 
 
-
 
NC_008312  Tery_3042  1-deoxy-D-xylulose-5-phosphate synthase  52.08 
 
 
635 aa  639    Trichodesmium erythraeum IMS101  Bacteria  normal  hitchhiker  0.00899541 
 
 
-
 
NC_011883  Ddes_0956  1-deoxy-D-xylulose-5-phosphate synthase  53.65 
 
 
644 aa  662    Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.246357  n/a   
 
 
-
 
NC_011884  Cyan7425_4130  1-deoxy-D-xylulose-5-phosphate synthase  52.98 
 
 
632 aa  650    Cyanothece sp. PCC 7425  Bacteria  hitchhiker  0.000139923  normal 
 
 
-
 
NC_008346  Swol_0582  deoxyxylulose-5-phosphate synthase  54.16 
 
 
638 aa  666    Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_2448  deoxyxylulose-5-phosphate synthase  50.78 
 
 
631 aa  652    Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_1758  deoxyxylulose-5-phosphate synthase  57.44 
 
 
633 aa  726    Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal  0.805776 
 
 
-
 
NC_008554  Sfum_1418  deoxyxylulose-5-phosphate synthase  100 
 
 
646 aa  1327    Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.793105  normal  0.333041 
 
 
-
 
NC_008576  Mmc1_1048  1-deoxy-D-xylulose-5-phosphate synthase  53.58 
 
 
622 aa  650    Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_2182  1-deoxy-D-xylulose-5-phosphate synthase  57.35 
 
 
625 aa  743    Geobacter lovleyi SZ  Bacteria  normal  0.0455646  n/a   
 
 
-
 
NC_008609  Ppro_1191  1-deoxy-D-xylulose-5-phosphate synthase  61.27 
 
 
624 aa  758    Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_2403  1-deoxy-D-xylulose-5-phosphate synthase  58.51 
 
 
626 aa  736    Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_1018  1-deoxy-D-xylulose-5-phosphate synthase  60.7 
 
 
637 aa  775    Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_0828  1-deoxy-D-xylulose-5-phosphate synthase  50.63 
 
 
627 aa  640    Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_1718  1-deoxy-D-xylulose-5-phosphate synthase  54.59 
 
 
641 aa  694    Desulfovibrio vulgaris DP4  Bacteria  normal  0.0789997  normal  0.8348 
 
 
-
 
NC_011891  A2cp1_1225  deoxyxylulose-5-phosphate synthase  52.68 
 
 
636 aa  643    Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_2870  1-deoxy-D-xylulose-5-phosphate synthase  50 
 
 
630 aa  634  1e-180  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.016121  n/a   
 
 
-
 
NC_005945  BAS4081  1-deoxy-D-xylulose-5-phosphate synthase  50 
 
 
630 aa  634  1e-180  Bacillus anthracis str. Sterne  Bacteria  normal  0.491332  n/a   
 
 
-
 
NC_005957  BT9727_3919  1-deoxy-D-xylulose-5-phosphate synthase  50 
 
 
630 aa  634  1e-180  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.000000000317792  n/a   
 
 
-
 
NC_006274  BCZK3930  1-deoxy-D-xylulose-5-phosphate synthase  50 
 
 
630 aa  634  1e-180  Bacillus cereus E33L  Bacteria  normal  0.0146607  n/a   
 
 
-
 
NC_011772  BCG9842_B0947  1-deoxy-D-xylulose-5-phosphate synthase  50 
 
 
630 aa  633  1e-180  Bacillus cereus G9842  Bacteria  decreased coverage  0.0000059556  decreased coverage  0.0000085811 
 
 
-
 
NC_007530  GBAA_4400  1-deoxy-D-xylulose-5-phosphate synthase  50 
 
 
630 aa  634  1e-180  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.0000595966  n/a   
 
 
-
 
NC_007614  Nmul_A0236  1-deoxy-D-xylulose-5-phosphate synthase  51.79 
 
 
614 aa  632  1e-180  Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.947213  n/a   
 
 
-
 
NC_013161  Cyan8802_0484  1-deoxy-D-xylulose-5-phosphate synthase  52.56 
 
 
636 aa  632  1e-180  Cyanothece sp. PCC 8802  Bacteria  normal  0.0190528  normal 
 
 
-
 
NC_010184  BcerKBAB4_4029  1-deoxy-D-xylulose-5-phosphate synthase  49.84 
 
 
630 aa  634  1e-180  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.000105298  n/a   
 
 
-
 
NC_011773  BCAH820_4197  1-deoxy-D-xylulose-5-phosphate synthase  50 
 
 
630 aa  634  1e-180  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.9666000000000002e-33 
 
 
-
 
NC_011726  PCC8801_0471  1-deoxy-D-xylulose-5-phosphate synthase  52.56 
 
 
636 aa  633  1e-180  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_011725  BCB4264_A4287  1-deoxy-D-xylulose-5-phosphate synthase  50.16 
 
 
630 aa  634  1e-180  Bacillus cereus B4264  Bacteria  unclonable  0.000332787  n/a   
 
 
-
 
NC_008740  Maqu_2438  1-deoxy-D-xylulose-5-phosphate synthase  50.24 
 
 
643 aa  632  1e-180  Marinobacter aquaeolei VT8  Bacteria  normal  0.688474  n/a   
 
 
-
 
NC_011059  Paes_1686  1-deoxy-D-xylulose-5-phosphate synthase  50.4 
 
 
659 aa  631  1e-179  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_6781  1-deoxy-D-xylulose-5-phosphate synthase  53.38 
 
 
653 aa  629  1e-179  Burkholderia phytofirmans PsJN  Bacteria  normal  0.772471  hitchhiker  0.0000939262 
 
 
-
 
NC_011901  Tgr7_0832  1-deoxy-D-xylulose-5-phosphate synthase  51.09 
 
 
640 aa  629  1e-179  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.111285  n/a   
 
 
-
 
NC_007952  Bxe_B2827  1-deoxy-D-xylulose-5-phosphate synthase  53.05 
 
 
635 aa  629  1e-179  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_3061  1-deoxy-D-xylulose-5-phosphate synthase  52.41 
 
 
618 aa  625  1e-178  Dechloromonas aromatica RCB  Bacteria  hitchhiker  0.004887  hitchhiker  0.00000111191 
 
 
-
 
NC_007484  Noc_1743  1-deoxy-D-xylulose-5-phosphate synthase  50.32 
 
 
640 aa  627  1e-178  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_007513  Syncc9902_1069  1-deoxy-D-xylulose-5-phosphate synthase  51.72 
 
 
643 aa  627  1e-178  Synechococcus sp. CC9902  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A2631  1-deoxy-D-xylulose-5-phosphate synthase  49.92 
 
 
631 aa  627  1e-178  Methylibium petroleiphilum PM1  Bacteria  normal  0.898306  normal 
 
 
-
 
NC_011662  Tmz1t_1774  1-deoxy-D-xylulose-5-phosphate synthase  52.03 
 
 
622 aa  627  1e-178  Thauera sp. MZ1T  Bacteria  normal  0.0951101  n/a   
 
 
-
 
NC_010730  SYO3AOP1_0652  1-deoxy-D-xylulose-5-phosphate synthase  48.73 
 
 
631 aa  626  1e-178  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_0698  deoxyxylulose-5-phosphate synthase  49.92 
 
 
631 aa  622  1e-177  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008820  P9303_15371  1-deoxy-D-xylulose-5-phosphate synthase  52.29 
 
 
644 aa  624  1e-177  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal  0.326891 
 
 
-
 
NC_007005  Psyr_0604  1-deoxy-D-xylulose-5-phosphate synthase  49.6 
 
 
630 aa  621  1e-176  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.390731 
 
 
-
 
NC_011661  Dtur_1044  deoxyxylulose-5-phosphate synthase  49.36 
 
 
618 aa  619  1e-176  Dictyoglomus turgidum DSM 6724  Bacteria  normal  0.213907  n/a   
 
 
-
 
NC_011898  Ccel_1900  deoxyxylulose-5-phosphate synthase  49.44 
 
 
623 aa  619  1e-176  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00488607  n/a   
 
 
-
 
NC_011729  PCC7424_4569  1-deoxy-D-xylulose-5-phosphate synthase  51.72 
 
 
635 aa  619  1e-176  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_010501  PputW619_0579  1-deoxy-D-xylulose-5-phosphate synthase  49.52 
 
 
631 aa  619  1e-176  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_007973  Rmet_2615  1-deoxy-D-xylulose-5-phosphate synthase  51.27 
 
 
637 aa  619  1e-176  Cupriavidus metallidurans CH34  Bacteria  normal  0.0207867  normal  0.922526 
 
 
-
 
NC_010524  Lcho_3373  deoxyxylulose-5-phosphate synthase  50.63 
 
 
639 aa  620  1e-176  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_008639  Cpha266_0671  1-deoxy-D-xylulose-5-phosphate synthase  50.56 
 
 
643 aa  620  1e-176  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_2511  deoxyxylulose-5-phosphate synthase  50.24 
 
 
625 aa  616  1e-175  Clostridium phytofermentans ISDg  Bacteria  normal  0.465086  n/a   
 
 
-
 
NC_002947  PP_0527  1-deoxy-D-xylulose-5-phosphate synthase  49.68 
 
 
631 aa  616  1e-175  Pseudomonas putida KT2440  Bacteria  normal  0.384835  normal 
 
 
-
 
NC_009997  Sbal195_1382  1-deoxy-D-xylulose-5-phosphate synthase  50.49 
 
 
622 aa  615  1e-175  Shewanella baltica OS195  Bacteria  normal  0.211021  normal  0.482366 
 
 
-
 
NC_010322  PputGB1_0572  1-deoxy-D-xylulose-5-phosphate synthase  49.52 
 
 
631 aa  615  1e-175  Pseudomonas putida GB-1  Bacteria  normal  normal  0.888062 
 
 
-
 
NC_009512  Pput_0561  1-deoxy-D-xylulose-5-phosphate synthase  49.68 
 
 
631 aa  616  1e-175  Pseudomonas putida F1  Bacteria  normal  normal  0.763827 
 
 
-
 
NC_010623  Bphy_3948  1-deoxy-D-xylulose-5-phosphate synthase  50.78 
 
 
632 aa  617  1e-175  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
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