| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_4569 |
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| Symbol | |
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| ID | 7108319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011729 |
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| Strand | + |
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| Start bp | 5052121 |
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| End bp | 5054028 |
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| Gene Length | 1908 bp |
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| Protein Length | 635 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 643482786 |
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| Product | 1-deoxy-D-xylulose-5-phosphate synthase |
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| Protein accession | YP_002379799 |
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| Protein GI | 218441470 |
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| COG category | [H] Coenzyme transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1154] Deoxyxylulose-5-phosphate synthase |
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| TIGRFAM ID | [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCTAA GTGAAATTAC TCATCCAAAT CAATTACATG GTTTATCAAT TCGTCAATTA
GAAGATATTG CCCGTCAAAT TCGAGAAAAA CATTTACAAA CCGTTGCCAC CAGTGGGGGA
CATCTGGGCC CAGGTTTAGG GGTTGTGGAA CTGACGATCG CCCTGTATCA AACTCTCGAT
TTAGACCGAG ATAAGGTAAT CTGGGACGTG GGTCATCAAG CCTATCCCCA TAAGATGCTG
ACAGGACGCT ACAATAACTT CAATACTTTA CGTCAAAAAA ATGGGATAGC GGGTTATCTC
AAACGGTGTG AGAGCAAATT TGACCACTTT GGAGCAGGAC ACGCTTCTAC AAGTATTTCT
GCTGCCCTAG GAATGGCCTT AGCTAGAGAT GCTCAAGGAG AAGACTACAA AGTCGCCGCC
ATTATTGGGG ATGGTGCGTT AACGGGAGGA ATGGCCTTAG AAGCGATCAA TCATGCCGGT
CATTTACCCA ACACCAACCT AATGGTGATT TTAAATGATA ATGAAATGTC TATTTCTCCT
AATGTGGGGG CAATTTCTCG CTATTTAAAT AAAGTTCGTC TCAGTGAGCC GGTTCAATTC
CTCAGCGATA ATCTCGAAGA ACAATTTAAA CATCTGCCTT TCTTCGGCGA TGTCACCCCA
GAAATGGATC GCCTTAAAGA AGGGATGAAA CGTCTCGCTG TGCCAAAAGT TGGCGCAGTC
ATTGAAGAAC TGGGATTTAA ATATTTTGGC CCGATCGATG GTCATAATTT GCGAGAATTG
ATCAATACCT TTAAACAAGC TCATAAAGTA CATGGCCCTG TGTTTGTTCA TGTGGCCACC
GTTAAAGGAA AAGGGTATGA ATTAGCCGAA CAAGACCAAG TCGGTTATCA TGCTCAAAGC
CCCTTTAATT TAGTCACCGG TAAACCCATT CCCTCCAGTA AACCCAAACC TCCCGGTTAT
TCAAAAGTTT TTGCCCATAC TTTAACGAAA CTGGCCGAAA ATAATCCCAA AATTATTGGC
ATCACCGCCG CGATGGCCAC CGGAACCGGC TTGGATAAAC TTCAGCAAAA ACTTCCTAAA
CAATACATTG ATGTGGGAAT TGCCGAACAA CACGCGGTTA CTCTGGCGGC AGGGTTAGCT
TGTGAGGGAA TGCGTCCCGT TGTAGCCATT TATTCTACCT TCTTACAACG GGCCTATGAC
CAAGTGATTC ATGATGTCTG TATCCAAAAT TTACCCGTTT TCTTCTGTAT GGATCGGGCT
GGGATTGTTG GGGCAGATGG GCCGACTCAC CAAGGAATGT ATGATATTGC TTATCTGCGG
TGTATTCCCA ATCTTGTGAT TATGGCCCCC AAAGATGAAG CAGAATTACA ACGGATGATC
GTCACCGGGG TTAATTATAC CGATGGGCCG ATCGCTATGC GTTATCCTCG TGGGAACGGG
TTAGGTGTTC CCTTAATGGA AGAAGGATGG GAAGCTTTAC CCATCGGAAA AGGGGAAATT
CTCCGCAATG GGGATGATCT GTTATTGCTC GGATATGGCA CGATGGTTAA TACCGCGATG
CAAGTTGCTG AAATTTTAGG GGAACATGGA ATAGAGGCAA CTGTGGTTAA TGCCCGTTTT
GTCAAGCCTT TAGATACAGA TTTAATCGTA CCTTTAGCCA AACAAACCGG TAAAGTTGTG
ACCTTAGAAG AAGGTTGTCT GATGGGAGGT TTTGGATCTG CTGTCGCTGA AGCCTTATTA
GATCACAATG TTTTAGTACC AGTTAAACGC TTTGGTGTTC CGGATCAGTT AGTGGATCAT
GCTAAACCGG ATGAATCTTT TGCTGATTTG GGATTAACCA GTTCTCAAAT TGCCGATGAG
GTGCTTAAAA GTTTCTTTAA AACTCAAGAA CCTTCTGTAA TTAGTTAA
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| Protein sequence | MHLSEITHPN QLHGLSIRQL EDIARQIREK HLQTVATSGG HLGPGLGVVE LTIALYQTLD
LDRDKVIWDV GHQAYPHKML TGRYNNFNTL RQKNGIAGYL KRCESKFDHF GAGHASTSIS
AALGMALARD AQGEDYKVAA IIGDGALTGG MALEAINHAG HLPNTNLMVI LNDNEMSISP
NVGAISRYLN KVRLSEPVQF LSDNLEEQFK HLPFFGDVTP EMDRLKEGMK RLAVPKVGAV
IEELGFKYFG PIDGHNLREL INTFKQAHKV HGPVFVHVAT VKGKGYELAE QDQVGYHAQS
PFNLVTGKPI PSSKPKPPGY SKVFAHTLTK LAENNPKIIG ITAAMATGTG LDKLQQKLPK
QYIDVGIAEQ HAVTLAAGLA CEGMRPVVAI YSTFLQRAYD QVIHDVCIQN LPVFFCMDRA
GIVGADGPTH QGMYDIAYLR CIPNLVIMAP KDEAELQRMI VTGVNYTDGP IAMRYPRGNG
LGVPLMEEGW EALPIGKGEI LRNGDDLLLL GYGTMVNTAM QVAEILGEHG IEATVVNARF
VKPLDTDLIV PLAKQTGKVV TLEEGCLMGG FGSAVAEALL DHNVLVPVKR FGVPDQLVDH
AKPDESFADL GLTSSQIADE VLKSFFKTQE PSVIS
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