Gene Nmul_A0236 details

Gene Information

• Locus tag: Nmul_A0236
• ID: 3786318
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrosospira multiformis ATCC 25196
• Kingdom: Bacteria
• Replicon accession: NC_007614
• Strand: +
• Start bp: 250271
• End bp: 252115
• Gene Length: 1845 bp
• Protein Length: 614 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 637810308
• Product: 1-deoxy-D-xylulose-5-phosphate synthase
• Protein accession: YP_410936
• Protein GI: 82701370
• COG category: [H] Coenzyme transport and metabolism; [I] Lipid transport and metabolism
• COG ID: [COG1154] Deoxyxylulose-5-phosphate synthase
• TIGRFAM ID: [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.947213
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCACCCAT TGCTCAATAC CATTACCGAT CCTGTCAAGC TGCGGGCACT GGACCGCAAG 
TTGCTGCCAC AGCTTGCAGA CGAGTTACGC CAATTCCTGG TTGAATCGGT AGCCAAAACT 
GGCGGTCATC TATCCTCCAA TCTGGGTACG GTCGAACTGA CCATCGCGCT GCACTACGTT 
TTCAATACAC CCTATGACCG CCTGGTCTGG GATGTGGGCC ACCAGACTTA TGTCCATAAA 
ATTCTGACGG GACGGCGCGA AGGCATGAGC AAATTGCGCA TGCGCGGCGG TATCGCCGGC 
TTTCCCCGCC GGGATGAAAG TGAATATGAC GCTTTCGGCA CCGCTCACTC GAGTACCTCC 
ATCAGCGCCG CGCTCGGGAT GGCAGTAGCG TCGCAGTGGG AAGGCAAGAA GCGGTCCGTA 
GTCGCGGTGA TCGGTGATGG CGCGATGAGT GCCGGCATGG CGTTCGAGGC TTTGAATAAT 
GCCGGCGCCA TGGATACCAA CCTGCTGGTC ATTCTGAACG ACAACGATAT GTCGATTTCC 
CGGCCAGTGG GAGCGCTCAA CAATTATCTG GCGCGGCTCA TGTCCGGCCA GTTTTATGCA 
ACCGCGCGGC GCGCGGGCGA GAAAATGCTG GGGGTGGTTC CACACGTGCT GGAACTTGCC 
AAGCGTGCCG AGGAGCATGT AAAAGGCATG GTGACGCCAA GCACGCTGTT TGAAGAGTTC 
GGTTTCAATT ATATCGGGCC TATTGATGGC CATGATCTTG ACGTGCTTGT CAGCACGCTC 
AACAACATCC GGAATCTTCG CGGTCCCCAG TTTCTGCACG TGGTAACCCG TAAAGGGGCG 
GGGTACAAGG CGGCGGAAGA TGACCCGATT CTTTATCACG GCGTGACCAG GTTCAATCCC 
GACGCGGGCA TCATTCCCAA GGCTTCAGTC AAGCCGTCCT ATACCCAGGT TTTCGGGGAT 
TGGCTGTGTG ACATGGCGGC ATTGGACCAG CGTCTGGTAG GGATTACTCC GGCCATGCGA 
GAGGGATCGG GTATGGTGAG ATTTTCCCAC GAATATGCCG ATCGTTATTT TGACGTGGGT 
ATCGCCGAGC AGCATGCCGT CACCTTTGCA GCCGGGCTCG CGTGCGATGG GTTGAAGCCG 
GTGGTGGCGA TCTATTCGAC ATTTCTCCAG CGCGCATATG ACCAGCTGAT TCATGATGTC 
GCCATTCAGA ATCTTCCTGT CGTGTTTGCC ATAGACCGTG CCGGACTGGT GGGAGCAGAC 
GGACCTACCC ATGCGGGGAG TTTCGATCTG ACTTACCTGC GCTGTATTCC GAACATTACC 
GTAATGGCTC CTTCGGATGA GAACGAATGT CGCCAGATGC TGTACACCGC TTTTCAGATG 
AATACCCCCG CTGCTGTGCG CTATCCCCGA GGTTCAGGTA GCGGGGTGGC TCAGCAGAAA 
GAGATGCAGA TGCTGCCGCT CGGGCGAGGT GAAATACGGC GGGAGGGAGC GGAAATTGCA 
TTGCTCGCGT TCGGCAGCAT GCTCCAGCCT TGCCTTGAGG CAGCGGAAGA ATTGAATGCG 
ACAGTCGCCA ATATGCGTTT TGTCAAACCC CTGGACGATG ATCTCGTTGC ATCGCTGGCG 
GCCAATCACG AATTGCTCGT TACGGTGGAG GAAAACACTG TCATGGGTGG CGCAGGCAGC 
GCGGTTCTGG AATCACTATC TGCCCGAGGT CGTACAGTTC CGGTATTGCA GCTGGGTCTG 
CCGGACACTT TCCTCGACCA GGGCGACCCT TCTCAGATGT TGAGCGAGTG CGGGCTGGAT 
AGGGAAGGGA TCGTACACGC CATAAGAGCG AGATTCCCGA AGTAA 

 

Protein sequence

MHPLLNTITD PVKLRALDRK LLPQLADELR QFLVESVAKT GGHLSSNLGT VELTIALHYV 
FNTPYDRLVW DVGHQTYVHK ILTGRREGMS KLRMRGGIAG FPRRDESEYD AFGTAHSSTS 
ISAALGMAVA SQWEGKKRSV VAVIGDGAMS AGMAFEALNN AGAMDTNLLV ILNDNDMSIS 
RPVGALNNYL ARLMSGQFYA TARRAGEKML GVVPHVLELA KRAEEHVKGM VTPSTLFEEF 
GFNYIGPIDG HDLDVLVSTL NNIRNLRGPQ FLHVVTRKGA GYKAAEDDPI LYHGVTRFNP 
DAGIIPKASV KPSYTQVFGD WLCDMAALDQ RLVGITPAMR EGSGMVRFSH EYADRYFDVG 
IAEQHAVTFA AGLACDGLKP VVAIYSTFLQ RAYDQLIHDV AIQNLPVVFA IDRAGLVGAD 
GPTHAGSFDL TYLRCIPNIT VMAPSDENEC RQMLYTAFQM NTPAAVRYPR GSGSGVAQQK 
EMQMLPLGRG EIRREGAEIA LLAFGSMLQP CLEAAEELNA TVANMRFVKP LDDDLVASLA 
ANHELLVTVE ENTVMGGAGS AVLESLSARG RTVPVLQLGL PDTFLDQGDP SQMLSECGLD 
REGIVHAIRA RFPK