| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_1774 |
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| Symbol | |
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| ID | 7085744 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | - |
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| Start bp | 1995416 |
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| End bp | 1997284 |
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| Gene Length | 1869 bp |
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| Protein Length | 622 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643698796 |
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| Product | 1-deoxy-D-xylulose-5-phosphate synthase |
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| Protein accession | YP_002355422 |
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| Protein GI | 217970188 |
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| COG category | [H] Coenzyme transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1154] Deoxyxylulose-5-phosphate synthase |
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| TIGRFAM ID | [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0951101 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCCCCT ACCCGAACCT GGAACGCGTC GGCTGTCCCG CCGACGTCCG TGCACTCGAT
CGCCGCGAAC TCGGCGCCCT CGCCTCCGAA TTGCGCGCCT TCCTGATCGA GTCGGTATCG
AAGACCGGCG GCCATCTGTC CTCCAACCTC GGCACCGTCG AGCTGACGAT CGCGCTGCAC
CACGTTTTCA ACACCCCTCA CGACCGCATC GTGTGGGACG TCGGCCACCA GACCTACGGC
CACAAGGTGC TCACCGGCCG CCGCGAGGCG ATGACCGGGC TGCGCCACTT CGGCGGCATC
TCCGGCTTCC CGCGGCGCTG CGAGAGCGAG TACGACACCT TCGGCACCGC ACACTCCTCC
ACCTCGATCT CGGCTGCGCT CGGCATGGCC GTGGCGGCGC GCGCACGCGG CGAGGACCGC
CACGCGATCG CGGTGATCGG CGACGGCGCG ATGTCGGCCG GCATGGCCTT CGAGGCCCTC
AACAACGCCG GCGACATGGA GAACCTCAAC CTGCTGGTGA TCCTCAACGA CAACGAGATG
TCGATTTCGC CACCGGTGGG GGCGCTCACC AAGATCCTCG CCCGCATGAT GTCGGGCTCG
ACCTACAACA CCGCGCGCCG GGTCGGCGAG AAGGTGCTCG GCGTCGCCCC GCCGGTGGCC
GAGCTCGCGC GCAAGGTCGA GGAGTACGCC AAGGGCATGA TCGGCCCGGG CACGCTGTTC
GAGGAGTTCG GCTTCCACTA CTACGGTCCG ATCGACGGCC ACGACCTCGA CGCACTGATT
CCGACCCTGC AGAACCTGCG CAAGCTCAAG GGACCGCAGT TCCTCCACGT GATCACCCGC
AAGGGCCAGG GCTACAAGCT CGCCGAGGCC GACCCGGTGC TCTACCACGG GGTGTCGAAG
TTCGATCACA CCGCCGGCAT CCAGACCGGC AAGGGCGGTG GCAAGCTCAC CTACACCCAG
GTGTTCGGCG ACTGGCTGTG CGACATGGCC AAGGCCGATC CGCGCATCGT CGGCATCACC
CCGGCGATGC GCGAGGGCTC GGGCCTGGTG CGCTTCGCGC AGGAGTTCCC CGAGCGCTAC
TTCGACGTCG GCATCGCCGA GCAGCACGCG GTCACCTTCG CCGCCGGGCT GGCCTGCGAG
GGCTTCGTGC CGGTGGTGGC GATCTACTCG ACCTTCCTTC AGCGCGCCTA CGACCAGCTC
ATCCACGACG TCGCGCTGCA GAACCTGCCG GTCGTGTTCG CGATCGACCG CGGCGGCCTG
GTGGGCGCCG ACGGCGCGAC CCACCATGGC GCCTTCGACC TCTCCTTCCT CAGCTGCGTG
CCCAACATGG TGGTGATGGC GCCCTCAGAC GAGGACGAAT GCCGCCAGAT GCTCTACACC
GCGGTGCAGC ATGCGGGCCC GAGCGCGGTG CGCTATCCGC GTGGCGGCGG CAACGGCACC
GCGCCCCGGG CACAGATGCG CGCCCTGCCG ATCGGCAAGG GCGAGGTCGT GCGCCGTGGC
CGCGGCATCG CCCTGCTCGC CTTCGGCAGC CTGCTCGGAG TGGCGCGCGA GGTCGCCGAG
ACGCTCGACG CCACGGTGGC CAACATGCGC TTCGTCAAGC CGCTCGACGT CGAGCTGGTG
GCCGAACTCG CCACCAGCCA CGACCTCATC GTCACCCTCG AGGAGAACGC GGTGATCGGC
GGCGCCGGCG CCGAGGTCTC ACGGCTCGTC GACGGCCTCG CCACGCGCCC ACGCGTGCTG
CGCCTGGGCC TGCCCGACCA CTTCATCGAC CACGGCGACC AAGCACAACT GCTCGCCTCG
GTCGGCCTCG ATCAGGACGG CATCCTCGCC AGCATCGCAC GCGCGACCGG AGCCCCGGAG
CGCGCCTAA
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| Protein sequence | MAPYPNLERV GCPADVRALD RRELGALASE LRAFLIESVS KTGGHLSSNL GTVELTIALH
HVFNTPHDRI VWDVGHQTYG HKVLTGRREA MTGLRHFGGI SGFPRRCESE YDTFGTAHSS
TSISAALGMA VAARARGEDR HAIAVIGDGA MSAGMAFEAL NNAGDMENLN LLVILNDNEM
SISPPVGALT KILARMMSGS TYNTARRVGE KVLGVAPPVA ELARKVEEYA KGMIGPGTLF
EEFGFHYYGP IDGHDLDALI PTLQNLRKLK GPQFLHVITR KGQGYKLAEA DPVLYHGVSK
FDHTAGIQTG KGGGKLTYTQ VFGDWLCDMA KADPRIVGIT PAMREGSGLV RFAQEFPERY
FDVGIAEQHA VTFAAGLACE GFVPVVAIYS TFLQRAYDQL IHDVALQNLP VVFAIDRGGL
VGADGATHHG AFDLSFLSCV PNMVVMAPSD EDECRQMLYT AVQHAGPSAV RYPRGGGNGT
APRAQMRALP IGKGEVVRRG RGIALLAFGS LLGVAREVAE TLDATVANMR FVKPLDVELV
AELATSHDLI VTLEENAVIG GAGAEVSRLV DGLATRPRVL RLGLPDHFID HGDQAQLLAS
VGLDQDGILA SIARATGAPE RA
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