More than 300 homologs were found in PanDaTox collection
for query gene Mmc1_1048 on replicon NC_008576
Organism: Magnetococcus sp. MC-1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
CP001509  ECD_00368  1-deoxy-D-xylulose-5-phosphate synthase  53.23 
 
 		 620 aa  647    Escherichia coli BL21(DE3)  Bacteria  normal  1  n/a   
 
 
-
 
CP001637  EcDH1_3189  deoxyxylulose-5-phosphate synthase  53.06 
 
 		 620 aa  646    Escherichia coli DH1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009783  VIBHAR_01173  1-deoxy-D-xylulose-5-phosphate synthase  53.3 
 
 		 621 aa  645    Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_002939  GSU0686  1-deoxy-D-xylulose-5-phosphate synthase  55.56 
 
 		 637 aa  672    Geobacter sulfurreducens PCA  Bacteria  normal  0.351489  n/a   
 
 
-
 
NC_002939  GSU1764  1-deoxy-D-xylulose-5-phosphate synthase  54.07 
 
 		 626 aa  653    Geobacter sulfurreducens PCA  Bacteria  normal  0.0479282  n/a   
 
 
-
 
NC_002947  PP_0527  1-deoxy-D-xylulose-5-phosphate synthase  54.07 
 
 		 631 aa  655    Pseudomonas putida KT2440  Bacteria  normal  0.384835  normal  1 
 
 
-
 
NC_010159  YpAngola_A3074  1-deoxy-D-xylulose-5-phosphate synthase  52.18 
 
 		 619 aa  638    Yersinia pestis Angola  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010623  Bphy_3948  1-deoxy-D-xylulose-5-phosphate synthase  55.66 
 
 		 632 aa  678    Burkholderia phymatum STM815  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002977  MCA0817  1-deoxy-D-xylulose-5-phosphate synthase  56.2 
 
 		 639 aa  664    Methylococcus capsulatus str. Bath  Bacteria  normal  0.64849  n/a   
 
 
-
 
NC_003295  RSc2221  1-deoxy-D-xylulose-5-phosphate synthase  55.41 
 
 		 636 aa  666    Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009078  BURPS1106A_A2392  1-deoxy-D-xylulose-5-phosphate synthase  55.34 
 
 		 634 aa  668    Burkholderia pseudomallei 1106a  Bacteria  normal  1  n/a   
 
 
-
 
NC_009708  YpsIP31758_3112  1-deoxy-D-xylulose-5-phosphate synthase  52.5 
 
 		 619 aa  643    Yersinia pseudotuberculosis IP 31758  Bacteria  normal  1  n/a   
 
 
-
 
NC_004310  BR0436  1-deoxy-D-xylulose-5-phosphate synthase  53.95 
 
 		 643 aa  644    Brucella suis 1330  Bacteria  normal  1  n/a   
 
 
-
 
NC_009832  Spro_1078  1-deoxy-D-xylulose-5-phosphate synthase  52.42 
 
 		 621 aa  640    Serratia proteamaculans 568  Bacteria  normal  1  hitchhiker  0.000138004 
 
 
-
 
NC_004578  PSPTO_0698  deoxyxylulose-5-phosphate synthase  52.32 
 
 		 631 aa  636    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_009049  Rsph17029_1897  1-deoxy-D-xylulose-5-phosphate synthase  53.53 
 
 		 648 aa  647    Rhodobacter sphaeroides ATCC 17029  Bacteria  decreased coverage  0.00653181  normal  0.596808 
 
 
-
 
NC_010552  BamMC406_3776  1-deoxy-D-xylulose-5-phosphate synthase  54.86 
 
 		 634 aa  671    Burkholderia ambifaria MC40-6  Bacteria  normal  0.495759  normal  0.0534173 
 
 
-
 
NC_010002  Daci_2242  1-deoxy-D-xylulose-5-phosphate synthase  53.62 
 
 		 638 aa  645    Delftia acidovorans SPH-1  Bacteria  normal  1  normal  0.0315294 
 
 
-
 
NC_006349  BMAA0330  1-deoxy-D-xylulose-5-phosphate synthase  55.34 
 
 		 634 aa  668    Burkholderia mallei ATCC 23344  Bacteria  normal  1  n/a   
 
 
-
 
NC_007005  Psyr_0604  1-deoxy-D-xylulose-5-phosphate synthase  53.04 
 
 		 630 aa  642    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  0.390731 
 
 
-
 
NC_008825  Mpe_A2631  1-deoxy-D-xylulose-5-phosphate synthase  55.2 
 
 		 631 aa  669    Methylibium petroleiphilum PM1  Bacteria  normal  0.898306  normal  1 
 
 
-
 
NC_007298  Daro_3061  1-deoxy-D-xylulose-5-phosphate synthase  54.9 
 
 		 618 aa  655    Dechloromonas aromatica RCB  Bacteria  hitchhiker  0.004887  hitchhiker  0.00000111191 
 
 
-
 
NC_008783  BARBAKC583_0400  1-deoxy-D-xylulose-5-phosphate synthase  53.03 
 
 		 638 aa  648    Bartonella bacilliformis KC583  Bacteria  normal  1  n/a   
 
 
-
 
NC_010501  PputW619_0579  1-deoxy-D-xylulose-5-phosphate synthase  54.31 
 
 		 631 aa  657    Pseudomonas putida W619  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007347  Reut_A0882  1-deoxy-D-xylulose-5-phosphate synthase  56.08 
 
 		 638 aa  670    Ralstonia eutropha JMP134  Bacteria  normal  1  n/a   
 
 
-
 
NC_007404  Tbd_0879  1-deoxy-D-xylulose-5-phosphate synthase  56.84 
 
 		 618 aa  663    Thiobacillus denitrificans ATCC 25259  Bacteria  normal  1  normal  0.623076 
 
 
-
 
NC_007406  Nwi_0633  1-deoxy-D-xylulose-5-phosphate synthase  53.5 
 
 		 666 aa  639    Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.300424  normal  1 
 
 
-
 
NC_009253  Dred_1078  deoxyxylulose-5-phosphate synthase  52.5 
 
 		 635 aa  650    Desulfotomaculum reducens MI-1  Bacteria  normal  0.0303047  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0842  1-deoxy-D-xylulose-5-phosphate synthase  55.34 
 
 		 634 aa  668    Burkholderia pseudomallei 1710b  Bacteria  normal  1  n/a   
 
 
-
 
NC_007484  Noc_1743  1-deoxy-D-xylulose-5-phosphate synthase  57.26 
 
 		 640 aa  700    Nitrosococcus oceani ATCC 19707  Bacteria  normal  1  n/a   
 
 
-
 
NC_007492  Pfl01_5007  1-deoxy-D-xylulose-5-phosphate synthase  52.8 
 
 		 632 aa  640    Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007493  RSP_0254  1-deoxy-D-xylulose-5-phosphate synthase  53.37 
 
 		 648 aa  646    Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009720  Xaut_4733  1-deoxy-D-xylulose-5-phosphate synthase  55.01 
 
 		 643 aa  640    Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007498  Pcar_1667  1-deoxy-D-xylulose-5-phosphate synthase  55.2 
 
 		 634 aa  669    Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00000640226  n/a   
 
 
-
 
NC_007511  Bcep18194_B2211  1-deoxy-D-xylulose-5-phosphate synthase  55.02 
 
 		 634 aa  675    Burkholderia sp. 383  Bacteria  normal  0.41875  normal  1 
 
 
-
 
NC_009379  Pnuc_1704  deoxyxylulose-5-phosphate synthase  55.27 
 
 		 633 aa  668    Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009800  EcHS_A0491  1-deoxy-D-xylulose-5-phosphate synthase  52.74 
 
 		 620 aa  647    Escherichia coli HS  Bacteria  normal  1  n/a   
 
 
-
 
NC_009428  Rsph17025_2027  1-deoxy-D-xylulose-5-phosphate synthase  53.21 
 
 		 648 aa  644    Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.0722813  normal  0.799434 
 
 
-
 
NC_007517  Gmet_1934  1-deoxy-D-xylulose-5-phosphate synthase  52.47 
 
 		 625 aa  639    Geobacter metallireducens GS-15  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007517  Gmet_2822  1-deoxy-D-xylulose-5-phosphate synthase  55.66 
 
 		 635 aa  684    Geobacter metallireducens GS-15  Bacteria  normal  0.553695  normal  0.10664 
 
 
-
 
NC_010658  SbBS512_E0341  1-deoxy-D-xylulose-5-phosphate synthase  53.23 
 
 		 620 aa  647    Shigella boydii CDC 3083-94  Bacteria  normal  1  n/a   
 
 
-
 
NC_009075  BURPS668_A2534  1-deoxy-D-xylulose-5-phosphate synthase  55.18 
 
 		 634 aa  666    Burkholderia pseudomallei 668  Bacteria  normal  1  n/a   
 
 
-
 
NC_008835  BMA10229_1706  1-deoxy-D-xylulose-5-phosphate synthase  55.34 
 
 		 651 aa  668    Burkholderia mallei NCTC 10229  Bacteria  normal  1  n/a   
 
 
-
 
NC_009079  BMA10247_A0364  1-deoxy-D-xylulose-5-phosphate synthase  55.34 
 
 		 651 aa  668    Burkholderia mallei NCTC 10247  Bacteria  normal  1  n/a   
 
 
-
 
NC_007614  Nmul_A0236  1-deoxy-D-xylulose-5-phosphate synthase  54.68 
 
 		 614 aa  669    Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.947213  n/a   
 
 
-
 
NC_007643  Rru_A0054  1-deoxy-D-xylulose-5-phosphate synthase  52.23 
 
 		 645 aa  636    Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
-
 
NC_007643  Rru_A2619  1-deoxy-D-xylulose-5-phosphate synthase  52.23 
 
 		 645 aa  635    Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.0887721  n/a   
 
 
-
 
NC_009512  Pput_0561  1-deoxy-D-xylulose-5-phosphate synthase  54.07 
 
 		 631 aa  655    Pseudomonas putida F1  Bacteria  normal  1  normal  0.763827 
 
 
-
 
NC_007650  BTH_II0614  1-deoxy-D-xylulose-5-phosphate synthase  55.34 
 
 		 634 aa  669    Burkholderia thailandensis E264  Bacteria  normal  1  n/a   
 
 
-
 
NC_010531  Pnec_1422  deoxyxylulose-5-phosphate synthase  54.47 
 
 		 633 aa  664    Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  0.205576  normal  1 
 
 
-
 
NC_008781  Pnap_1501  1-deoxy-D-xylulose-5-phosphate synthase  54.69 
 
 		 636 aa  659    Polaromonas naphthalenivorans CJ2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007794  Saro_0161  1-deoxy-D-xylulose-5-phosphate synthase  53.76 
 
 		 640 aa  652    Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  1  n/a   
 
 
-
 
NC_010465  YPK_3253  1-deoxy-D-xylulose-5-phosphate synthase  52.5 
 
 		 619 aa  643    Yersinia pseudotuberculosis YPIII  Bacteria  normal  1  n/a   
 
 
-
 
NC_009636  Smed_0492  1-deoxy-D-xylulose-5-phosphate synthase  52.32 
 
 		 637 aa  635    Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007908  Rfer_2875  1-deoxy-D-xylulose-5-phosphate synthase  54.93 
 
 		 632 aa  654    Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_009801  EcE24377A_0451  1-deoxy-D-xylulose-5-phosphate synthase  52.74 
 
 		 620 aa  647    Escherichia coli E24377A  Bacteria  normal  1  n/a   
 
 
-
 
NC_010581  Bind_1811  1-deoxy-D-xylulose-5-phosphate synthase  54.78 
 
 		 642 aa  643    Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  1  normal  0.776218 
 
 
-
 
NC_007947  Mfla_2133  1-deoxy-D-xylulose-5-phosphate synthase  54.41 
 
 		 614 aa  673    Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.000520629  normal  1 
 
 
-
 
NC_007948  Bpro_1747  1-deoxy-D-xylulose-5-phosphate synthase  55.75 
 
 		 635 aa  671    Polaromonas sp. JS666  Bacteria  normal  1  normal  0.123274 
 
 
-
 
NC_007952  Bxe_B2827  1-deoxy-D-xylulose-5-phosphate synthase  55.66 
 
 		 635 aa  675    Burkholderia xenovorans LB400  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007954  Sden_2571  1-deoxy-D-xylulose-5-phosphate synthase  52.73 
 
 		 622 aa  635    Shewanella denitrificans OS217  Bacteria  decreased coverage  0.000000155122  n/a   
 
 
-
 
NC_007958  RPD_4305  1-deoxy-D-xylulose-5-phosphate synthase  53.42 
 
 		 638 aa  635    Rhodopseudomonas palustris BisB5  Bacteria  normal  0.302176  normal  0.192366 
 
 
-
 
NC_009439  Pmen_3844  1-deoxy-D-xylulose-5-phosphate synthase  53.53 
 
 		 631 aa  658    Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007964  Nham_0778  1-deoxy-D-xylulose-5-phosphate synthase  53.34 
 
 		 668 aa  642    Nitrobacter hamburgensis X14  Bacteria  normal  0.324929  n/a   
 
 
-
 
NC_009436  Ent638_0887  1-deoxy-D-xylulose-5-phosphate synthase  52.74 
 
 		 620 aa  642    Enterobacter sp. 638  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007973  Rmet_2615  1-deoxy-D-xylulose-5-phosphate synthase  54.21 
 
 		 637 aa  660    Cupriavidus metallidurans CH34  Bacteria  normal  0.0207867  normal  0.922526 
 
 
-
 
NC_009505  BOV_0443  1-deoxy-D-xylulose-5-phosphate synthase  53.95 
 
 		 643 aa  647    Brucella ovis ATCC 25840  Bacteria  normal  0.580074  n/a   
 
 
-
 
NC_008784  BMASAVP1_1512  1-deoxy-D-xylulose-5-phosphate synthase  55.34 
 
 		 651 aa  668    Burkholderia mallei SAVP1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010498  EcSMS35_0456  1-deoxy-D-xylulose-5-phosphate synthase  53.23 
 
 		 620 aa  647    Escherichia coli SMS-3-5  Bacteria  normal  1  normal  0.927308 
 
 
-
 
NC_010515  Bcenmc03_3648  1-deoxy-D-xylulose-5-phosphate synthase  55.02 
 
 		 634 aa  674    Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008061  Bcen_4486  1-deoxy-D-xylulose-5-phosphate synthase  55.02 
 
 		 646 aa  674    Burkholderia cenocepacia AU 1054  Bacteria  normal  1  n/a   
 
 
-
 
NC_008228  Patl_1319  deoxyxylulose-5-phosphate synthase  54.16 
 
 		 621 aa  647    Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_008254  Meso_0735  1-deoxy-D-xylulose-5-phosphate synthase  55.91 
 
 		 650 aa  684    Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010468  EcolC_3213  1-deoxy-D-xylulose-5-phosphate synthase  52.74 
 
 		 620 aa  647    Escherichia coli ATCC 8739  Bacteria  normal  1  hitchhiker  0.00000252771 
 
 
-
 
NC_010338  Caul_3314  1-deoxy-D-xylulose-5-phosphate synthase  54.53 
 
 		 638 aa  639    Caulobacter sp. K31  Bacteria  normal  1  normal  0.855639 
 
 
-
 
NC_009484  Acry_1833  1-deoxy-D-xylulose-5-phosphate synthase  55.41 
 
 		 647 aa  657    Acidiphilium cryptum JF-5  Bacteria  normal  1  n/a   
 
 
-
 
NC_008309  HS_0905  1-deoxy-D-xylulose-5-phosphate synthase  53.23 
 
 		 617 aa  666    Haemophilus somnus 129PT  Bacteria  normal  1  n/a   
 
 
-
 
NC_009483  Gura_1018  1-deoxy-D-xylulose-5-phosphate synthase  54.62 
 
 		 637 aa  672    Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_010524  Lcho_3373  deoxyxylulose-5-phosphate synthase  54.7 
 
 		 639 aa  662    Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_009667  Oant_0547  1-deoxy-D-xylulose-5-phosphate synthase  53.83 
 
 		 638 aa  655    Ochrobactrum anthropi ATCC 49188  Bacteria  normal  1  n/a   
 
 
-
 
NC_008340  Mlg_1381  1-deoxy-D-xylulose-5-phosphate synthase  57 
 
 		 628 aa  692    Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.604583  normal  0.510709 
 
 
-
 
NC_009943  Dole_1662  deoxyxylulose-5-phosphate synthase  52.32 
 
 		 626 aa  648    Desulfococcus oleovorans Hxd3  Bacteria  normal  0.184143  n/a   
 
 
-
 
NC_010086  Bmul_4820  1-deoxy-D-xylulose-5-phosphate synthase  55.34 
 
 		 646 aa  672    Burkholderia multivorans ATCC 17616  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008347  Mmar10_0849  1-deoxy-D-xylulose-5-phosphate synthase  53.66 
 
 		 643 aa  639    Maricaulis maris MCS10  Bacteria  normal  1  normal  0.313067 
 
 
-
 
NC_008391  Bamb_3250  1-deoxy-D-xylulose-5-phosphate synthase  54.86 
 
 		 646 aa  671    Burkholderia ambifaria AMMD  Bacteria  normal  1  normal  0.0235548 
 
 
-
 
NC_008463  PA14_11550  1-deoxy-D-xylulose-5-phosphate synthase  53.22 
 
 		 627 aa  647    Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008543  Bcen2424_3879  1-deoxy-D-xylulose-5-phosphate synthase  55.02 
 
 		 646 aa  674    Burkholderia cenocepacia HI2424  Bacteria  normal  1  normal  0.155835 
 
 
-
 
NC_008554  Sfum_1418  deoxyxylulose-5-phosphate synthase  53.58 
 
 		 646 aa  650    Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.793105  normal  0.333041 
 
 
-
 
NC_008576  Mmc1_1048  1-deoxy-D-xylulose-5-phosphate synthase  100 
 
 		 622 aa  1271    Magnetococcus sp. MC-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009656  PSPA7_1057  1-deoxy-D-xylulose-5-phosphate synthase  53.38 
 
 		 627 aa  655    Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_008752  Aave_2015  1-deoxy-D-xylulose-5-phosphate synthase  54.18 
 
 		 622 aa  654    Acidovorax citrulli AAC00-1  Bacteria  normal  0.0928222  hitchhiker  0.00382162 
 
 
-
 
NC_008782  Ajs_1038  1-deoxy-D-xylulose-5-phosphate synthase  54.34 
 
 		 629 aa  635    Acidovorax sp. JS42  Bacteria  normal  1  normal  0.151705 
 
 
-
 
NC_008609  Ppro_1191  1-deoxy-D-xylulose-5-phosphate synthase  53.35 
 
 		 624 aa  648    Pelobacter propionicus DSM 2379  Bacteria  normal  1  n/a   
 
 
-
 
NC_008609  Ppro_2403  1-deoxy-D-xylulose-5-phosphate synthase  54.72 
 
 		 626 aa  666    Pelobacter propionicus DSM 2379  Bacteria  normal  1  n/a   
 
 
-
 
NC_009485  BBta_2479  1-deoxy-D-xylulose-5-phosphate synthase  52.95 
 
 		 641 aa  644    Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010322  PputGB1_0572  1-deoxy-D-xylulose-5-phosphate synthase  53.91 
 
 		 631 aa  653    Pseudomonas putida GB-1  Bacteria  normal  1  normal  0.888062 
 
 
-
 
NC_009719  Plav_0781  1-deoxy-D-xylulose-5-phosphate synthase  55.89 
 
 		 650 aa  679    Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.128474  normal  0.356919 
 
 
-
 
NC_009654  Mmwyl1_1145  deoxyxylulose-5-phosphate synthase  52.99 
 
 		 625 aa  635    Marinomonas sp. MWYL1  Bacteria  normal  0.820706  normal  1 
 
 
-
 
NC_008740  Maqu_2438  1-deoxy-D-xylulose-5-phosphate synthase  54.55 
 
 		 643 aa  651    Marinobacter aquaeolei VT8  Bacteria  normal  0.688474  n/a   
 
 
-
 
NC_009511  Swit_1461  1-deoxy-D-xylulose-5-phosphate synthase  54.27 
 
 		 639 aa  642    Sphingomonas wittichii RW1  Bacteria  normal  0.289953  normal  1 
 
 
-
 
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