More than 300 homologs were found in PanDaTox collection
for query gene Bcep18194_B2211 on replicon NC_007511
Organism: Burkholderia sp. 383



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
CP001509  ECD_00368  1-deoxy-D-xylulose-5-phosphate synthase  56.89 
 
 
620 aa  741    Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_3189  deoxyxylulose-5-phosphate synthase  57.05 
 
 
620 aa  742    Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_2771  1-deoxy-D-xylulose-5-phosphate synthase  60.23 
 
 
622 aa  754    Shewanella loihica PV-4  Bacteria  hitchhiker  0.00248212  normal  0.949391 
 
 
-
 
NC_010513  Xfasm12_1447  1-deoxy-D-xylulose-5-phosphate synthase  53.95 
 
 
635 aa  686    Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_1461  1-deoxy-D-xylulose-5-phosphate synthase  52.65 
 
 
639 aa  638    Sphingomonas wittichii RW1  Bacteria  normal  0.289953  normal 
 
 
-
 
NC_002947  PP_0527  1-deoxy-D-xylulose-5-phosphate synthase  60.88 
 
 
631 aa  772    Pseudomonas putida KT2440  Bacteria  normal  0.384835  normal 
 
 
-
 
NC_008786  Veis_3283  1-deoxy-D-xylulose-5-phosphate synthase  71.02 
 
 
631 aa  895    Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_008784  BMASAVP1_1512  1-deoxy-D-xylulose-5-phosphate synthase  93.85 
 
 
651 aa  1212    Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_002977  MCA0817  1-deoxy-D-xylulose-5-phosphate synthase  63.25 
 
 
639 aa  767    Methylococcus capsulatus str. Bath  Bacteria  normal  0.64849  n/a   
 
 
-
 
NC_003295  RSc2221  1-deoxy-D-xylulose-5-phosphate synthase  78.78 
 
 
636 aa  1013    Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_1357  1-deoxy-D-xylulose-5-phosphate synthase  60.98 
 
 
622 aa  763    Shewanella baltica OS155  Bacteria  hitchhiker  0.0000384826  n/a   
 
 
-
 
NC_003910  CPS_1088  1-deoxy-D-xylulose-5-phosphate synthase  56.96 
 
 
630 aa  745    Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_010515  Bcenmc03_3648  1-deoxy-D-xylulose-5-phosphate synthase  98.26 
 
 
634 aa  1281    Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_1525  1-deoxy-D-xylulose-5-phosphate synthase  60.39 
 
 
622 aa  753    Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_004578  PSPTO_0698  deoxyxylulose-5-phosphate synthase  60.45 
 
 
631 aa  764    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_01173  1-deoxy-D-xylulose-5-phosphate synthase  60.29 
 
 
621 aa  763    Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009719  Plav_0781  1-deoxy-D-xylulose-5-phosphate synthase  52.49 
 
 
650 aa  643    Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.128474  normal  0.356919 
 
 
-
 
NC_008835  BMA10229_1706  1-deoxy-D-xylulose-5-phosphate synthase  93.85 
 
 
651 aa  1212    Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_006349  BMAA0330  1-deoxy-D-xylulose-5-phosphate synthase  93.85 
 
 
634 aa  1212    Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0604  1-deoxy-D-xylulose-5-phosphate synthase  60.55 
 
 
630 aa  761    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.390731 
 
 
-
 
NC_009708  YpsIP31758_3112  1-deoxy-D-xylulose-5-phosphate synthase  58.14 
 
 
619 aa  752    Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_3061  1-deoxy-D-xylulose-5-phosphate synthase  67.21 
 
 
618 aa  858    Dechloromonas aromatica RCB  Bacteria  hitchhiker  0.004887  hitchhiker  0.00000111191 
 
 
-
 
NC_009800  EcHS_A0491  1-deoxy-D-xylulose-5-phosphate synthase  56.89 
 
 
620 aa  741    Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A0882  1-deoxy-D-xylulose-5-phosphate synthase  76.92 
 
 
638 aa  1014    Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_0879  1-deoxy-D-xylulose-5-phosphate synthase  66.56 
 
 
618 aa  823    Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal  0.623076 
 
 
-
 
NC_007406  Nwi_0633  1-deoxy-D-xylulose-5-phosphate synthase  52.63 
 
 
666 aa  644    Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.300424  normal 
 
 
-
 
NC_009438  Sputcn32_1275  1-deoxy-D-xylulose-5-phosphate synthase  61.3 
 
 
622 aa  768    Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.000628386  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0842  1-deoxy-D-xylulose-5-phosphate synthase  93.85 
 
 
634 aa  1212    Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007484  Noc_1743  1-deoxy-D-xylulose-5-phosphate synthase  60 
 
 
640 aa  773    Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_5007  1-deoxy-D-xylulose-5-phosphate synthase  61.26 
 
 
632 aa  767    Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009801  EcE24377A_0451  1-deoxy-D-xylulose-5-phosphate synthase  56.89 
 
 
620 aa  741    Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_3478  1-deoxy-D-xylulose-5-phosphate synthase  61.29 
 
 
621 aa  777    Shewanella woodyi ATCC 51908  Bacteria  normal  0.0957746  normal  0.0274929 
 
 
-
 
NC_009901  Spea_2991  1-deoxy-D-xylulose-5-phosphate synthase  61.1 
 
 
621 aa  771    Shewanella pealeana ATCC 700345  Bacteria  hitchhiker  0.00146592  n/a   
 
 
-
 
NC_007511  Bcep18194_B2211  1-deoxy-D-xylulose-5-phosphate synthase  100 
 
 
634 aa  1303    Burkholderia sp. 383  Bacteria  normal  0.41875  normal 
 
 
-
 
NC_009436  Ent638_0887  1-deoxy-D-xylulose-5-phosphate synthase  56.47 
 
 
620 aa  736    Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_2479  1-deoxy-D-xylulose-5-phosphate synthase  53.35 
 
 
641 aa  643    Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009457  VC0395_A0412  1-deoxy-D-xylulose-5-phosphate synthase  60.78 
 
 
626 aa  773    Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_010086  Bmul_4820  1-deoxy-D-xylulose-5-phosphate synthase  96.53 
 
 
646 aa  1262    Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_010465  YPK_3253  1-deoxy-D-xylulose-5-phosphate synthase  58.14 
 
 
619 aa  752    Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_1145  deoxyxylulose-5-phosphate synthase  56.77 
 
 
625 aa  707    Marinomonas sp. MWYL1  Bacteria  normal  0.820706  normal 
 
 
-
 
NC_009075  BURPS668_A2534  1-deoxy-D-xylulose-5-phosphate synthase  94.01 
 
 
634 aa  1213    Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_3329  1-deoxy-D-xylulose-5-phosphate synthase  61.43 
 
 
621 aa  774    Shewanella sediminis HAW-EB3  Bacteria  normal  0.0891002  normal 
 
 
-
 
NC_009078  BURPS1106A_A2392  1-deoxy-D-xylulose-5-phosphate synthase  93.85 
 
 
634 aa  1212    Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_007614  Nmul_A0236  1-deoxy-D-xylulose-5-phosphate synthase  70.92 
 
 
614 aa  901    Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.947213  n/a   
 
 
-
 
NC_010498  EcSMS35_0456  1-deoxy-D-xylulose-5-phosphate synthase  56.89 
 
 
620 aa  741    Escherichia coli SMS-3-5  Bacteria  normal  normal  0.927308 
 
 
-
 
NC_010577  XfasM23_1378  1-deoxy-D-xylulose-5-phosphate synthase  53.95 
 
 
635 aa  686    Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_1057  1-deoxy-D-xylulose-5-phosphate synthase  60.39 
 
 
627 aa  763    Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II0614  1-deoxy-D-xylulose-5-phosphate synthase  93.85 
 
 
634 aa  1214    Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_010658  SbBS512_E0341  1-deoxy-D-xylulose-5-phosphate synthase  56.89 
 
 
620 aa  741    Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_1038  1-deoxy-D-xylulose-5-phosphate synthase  74.11 
 
 
629 aa  925    Acidovorax sp. JS42  Bacteria  normal  normal  0.151705 
 
 
-
 
NC_007794  Saro_0161  1-deoxy-D-xylulose-5-phosphate synthase  53.39 
 
 
640 aa  642    Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_1343  1-deoxy-D-xylulose-5-phosphate synthase  60.98 
 
 
622 aa  762    Shewanella baltica OS185  Bacteria  hitchhiker  0.0000676774  n/a   
 
 
-
 
NC_009484  Acry_1833  1-deoxy-D-xylulose-5-phosphate synthase  55.63 
 
 
647 aa  642    Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2875  1-deoxy-D-xylulose-5-phosphate synthase  72.17 
 
 
632 aa  929    Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_3381  1-deoxy-D-xylulose-5-phosphate synthase  56.16 
 
 
649 aa  701    Saccharophagus degradans 2-40  Bacteria  normal  normal  0.240721 
 
 
-
 
NC_010531  Pnec_1422  deoxyxylulose-5-phosphate synthase  69.79 
 
 
633 aa  920    Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  0.205576  normal 
 
 
-
 
NC_007947  Mfla_2133  1-deoxy-D-xylulose-5-phosphate synthase  66.56 
 
 
614 aa  856    Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.000520629  normal 
 
 
-
 
NC_007948  Bpro_1747  1-deoxy-D-xylulose-5-phosphate synthase  73.67 
 
 
635 aa  952    Polaromonas sp. JS666  Bacteria  normal  normal  0.123274 
 
 
-
 
NC_007952  Bxe_B2827  1-deoxy-D-xylulose-5-phosphate synthase  88.36 
 
 
635 aa  1165    Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_2571  1-deoxy-D-xylulose-5-phosphate synthase  59.71 
 
 
622 aa  778    Shewanella denitrificans OS217  Bacteria  decreased coverage  0.000000155122  n/a   
 
 
-
 
NC_007958  RPD_4305  1-deoxy-D-xylulose-5-phosphate synthase  53.19 
 
 
638 aa  636    Rhodopseudomonas palustris BisB5  Bacteria  normal  0.302176  normal  0.192366 
 
 
-
 
NC_007963  Csal_0099  1-deoxy-D-xylulose-5-phosphate synthase  56.16 
 
 
653 aa  702    Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_007964  Nham_0778  1-deoxy-D-xylulose-5-phosphate synthase  53.11 
 
 
668 aa  643    Nitrobacter hamburgensis X14  Bacteria  normal  0.324929  n/a   
 
 
-
 
NC_010002  Daci_2242  1-deoxy-D-xylulose-5-phosphate synthase  73.82 
 
 
638 aa  926    Delftia acidovorans SPH-1  Bacteria  normal  normal  0.0315294 
 
 
-
 
NC_007973  Rmet_2615  1-deoxy-D-xylulose-5-phosphate synthase  78.3 
 
 
637 aa  1026    Cupriavidus metallidurans CH34  Bacteria  normal  0.0207867  normal  0.922526 
 
 
-
 
NC_007984  BCI_0275  1-deoxy-D-xylulose-5-phosphate synthase  54.28 
 
 
623 aa  685    Baumannia cicadellinicola str. Hc (Homalodisca coagulata)  Bacteria  normal  0.395507  n/a   
 
 
-
 
NC_008789  Hhal_0983  deoxyxylulose-5-phosphate synthase  55.46 
 
 
624 aa  686    Halorhodospira halophila SL1  Bacteria  normal  0.288267  n/a   
 
 
-
 
NC_009439  Pmen_3844  1-deoxy-D-xylulose-5-phosphate synthase  60.9 
 
 
631 aa  774    Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_0572  1-deoxy-D-xylulose-5-phosphate synthase  60.71 
 
 
631 aa  771    Pseudomonas putida GB-1  Bacteria  normal  normal  0.888062 
 
 
-
 
NC_008061  Bcen_4486  1-deoxy-D-xylulose-5-phosphate synthase  98.26 
 
 
646 aa  1281    Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_1319  deoxyxylulose-5-phosphate synthase  57.7 
 
 
621 aa  717    Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_0735  1-deoxy-D-xylulose-5-phosphate synthase  54.63 
 
 
650 aa  666    Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_1382  1-deoxy-D-xylulose-5-phosphate synthase  61.14 
 
 
622 aa  763    Shewanella baltica OS195  Bacteria  normal  0.211021  normal  0.482366 
 
 
-
 
NC_008825  Mpe_A2631  1-deoxy-D-xylulose-5-phosphate synthase  74.11 
 
 
631 aa  947    Methylibium petroleiphilum PM1  Bacteria  normal  0.898306  normal 
 
 
-
 
NC_009079  BMA10247_A0364  1-deoxy-D-xylulose-5-phosphate synthase  93.85 
 
 
651 aa  1212    Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008309  HS_0905  1-deoxy-D-xylulose-5-phosphate synthase  58.32 
 
 
617 aa  739    Haemophilus somnus 129PT  Bacteria  normal  n/a   
 
 
-
 
NC_009379  Pnuc_1704  deoxyxylulose-5-phosphate synthase  69.79 
 
 
633 aa  922    Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_2731  1-deoxy-D-xylulose-5-phosphate synthase  60.65 
 
 
622 aa  752    Shewanella sp. MR-4  Bacteria  hitchhiker  0.000470033  normal  0.733812 
 
 
-
 
NC_008322  Shewmr7_2804  1-deoxy-D-xylulose-5-phosphate synthase  60.65 
 
 
622 aa  752    Shewanella sp. MR-7  Bacteria  normal  0.0291177  normal  0.873498 
 
 
-
 
NC_008340  Mlg_1381  1-deoxy-D-xylulose-5-phosphate synthase  60.13 
 
 
628 aa  763    Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.604583  normal  0.510709 
 
 
-
 
NC_008345  Sfri_2790  1-deoxy-D-xylulose-5-phosphate synthase  60.06 
 
 
621 aa  771    Shewanella frigidimarina NCIMB 400  Bacteria  hitchhiker  0.00619282  n/a   
 
 
-
 
NC_010087  Bmul_5943  deoxyxylulose-5-phosphate synthase  65.48 
 
 
675 aa  828    Burkholderia multivorans ATCC 17616  Bacteria  normal  0.601291  normal 
 
 
-
 
NC_010623  Bphy_3948  1-deoxy-D-xylulose-5-phosphate synthase  90.54 
 
 
632 aa  1184    Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_008391  Bamb_3250  1-deoxy-D-xylulose-5-phosphate synthase  97.79 
 
 
646 aa  1277    Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.0235548 
 
 
-
 
NC_008463  PA14_11550  1-deoxy-D-xylulose-5-phosphate synthase  60.06 
 
 
627 aa  747    Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_008543  Bcen2424_3879  1-deoxy-D-xylulose-5-phosphate synthase  98.26 
 
 
646 aa  1281    Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.155835 
 
 
-
 
NC_010159  YpAngola_A3074  1-deoxy-D-xylulose-5-phosphate synthase  57.98 
 
 
619 aa  748    Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_1048  1-deoxy-D-xylulose-5-phosphate synthase  55.02 
 
 
622 aa  675    Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_2901  1-deoxy-D-xylulose-5-phosphate synthase  60.49 
 
 
622 aa  748    Shewanella sp. ANA-3  Bacteria  hitchhiker  0.00195548  hitchhiker  0.00304381 
 
 
-
 
NC_008781  Pnap_1501  1-deoxy-D-xylulose-5-phosphate synthase  72.07 
 
 
636 aa  937    Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_3373  deoxyxylulose-5-phosphate synthase  71.47 
 
 
639 aa  924    Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_009832  Spro_1078  1-deoxy-D-xylulose-5-phosphate synthase  58.54 
 
 
621 aa  752    Serratia proteamaculans 568  Bacteria  normal  hitchhiker  0.000138004 
 
 
-
 
NC_010552  BamMC406_3776  1-deoxy-D-xylulose-5-phosphate synthase  97.95 
 
 
634 aa  1276    Burkholderia ambifaria MC40-6  Bacteria  normal  0.495759  normal  0.0534173 
 
 
-
 
NC_010468  EcolC_3213  1-deoxy-D-xylulose-5-phosphate synthase  56.89 
 
 
620 aa  741    Escherichia coli ATCC 8739  Bacteria  normal  hitchhiker  0.00000252771 
 
 
-
 
NC_010501  PputW619_0579  1-deoxy-D-xylulose-5-phosphate synthase  61.04 
 
 
631 aa  770    Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_2436  1-deoxy-D-xylulose-5-phosphate synthase  61.1 
 
 
622 aa  763    Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.00469299  normal 
 
 
-
 
NC_008709  Ping_2240  deoxyxylulose-5-phosphate synthase  57.17 
 
 
622 aa  730    Psychromonas ingrahamii 37  Bacteria  normal  normal  0.381879 
 
 
-
 
NC_008740  Maqu_2438  1-deoxy-D-xylulose-5-phosphate synthase  62.36 
 
 
643 aa  774    Marinobacter aquaeolei VT8  Bacteria  normal  0.688474  n/a   
 
 
-
 
NC_009512  Pput_0561  1-deoxy-D-xylulose-5-phosphate synthase  60.68 
 
 
631 aa  772    Pseudomonas putida F1  Bacteria  normal  normal  0.763827 
 
 
-
 
NC_008752  Aave_2015  1-deoxy-D-xylulose-5-phosphate synthase  73.35 
 
 
622 aa  942    Acidovorax citrulli AAC00-1  Bacteria  normal  0.0928222  hitchhiker  0.00382162 
 
 
-
 
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