| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_1381 |
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| Symbol | |
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| ID | 4269573 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | - |
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| Start bp | 1581642 |
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| End bp | 1583528 |
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| Gene Length | 1887 bp |
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| Protein Length | 628 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638126137 |
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| Product | 1-deoxy-D-xylulose-5-phosphate synthase |
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| Protein accession | YP_742220 |
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| Protein GI | 114320537 |
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| COG category | [H] Coenzyme transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1154] Deoxyxylulose-5-phosphate synthase |
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| TIGRFAM ID | [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.604583 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.510709 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGTTT CCATAGACGA CTACCCGCTG CTGGCCCAGG TACCCGACCC TGAGGCCCTG
CGCACCCTGC CGGCCCACCG CCTGCCGGCG CTGGCCAAAG AGTTGCGCCA CTACCTGCTG
CACAGCGTGG CCCGTAGCGG CGGGCACTTG GCGGCCGGAC TCGGTGCCGT GGAGCTGACC
CTGGCCCTGC ACTACGTCTT CAATACCCCC GAGGACCGTC TGGTCTGGGA TGTGGGCCAC
CAGTGCTACC CGCACAAGAT CCTCACCGGG CGCCGCGAGC GCCTGGGCAC CATCCGCAAA
TACGGCGGCC TGGCGGGTTT CCCCAAGCGC GCCGAGAGCC CCTACGACAC CTTCGGGGTC
GGCCACTCCA GCACCTCGAT CAGCGCCGCC CTGGGCATGG CGCTGGCCGC GCGGCAGGCC
GGGGAGCAGC GCAAGGCGGT GGCCATCATC GGTGACGGCG GGATGACCGC CGGCGAGGCC
TTCGAGGCGA TGAACCACGC CGGCGATGCG GGCGCGGACC TGCTAGTGGT GCTCAACGAC
AACGAGATGT CCATTTCCGA GAACGTGGGC GCCCTCTCCC AGCACCTGAC TCGGATCCTG
TCGGGCCGCT GGTACCACCA GTTGCGCTCC GGCAGTAAGG AGGTGCTGCG CCGCCTGCCG
CCGCCGGTCC ATGAACTGGC CCGGCGCACC GAGGAGCACC TCAAAGGGAT GGTGGTCCCC
GGCACGCTGT TCGAGGAGTT AGGGTTTCAG TATTTCGGGC CGGTGGACGG CCACAACGTG
GACGCCCTGG TGGAGGTGCT CGGCAACCTG GCCCATCAAC GGGGGCCGCG CCTGTTGCAT
GTGGTCACCT GCAAGGGCAA GGGTTACCGG CCGGCGGAGC AGGACCCCAT CGCCTACCAC
GGGGTCGGGC AGTTCGATCC CGAGCAGGGG CTGCCGAAGA AATCCGGGGG CTCGCTGGCC
TACAACCAGG TCTTCGGACG TTGGCTCTGC GCCATGGCGG AACAGGACCC GCGGCTGGTG
GCCATCACCC CCGCCATGCG CGAGGGCTCC GGCATGGTCG AGTACGCCCG GCGCTTTCCC
GAGCGCTACC ACGACGTGGG CATCGCCGAG CAGCACGCGG TCACGCTGGC GGCAGGCCTG
GCCTGCGAGT CGGTGAAACC GGTGTTGGCG ATCTACTCCA CCTTCCTGCA GCGGGGTTAC
GACCAGTTGG TCCACGACGT GGCCCTGCAG AACCTGCCGG TGCTGTTCGC GGTGGACCGG
GCCGGCCTGG TGGGCGCCGA CGGCCCCACC CACCACGGCA GCTTCGACCT CTCTTACCTG
CGCTGCGTGC CCAATATGAC CATTGCCGCC CCCTCCGACG AGGCGGAGTG CTGGCGGTTG
CTGAGCACCG GCTACCACCA CGACGGTCCC TTCGCGGTGC GCTACCCCCG CGGGTCCGGC
CCCGGCGCGG CACTCCCGGA AGCGGACCTG GACCCGCTGG CCATTGGCAA GGGTGTTTGT
CGTCGCCGCG GGCGGCGGAT CGCGGTGCTG GCCTTCGGCA CCCTCGTGGT ACCGGCATTG
GCGGTGGCCG AGGCCCTGGA CCTCACCGTG GCCGATATGC GCTTCGTACG GCCCCTTGAC
GAGGCCCTGA TCCGTGAGCT GGCGGACACC CACGACCTGC TGGTGACCGT GGAGGAGAAC
GCGGTGGCGG GTGGTGCCGG CAGCGGGGTG AGCGAGTACC TGGCCCGGGC CGGTCTGGAC
GTCCCGGTGC GCCACCTCGG CCTGCCGGAC CGTTTCGTTG ACCACGGCAC TCCGGCGGAA
CTGCTCGCCG AGGTGGGCCT GGACGAGGCC GGCCTTCAGC GCAGTCTACA GGGGTGGCTC
GACACCCTCC CGGGCGCGTC ACGCTGA
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| Protein sequence | MSVSIDDYPL LAQVPDPEAL RTLPAHRLPA LAKELRHYLL HSVARSGGHL AAGLGAVELT
LALHYVFNTP EDRLVWDVGH QCYPHKILTG RRERLGTIRK YGGLAGFPKR AESPYDTFGV
GHSSTSISAA LGMALAARQA GEQRKAVAII GDGGMTAGEA FEAMNHAGDA GADLLVVLND
NEMSISENVG ALSQHLTRIL SGRWYHQLRS GSKEVLRRLP PPVHELARRT EEHLKGMVVP
GTLFEELGFQ YFGPVDGHNV DALVEVLGNL AHQRGPRLLH VVTCKGKGYR PAEQDPIAYH
GVGQFDPEQG LPKKSGGSLA YNQVFGRWLC AMAEQDPRLV AITPAMREGS GMVEYARRFP
ERYHDVGIAE QHAVTLAAGL ACESVKPVLA IYSTFLQRGY DQLVHDVALQ NLPVLFAVDR
AGLVGADGPT HHGSFDLSYL RCVPNMTIAA PSDEAECWRL LSTGYHHDGP FAVRYPRGSG
PGAALPEADL DPLAIGKGVC RRRGRRIAVL AFGTLVVPAL AVAEALDLTV ADMRFVRPLD
EALIRELADT HDLLVTVEEN AVAGGAGSGV SEYLARAGLD VPVRHLGLPD RFVDHGTPAE
LLAEVGLDEA GLQRSLQGWL DTLPGASR
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