Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_4486 |
Symbol | |
ID | 4094548 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008061 |
Strand | - |
Start bp | 1736743 |
End bp | 1738683 |
Gene Length | 1941 bp |
Protein Length | 646 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638017774 |
Product | 1-deoxy-D-xylulose-5-phosphate synthase |
Protein accession | YP_624341 |
Protein GI | 107026830 |
COG category | [H] Coenzyme transport and metabolism [I] Lipid transport and metabolism |
COG ID | [COG1154] Deoxyxylulose-5-phosphate synthase |
TIGRFAM ID | [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGGGCGC GTTTGATTTC CTACAATGGA ACGACGATGT ACGACTTGCT GAAAACCATC GACGACCCGG CGGATTTGCG CCGCCTCGAT CGTCGCCAAC TGCAACCGCT CGCGGATGAA CTGCGCGCGT TCGTGCTCGA CAGCGTGTCG AAGACGGGCG GCCATTTGTC GTCCAACCTC GGGACGGTCG AGCTGACGAT CGCGTTGCAC TACGTGTTCA ACACGCCGAA CGATCGCATC GTCTGGGACG TGGGTCACCA GACCTACCCC CACAAGATCC TGACGGGCCG CCGCGACCAG ATGCATTCGC TGCGTCAGTA CGACGGCATC TCGGGCTTCC CGCGCCGCAG CGAGTCGGAA TACGACACGT TCGGCACCGC GCACTCGAGC ACGTCGATCT CGGCGGCGCT CGGCATGGCG ATCGGCAGCC AGCTGAACGG CGACGACCGC TTCTCGATCG CGGTGATCGG CGACGGCGCG ATGACGGCCG GCATGGCGTT CGAGGCGATG AACAACGCGG GCGTGTCGGA AGATGCGAAG CTGCTCGTGA TCCTCAACGA CAACGACATG TCGATCTCGC CGCCGGTCGG CGCGCTGAAT CGCCATCTCG CCCGCCTGAT GTCGGGCCGC TTCTATGCGG CTGCGCGCGC GGGCGTCGAG CGCGTGCTGA GCGTGGCGCC GCCGGTGCTC GAACTCGCGC GCAAGCTCGA GGAGCATGCG AAGGGCATGG TCGTGCCGGC CACGCTGTTC GAGGAGTTCG GCTTCAACTA CATCGGCCCG ATCGATGGTC ACGATCTCGA TTCGCTGATC CCGACGCTGC AGAACATCCG CGAACTGCGC GGCCCGCAGT TCCTGCACGT GGTGACGAAG AAAGGCCAGG GCTACAAGCT CGCCGAAGCC GATCCGGTGC TCTATCACGG CCCCGGCAAG TTCAACCCGG CCGAAGGCAT CAAGCCGTCG ACGACGCCCG CGAAGAAGAC TTACACGCAG GTGTTCGGCG AGTGGCTGTG CGACGAAGCC GAGCGCGATA CGCGCGTGGT CGGCATCACG CCCGCGATGC GCGAAGGTTC GGGCATGGTC GAGTTCGAGA AGCGCTTCAA GGATCGCTAC TACGACGTGG GCATCGCCGA GCAGCACGCG GTGACGTTCG CGGGCGGTCT CGCGACCGAG GGGCTGAAGC CCGTCGTCGC GATCTACTCG ACGTTCCTGC AACGTGCGTA CGACCAGTTG ATCCACGACG TCGCGCTGCA GAACCTGCCG GTCGTGTTCG CGATCGATCG CGCGGGCCTC GTCGGCGCGG ACGGCGCGAC GCATGCGGGC GCATACGATC TCGCGTTCAT GCGCTGCATC CCGAACATGA CGATCATGGC CGCGTCCGAC GAGAACGAAT GCCGCCAGAT GCTGCACACG GCGCTGCAGC AGCCGAACCC GACTGCGGTG CGTTATCCGC GCGGCGCGGG CACGGGCGTG GCGACGGTGA AGGAATTCAC CGAGATCCCG CTCGGCAAGG GTGAAGTGCG TCGCCGCACG TCGCAGCCGG AAGGCAAGCG CGTCGCGATC CTCGCGTTCG GCACGATGGT TGCACCGTCG CTCGCCGCTG CCGAGGAACT CGATGCAACG GTCGCGAACA TGCGCTTCGT GAAGCCGGTC GATGCGGCGC TCGTGCGCGA GCTGGCCGAA ACGCACGACT ACCTCGTCAC GGTCGAGGAA GGCTGCGTGA TGGGTGGCGC GGGCTCGGCC TGCGTGGAAG CCCTGATGGA GAGTGGGGTT ATCCGACCCG TACTACAATT GGGCCTCCCT GACCAGTTCG TCGACCACGG CGACCACGCG AAGCTGCTGG CGCAATGCGG CCTCGACGGC GCGGGCATCG CGAAGTCGAT TCGCGAACGC TTCCTGAGCC CGGCGGCCGA TGTCGCCGGC CACGCGAAGC GCGTCGCATA A
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Protein sequence | MRARLISYNG TTMYDLLKTI DDPADLRRLD RRQLQPLADE LRAFVLDSVS KTGGHLSSNL GTVELTIALH YVFNTPNDRI VWDVGHQTYP HKILTGRRDQ MHSLRQYDGI SGFPRRSESE YDTFGTAHSS TSISAALGMA IGSQLNGDDR FSIAVIGDGA MTAGMAFEAM NNAGVSEDAK LLVILNDNDM SISPPVGALN RHLARLMSGR FYAAARAGVE RVLSVAPPVL ELARKLEEHA KGMVVPATLF EEFGFNYIGP IDGHDLDSLI PTLQNIRELR GPQFLHVVTK KGQGYKLAEA DPVLYHGPGK FNPAEGIKPS TTPAKKTYTQ VFGEWLCDEA ERDTRVVGIT PAMREGSGMV EFEKRFKDRY YDVGIAEQHA VTFAGGLATE GLKPVVAIYS TFLQRAYDQL IHDVALQNLP VVFAIDRAGL VGADGATHAG AYDLAFMRCI PNMTIMAASD ENECRQMLHT ALQQPNPTAV RYPRGAGTGV ATVKEFTEIP LGKGEVRRRT SQPEGKRVAI LAFGTMVAPS LAAAEELDAT VANMRFVKPV DAALVRELAE THDYLVTVEE GCVMGGAGSA CVEALMESGV IRPVLQLGLP DQFVDHGDHA KLLAQCGLDG AGIAKSIRER FLSPAADVAG HAKRVA
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