| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_1811 |
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| Symbol | |
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| ID | 6201246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010581 |
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| Strand | + |
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| Start bp | 2059384 |
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| End bp | 2061312 |
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| Gene Length | 1929 bp |
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| Protein Length | 642 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641705801 |
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| Product | 1-deoxy-D-xylulose-5-phosphate synthase |
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| Protein accession | YP_001832928 |
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| Protein GI | 182678782 |
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| COG category | [H] Coenzyme transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1154] Deoxyxylulose-5-phosphate synthase |
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| TIGRFAM ID | [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.776218 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGGACAG ATTCGAAGAC TCCCCTTCTC GATACGATCG CCACTCCCAC AGATCTCCGC
CGTTTGAAGG AATCGGACCT GGCGCAGCTC GCTGATGAGT TGCGTACTGA GACGATTGAT
GCGGTTTCGG TCACGGGTGG CCATCTCGGC GCCGGTCTCG GCGTCGTCGA GTTGACAGTC
GCCCTGCATT ACGTTTTTGA CACACCGCAC GATCGGCTGA TCTGGGACGT CGGTCATCAG
GCCTATCCGC ACAAGATTCT GACGGGACGG CGTGACCGGA TTCGCACGCT GCGGCGTGCA
GGCGGATTGT CTGGATTCAC CAAACGGTCC GAAAGCGTTT ATGATCCCTT CGGCACCGCT
CATTCCTCGA CGTCGATCTC CGCTGGTCTC GGCATGGCAG CGGCGACCAC GCTTTCGGGT
GGCAATAATA ATGTTATCGC CGTGATTGGC GACGGCTCCA TGTCAGCCGG CATGGCCTAT
GAGGCCATGA ATAATGCCGG CGCCATGCAT TCCCGTCTCA TTATCATTTT GAATGATAAT
GAAATGTCGA TCGCTCCGCC GGCAGGAGCG CTTTCCGCTT ATCTCGCTCG CCTTGTCTCG
GGCGGCACCT ATCGCACGGT TCGCGAAGCC GCCAAGCAGC TTGGCCGGCA TTTGCCGCAT
TTCATTTATG ACCGCGCCCG CAAAACCGAG GAATTCGCCC GGAACTTCTG GGCCGGCGGC
ACGATGTTCG AGGAGCTTGG CATCTATTAT GTCGGCCCGA TCGACGGTCA TAATCTCGAC
CATCTGCTGC CCGTCCTGAA AAATGTCCGC GATTTCAAGG AAACGGGACC CATTCTCGTC
CATGTCGTGA CGCAAAAGGG CAAGGGCTAT GCGCCGGCCG CCGCGGCGAG CGACAAATAT
CACAGCGTCA ATACCTTCGA CGTCGTCACC GGTGTCCAGA CCAAGCCCAA GGCCAACGCG
CCGTCTTATA CGCGCGTCTT TGCCGATGCC CTGGTCAAGG AGGCCGAGCG CGACGACAAG
ATCGTGGCGA TCACCGCCGC CATGCCGGGG GGCACTGGCC TCGACGTGTT TGGCAAAGCC
TTTCCTGAGC GCACATTCGA CGTCGGCATT GCCGAGCAGC ATGCCGTGAC CTTCGCGGCT
GGTCTCGCGA CCGAAGGCTA TCGCCCCTTC TGCGCCCTGT ATTCCACCTT CCTTCAGCGC
GGCTATGATC AGGTCGTGCA TGATGTGGCG ATACAGAATC TGCCTGTTCG CTTCGCCATC
GACCGCGCAG GCCTCGTCGG CGCCGATGGC GCGACCCATG CGGGTTCGTT CGATGTGTCC
TATCTCGGCA TTTTGCCGAA TATGGTGATC ATGGCCGCCG CCGATGAAGC GGAGCTCGTC
CATATGGTCG CGACGGCCGC CGCCTATGAT GAAGGCCCAA TCGCTTTCCG TTATCCACGT
GGCGAGGGTG TCGGCATCGA ATTGCCGCAA ATCGGCGAAA TTCTCGATAT CGGCCGTGGC
CGTATCGTGC GGGAAGGCAC GACGGTAGCC CTCCTGTCGC TCGGGACGCG CCTTGCGGAA
GCCTCAAAGG CGGCGGAGCA ATTGGCGAGC TATGGCATTT CCGTCACGGT CGCCGATGCG
CGTTTCGCCA AGCCCCTCGA TCTCGATCTC GTGCGGCGGC TCGCCAAGAA TCATGAGGTT
TTGATCACCA TCGAGGAAGG CAGCGTCGGC GGTTTCGGTT CCTTCGTCAT GCAGGCCCTG
GCCGAGGAAG GCTTGCTGGA TGGAACGGGT CTCAAATTCC GCTCCATGGT TCTGCCTGAC
ACGTTCCTCG ATCACGACAA GCCGGAAAAG CTCTATGCCC AGGCCGGCCT CGACGCCAAG
GGCATTGTGG CCAAGGTTCT CGCGACGCTG GGACGCGAGA ACGAAGCCCA TCAAAGCCTG
ATTGCCTGA
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| Protein sequence | MRTDSKTPLL DTIATPTDLR RLKESDLAQL ADELRTETID AVSVTGGHLG AGLGVVELTV
ALHYVFDTPH DRLIWDVGHQ AYPHKILTGR RDRIRTLRRA GGLSGFTKRS ESVYDPFGTA
HSSTSISAGL GMAAATTLSG GNNNVIAVIG DGSMSAGMAY EAMNNAGAMH SRLIIILNDN
EMSIAPPAGA LSAYLARLVS GGTYRTVREA AKQLGRHLPH FIYDRARKTE EFARNFWAGG
TMFEELGIYY VGPIDGHNLD HLLPVLKNVR DFKETGPILV HVVTQKGKGY APAAAASDKY
HSVNTFDVVT GVQTKPKANA PSYTRVFADA LVKEAERDDK IVAITAAMPG GTGLDVFGKA
FPERTFDVGI AEQHAVTFAA GLATEGYRPF CALYSTFLQR GYDQVVHDVA IQNLPVRFAI
DRAGLVGADG ATHAGSFDVS YLGILPNMVI MAAADEAELV HMVATAAAYD EGPIAFRYPR
GEGVGIELPQ IGEILDIGRG RIVREGTTVA LLSLGTRLAE ASKAAEQLAS YGISVTVADA
RFAKPLDLDL VRRLAKNHEV LITIEEGSVG GFGSFVMQAL AEEGLLDGTG LKFRSMVLPD
TFLDHDKPEK LYAQAGLDAK GIVAKVLATL GRENEAHQSL IA
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