| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_1145 |
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| Symbol | |
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| ID | 5368432 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinomonas sp. MWYL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009654 |
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| Strand | - |
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| Start bp | 1277931 |
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| End bp | 1279808 |
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| Gene Length | 1878 bp |
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| Protein Length | 625 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640803484 |
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| Product | deoxyxylulose-5-phosphate synthase |
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| Protein accession | YP_001340009 |
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| Protein GI | 152995174 |
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| COG category | [H] Coenzyme transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1154] Deoxyxylulose-5-phosphate synthase |
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| TIGRFAM ID | [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.820706 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGAAG AGATACCTAC AGCGCGACCT GACACGCCGC TACTTGATGA AGTCAACTCA
CCAGCTGACT TACGCGCCTT TAAAAAAGAG CAATTGCCAG CTCTTGTCCG CGAATTACGA
GAGTTCATGC TTTACAGTGT TGGACAAACT GGCGGCCATT TTGGCGCAGG TCTTGGTGTC
GTAGAACTTA CGGTTGCCCT GCATTATTTA TACAACACAC CAGAAGATCG CATTGTTTGG
GATGTAGGTC ATCAAGCCTA CCCCCATAAA ATTTTAACGG GTCGTCGTGA AGCTTTGCTC
AACATTCGAC AAGAAAACGG TATATCGGGA TTCCCCAAAC GCGATGAAAG TGAATACGAT
ACTTTTGGTG TTGGTCATTC AAGTACGTCT ATTGGTGCTG CACTGGGTAT GTCTCTCGCT
GCACGACAAC TAAAAACTGG CCGCAAAGCT GTTGCTATCA TTGGCGACGG AGCCATGTCT
GCAGGCATGT CATTCGAAGC ACTTAATCAC GCAGGTGATG TTAAAGCTGA CATGTTGGTC
ATTTTAAATG ACAACGAAAT GTCCATATCA AAACCAGTTG GTGCATTATC TAGTTACTTT
GCTCGCATAT GGGCCAGCAA GACCTACGAC AACATTAGAG AAGGTGGAAG AAAAGTCTTC
TCAGGCTTAC CTTCTGCATT AGAACTCGCT CGTAAAGCCG AAGAACACAT GAAAGGTATG
GTATCGCCTG GTATGATGTT TGAGGAGCTA GGTTTTAACT ATATCGGGCC AATTGATGGT
CACGATATGG ATCATTTATT GACAACCATT GCCAATTTGA AAGACAGAAA GGGACCTCAA
TTCCTGCATG TCATCACCAA AAAAGGCAAA GGCTTTGAAC CTGCTGAAGG TGATCCAATA
GGCTATCACG CCATCAATAA GATAGAACCA GACCCAAAAC CCAATGTAGA CAAAAGCAAA
TTGCCCAAAT ACTGCAATGT CTTTGGTAAA TGGGTATGTG ATGCCGCCGA ACAAGACGAC
AAATTGGTTG CTATCACGCC AGCTATGAAA GAAGGCTCTG ACCTCATTGA ATTTGCTGAT
CGCTTTCCAG AGCGATATTT TGATGTTGCC ATTGCTGAAC AACATGCCGT GACATTAGCA
GCCGGAATGG CTTGCGATGG AATCAAACCC GTAGTTGCAA TTTACTCAAC TTTCCTACAG
CGTGCCTACG ATCAACTTAT TCACGATGTT GCCTTGCAGA ATTTGGATGT TTTATTCGCC
ATTGATCGAG CAGGATTGGT GGGTGAAGAT GGTCCTACTC ATGCTGGTGT TTACGATTTA
AGCTATCTTC GTTGTATTCC AAACATGGTT GTTATGGCTC CATCAGACGA AGACGAATGC
CGTAAAATGC TACAAACTGG CTATGAATAC AAAGGCCCAG CTGCAGTACG TTATCCGCGA
GGAACAGGCC AAGGCGTCGA CATTGAATCA ACACTAAGCA CACTTAAAAT TGGTAAGTCT
CGTACGCTAC GCACAGGGCA ATCAGGTATT GTTATCTGTG GCTTTGGCCG CCCTACTTAC
GATGCGCTAA AAGCTGCGAA TACATTAGAC GCAACCTTGC TCGACATGCG CTTTGTTAAA
CCGATCGATG AAGAAACGTT ACTTACTCAT CGCGATGCAA AGCTCATCGT CACCGTTGAA
GAAAATGCCA TCATGGGCGG AGCAGGATCA GCAGTTAGTG AGTTGCTAAT TGCGAACAAT
ATAAACATTC CAACGCTTCA CCTTGGTCTT CCAGATCAAT ATGAAGAACA TGCTAGCCAT
GCTTCCATGC TAAAACGCGT AGGACTGGAT GCAGATGGTA TTCAGAAATC CATCGAGTTA
AAACTGACCC ATTTGTAA
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| Protein sequence | MFEEIPTARP DTPLLDEVNS PADLRAFKKE QLPALVRELR EFMLYSVGQT GGHFGAGLGV
VELTVALHYL YNTPEDRIVW DVGHQAYPHK ILTGRREALL NIRQENGISG FPKRDESEYD
TFGVGHSSTS IGAALGMSLA ARQLKTGRKA VAIIGDGAMS AGMSFEALNH AGDVKADMLV
ILNDNEMSIS KPVGALSSYF ARIWASKTYD NIREGGRKVF SGLPSALELA RKAEEHMKGM
VSPGMMFEEL GFNYIGPIDG HDMDHLLTTI ANLKDRKGPQ FLHVITKKGK GFEPAEGDPI
GYHAINKIEP DPKPNVDKSK LPKYCNVFGK WVCDAAEQDD KLVAITPAMK EGSDLIEFAD
RFPERYFDVA IAEQHAVTLA AGMACDGIKP VVAIYSTFLQ RAYDQLIHDV ALQNLDVLFA
IDRAGLVGED GPTHAGVYDL SYLRCIPNMV VMAPSDEDEC RKMLQTGYEY KGPAAVRYPR
GTGQGVDIES TLSTLKIGKS RTLRTGQSGI VICGFGRPTY DALKAANTLD ATLLDMRFVK
PIDEETLLTH RDAKLIVTVE ENAIMGGAGS AVSELLIANN INIPTLHLGL PDQYEEHASH
ASMLKRVGLD ADGIQKSIEL KLTHL
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