Gene BMA10247_A0364 details

Gene Information

• Locus tag: BMA10247_A0364
• Symbol: dxs
• ID: 4889663
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia mallei NCTC 10247
• Kingdom: Bacteria
• Replicon accession: NC_009079
• Strand: +
• Start bp: 320471
• End bp: 322426
• Gene Length: 1956 bp
• Protein Length: 651 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 640146642
• Product: 1-deoxy-D-xylulose-5-phosphate synthase
• Protein accession: YP_001077568
• Protein GI: 126445825
• COG category: [H] Coenzyme transport and metabolism; [I] Lipid transport and metabolism
• COG ID: [COG1154] Deoxyxylulose-5-phosphate synthase
• TIGRFAM ID: [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGGCGCGC AAGAAGTGCG GGCGCGTTTG TTTTCCTACA ATGGAACGAC GATGTACGAC 
TTGCTGAAAA CCATCGACGA TCCGGCGGAC CTGCGCCGTC TCGATCGTCG CCAACTGCAG 
CCGCTCGCCG ACGAGCTGCG CGCGTTCGTC CTCGACAGCG TGTCGAAGAC GGGCGGCCAT 
TTGTCGTCCA ATCTCGGCAC GGTCGAGCTG ACGATCGCGC TGCATTACGT GTTCAATACG 
CCGGACGACC GGATCGTGTG GGACGTCGGT CACCAGACCT ATCCGCACAA GATCCTGACG 
GGCCGCCGCG ACGGGATGAA GACGCTGCGC CAGTTCGACG GCATCTCGGG CTTTCCGCGC 
CGCTCGGAAT CCGAATACGA CACGTTCGGC ACCGCACACT CGAGCACGTC GATCTCGGCC 
GCGCTCGGGA TGGCGATCGG CAGCAAGCTG AACGGCGACG ACCGCTTCTC GATCGCGGTG 
ATCGGCGACG GCGCGATGAC GGCCGGCATG GCGTTCGAGG CGATGAACAA CGCGGGCGTG 
TCGGAGGACG CGAAGCTGCT CGTGATCCTG AACGACAACG ACATGTCGAT CTCGCCGCCC 
GTCGGCGCGC TGAATCGCCA TCTCGCGCGC CTGATGTCGG GCCGCTTCTA CGCGGCCGCG 
CGTGCGGGCG TGGAGCGCGT GCTGAGCGTC GCGCCGCCCG TGCTGGAGCT CGCGCGCAAG 
CTCGAGGAGC ATGCGAAGGG CATGGTCGTG CCGGCCACCC TCTTCGAGGA ATTCGGCTTC 
AACTACATCG GGCCGATCGA CGGGCACGAT CTCGATTCGC TGATCCCGAC GCTGCAGAAC 
ATCAAGGAGC TGCGCGGGCC GCAGTTCCTG CACGTCGTGA CGAAGAAGGG CCAGGGCTAC 
AAGCTCGCCG AGGCCGACCC GGTGCTCTAT CACGGGCCCG GCAAGTTCAA CCCGGCGGAA 
GGCATCAAAC CGTCGACGAC GCCCGCGAAG AAGACCTACA CGCAAGTGTT CGGCGAATGG 
CTGTGCGACG CGGCGGAACT CGATGCGCGC GTGGTCGGCA TCACGCCCGC GATGCGCGAA 
GGCTCGGGCA TGGTCGAGTT CGAGAAACGC TTCCCGGAGC GCTACTACGA CGTCGGCATC 
GCCGAGCAGC ACGCGGTGAC GTTCGCGGGC GGCCTCGCGA CGGAAGGGCT CAAGCCTGTC 
GTGGCGATCT ATTCGACGTT CCTGCAGCGC GCTTATGATC AGCTGATTCA CGACGTCGCG 
CTGCAGAACC TGCCCGTCGT GTTCGCGATC GACCGCGCGG GCCTCGTCGG CGCGGACGGC 
GCGACGCACG CGGGCGCGTA CGATCTCGCG TTCCTGCGCT GCATTCCGAA CATGACGGTG 
ATGGCCGCGT CGGACGAGAA CGAGTGCCGC CAGATGCTGC ATACCGCGCT GCAACAGCCG 
AACCCGACCG CCGTGCGTTA TCCGCGCGGC GCGGGCACGG GCGTTGCCAC CGTCAAGGCG 
TTTACCGAGA TCCCGCTCGG CAAGGGCGAA GTGCGCCGCC GCACGTCGCA GCCGGACGGC 
AAGCGCATCG CGATTCTCGC GTTCGGCACG ATGGTGGCGC CGTCGCTCGC GGCGGCCGAC 
GCGCTTGACG CGACCGTCGC GAACATGCGC TTCGTGAAGC CGATCGACGC CGAGCTCGTG 
CAAGCGCTCG CGCGGACGCA CGACTACCTC GTCACCGTCG AGGAGGGCTG CGTGATGGGC 
GGCGCGGGTT CCGCATGCGT CGAGGCGATG ATGGAAAGCG GCGCCGTCCG CCCGGTGCTG 
CAGCTCGGCT TGCCGGACCG TTTCGTCGAT CACGGCGATC CGGCGAAGCT GCTGTCGCTG 
TGCGGCCTCG ACGGCGACGG CATCGCCAAA TCGATTCGCG AACGCTTCCT GAGCCACGCG 
GCGGACGTCG CGAGCCCGGC GAAGCGCGTC GCATAA 

 

Protein sequence

MGAQEVRARL FSYNGTTMYD LLKTIDDPAD LRRLDRRQLQ PLADELRAFV LDSVSKTGGH 
LSSNLGTVEL TIALHYVFNT PDDRIVWDVG HQTYPHKILT GRRDGMKTLR QFDGISGFPR 
RSESEYDTFG TAHSSTSISA ALGMAIGSKL NGDDRFSIAV IGDGAMTAGM AFEAMNNAGV 
SEDAKLLVIL NDNDMSISPP VGALNRHLAR LMSGRFYAAA RAGVERVLSV APPVLELARK 
LEEHAKGMVV PATLFEEFGF NYIGPIDGHD LDSLIPTLQN IKELRGPQFL HVVTKKGQGY 
KLAEADPVLY HGPGKFNPAE GIKPSTTPAK KTYTQVFGEW LCDAAELDAR VVGITPAMRE 
GSGMVEFEKR FPERYYDVGI AEQHAVTFAG GLATEGLKPV VAIYSTFLQR AYDQLIHDVA 
LQNLPVVFAI DRAGLVGADG ATHAGAYDLA FLRCIPNMTV MAASDENECR QMLHTALQQP 
NPTAVRYPRG AGTGVATVKA FTEIPLGKGE VRRRTSQPDG KRIAILAFGT MVAPSLAAAD 
ALDATVANMR FVKPIDAELV QALARTHDYL VTVEEGCVMG GAGSACVEAM MESGAVRPVL 
QLGLPDRFVD HGDPAKLLSL CGLDGDGIAK SIRERFLSHA ADVASPAKRV A