| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_1833 |
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| Symbol | |
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| ID | 5160112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidiphilium cryptum JF-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009484 |
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| Strand | + |
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| Start bp | 2023304 |
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| End bp | 2025247 |
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| Gene Length | 1944 bp |
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| Protein Length | 647 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640553755 |
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| Product | 1-deoxy-D-xylulose-5-phosphate synthase |
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| Protein accession | YP_001234954 |
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| Protein GI | 148260827 |
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| COG category | [H] Coenzyme transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1154] Deoxyxylulose-5-phosphate synthase |
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| TIGRFAM ID | [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCCGC AGACTCCCCT GCTGGATCGT GTCCGCGTTC CGAGCGACCT GCGCAATTTC
TCCGCCGACC AGCTCCGCCA GCTCGCCGGG GAATTGCGCG CCGAAACGAT CGACACCGTT
TCCGTGACCG GCGGGCACCT GGGCGCGTCG CTCGGCGTCG TCGAGCTGAC GGTGGCCCTG
CACGCGGTGT TCGAGACCCC GCGGGATCGC CTGATCTGGG ATGTCGGCCA TCAGACCTAT
CCGCACAAGA TCCTCACCGG CCGGCGCGAT CGCATCCGTA CACTGCGCCA GCCCGGCGGG
CTGTCCGGCT TCACGCGCCG TTCCGAAAGC GAATACGATC CGTTCGGGGC CGCCCATTCC
TCGACGTCGA TTTCGGCCGG CCTGGGCATG GCCGTGGCCC GCGACCTGAA GGATGAATCC
CCTAAGCGTC ACGTCATCGC CGTGATCGGC GACGGGGCGA TGTCCGCCGG CATGGCCTAT
GAGGCGATGA ACAACGCGGG CGCCAGCAAG TCCCGCATGA TCGTCATCCT CAACGACAAC
GACATGTCGA TCGCGCCGCC GGTCGGCGCG ATGAGCGCCT ACCTCTCGCG GCTGATCTCC
TCGCGCAGCT TCCTCTCGAT CCGCGATTTC GCCGCCCGGA TGGCGAAACG CTTCCCCCGC
ACGCTCGAAC GCACGGCCAA GCGCGCCGAG GAATACGCCC GCGGAATCCT TACCGGCGGC
ACGCTGTTCG AGGAGCTGGG CTTTTATTAT GTGGGCCCGA TCGACGGCCA TAATCTCGAC
CATCTTCTTC CGGTCCTGCG CAATCTGCGC GACATCGACG GCGACGAGCC GATCCTGCTC
CATGTCGTCA CCCAGAAGGG CAAGGGCTAC GCACCGGCCG AGGCGTCGGC CGACAAGTAT
CACGGCGTCT CGAAGTTCAA CGTCGTCACC GGCGAGCAGA CCAAGGCGCC GCCGGGACCG
CCCTCTTATA CAAAGGTGTT CGCCCAGGCG CTGATCGCCG AGGCGGAACA TAATCCGAAC
GTCGTCGCGG TCACCGCGGC GATGCCGAGC GGCACCGGCC TCGACGCCTT CGCCAAGCGC
TTCCCGGACC GCTGCTTCGA TGTCGGCATC GCCGAACAGC ACGCCGTGAC CTTCGCCGCC
GGCATGGCGA CCGAGGGCAT GGCGCCGTTC TGCGCCATCT ATTCCACCTT TCTCCAGCGC
GCCTACGACC AGGTCGTGCA TGACGTGGCG ATCCAGTCCC TGCCCGTGCG CTTCGCCATG
GACCGCGCCG GCCTCGTCGG CGCGGACGGT GCCACCCATG CCGGCGCCTA CGACCTCGCC
TATCTCGGCT GCCTCCCCGG AATGGTGATC ATGGCACCGT CCGATGAGGC GGAACTGATG
AACTGCGTTG CCACCGCGGC CGCGATCGAC GACCGCCCGT CCGCGTTCCG CTATCCGCGC
GGCGAGGGCA CCGGCGTCCA GCTCCCTGCG CGCGGAACGC CATGGGAAAT CGGCAAGGGA
CGAATCGTGC GCGAAGGCAG CAAGGTGGCC GTCCTGGCGC TCGGCCCACG CCTGGCCGAA
GCGCTGAAGG CAGCGGACGA ACTCGCGGCG CGCGGCTTCC CCGCAACCGT CGCCGATGCC
CGCTTCATGA AGCCGCTCGA TACCGCGCTG GTGGACCAGC TTGCCCGTCA TCACGAAGTC
CTGATCACGA TCGAGGATGG TTCGAGCGGC GGCTTCGGCG CGGCTGTCGG CCACCATCTC
GCCTGGTCGG GCGCGTTCGA CTCAGGGCTG CGATTCCGCC CGATGACGCT TCCGGACCGC
TTCATCGACC ACAACTCACC CGCCGGCCAG CTGATCGATG CCGGACTTAC CGCGAAGGAT
ATCGTGGCGC ACGCGCTCGG CGCGCTCGGT CGCGGAGCCG TGCCCGAAAA TTCGCACGGT
TCGGTCGCAA TTCCGGCACG TTGA
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| Protein sequence | MPPQTPLLDR VRVPSDLRNF SADQLRQLAG ELRAETIDTV SVTGGHLGAS LGVVELTVAL
HAVFETPRDR LIWDVGHQTY PHKILTGRRD RIRTLRQPGG LSGFTRRSES EYDPFGAAHS
STSISAGLGM AVARDLKDES PKRHVIAVIG DGAMSAGMAY EAMNNAGASK SRMIVILNDN
DMSIAPPVGA MSAYLSRLIS SRSFLSIRDF AARMAKRFPR TLERTAKRAE EYARGILTGG
TLFEELGFYY VGPIDGHNLD HLLPVLRNLR DIDGDEPILL HVVTQKGKGY APAEASADKY
HGVSKFNVVT GEQTKAPPGP PSYTKVFAQA LIAEAEHNPN VVAVTAAMPS GTGLDAFAKR
FPDRCFDVGI AEQHAVTFAA GMATEGMAPF CAIYSTFLQR AYDQVVHDVA IQSLPVRFAM
DRAGLVGADG ATHAGAYDLA YLGCLPGMVI MAPSDEAELM NCVATAAAID DRPSAFRYPR
GEGTGVQLPA RGTPWEIGKG RIVREGSKVA VLALGPRLAE ALKAADELAA RGFPATVADA
RFMKPLDTAL VDQLARHHEV LITIEDGSSG GFGAAVGHHL AWSGAFDSGL RFRPMTLPDR
FIDHNSPAGQ LIDAGLTAKD IVAHALGALG RGAVPENSHG SVAIPAR
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