More than 300 homologs were found in PanDaTox collection
for query gene Gmet_2822 on replicon NC_007517
Organism: Geobacter metallireducens GS-15



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011725  BCB4264_A4287  1-deoxy-D-xylulose-5-phosphate synthase  50.64 
 
 
630 aa  648    Bacillus cereus B4264  Bacteria  unclonable  0.000332787  n/a   
 
 
-
 
NC_013173  Dbac_0943  deoxyxylulose-5-phosphate synthase  59.27 
 
 
635 aa  744    Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_002936  DET0745  1-deoxy-D-xylulose-5-phosphate synthase  50.79 
 
 
647 aa  645    Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU0686  1-deoxy-D-xylulose-5-phosphate synthase  81.63 
 
 
637 aa  1045    Geobacter sulfurreducens PCA  Bacteria  normal  0.351489  n/a   
 
 
-
 
NC_002939  GSU1764  1-deoxy-D-xylulose-5-phosphate synthase  61.8 
 
 
626 aa  790    Geobacter sulfurreducens PCA  Bacteria  normal  0.0479282  n/a   
 
 
-
 
NC_010184  BcerKBAB4_4029  1-deoxy-D-xylulose-5-phosphate synthase  50.32 
 
 
630 aa  644    Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.000105298  n/a   
 
 
-
 
NC_012793  GWCH70_2319  1-deoxy-D-xylulose-5-phosphate synthase  52.96 
 
 
630 aa  658    Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_1018  1-deoxy-D-xylulose-5-phosphate synthase  78.33 
 
 
637 aa  1009    Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_002977  MCA0817  1-deoxy-D-xylulose-5-phosphate synthase  52.62 
 
 
639 aa  639    Methylococcus capsulatus str. Bath  Bacteria  normal  0.64849  n/a   
 
 
-
 
NC_011899  Hore_06530  deoxyxylulose-5-phosphate synthase  56.91 
 
 
636 aa  745    Halothermothrix orenii H 168  Bacteria  hitchhiker  0.0000000000553997  n/a   
 
 
-
 
NC_003909  BCE_4249  1-deoxy-D-xylulose-5-phosphate synthase  50.64 
 
 
630 aa  648    Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.0000543695  n/a   
 
 
-
 
NC_010320  Teth514_1540  1-deoxy-D-xylulose-5-phosphate synthase  55.36 
 
 
620 aa  704    Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.00810208  n/a   
 
 
-
 
NC_013216  Dtox_2584  deoxyxylulose-5-phosphate synthase  56.66 
 
 
633 aa  704    Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.931562  normal  0.224926 
 
 
-
 
NC_013385  Adeg_1398  deoxyxylulose-5-phosphate synthase  59.25 
 
 
629 aa  712    Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS4081  1-deoxy-D-xylulose-5-phosphate synthase  50.48 
 
 
630 aa  647    Bacillus anthracis str. Sterne  Bacteria  normal  0.491332  n/a   
 
 
-
 
NC_005957  BT9727_3919  1-deoxy-D-xylulose-5-phosphate synthase  50.48 
 
 
630 aa  647    Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.000000000317792  n/a   
 
 
-
 
NC_006274  BCZK3930  1-deoxy-D-xylulose-5-phosphate synthase  50.48 
 
 
630 aa  647    Bacillus cereus E33L  Bacteria  normal  0.0146607  n/a   
 
 
-
 
NC_011658  BCAH187_A4307  1-deoxy-D-xylulose-5-phosphate synthase  50.64 
 
 
630 aa  647    Bacillus cereus AH187  Bacteria  unclonable  0.0000000950231  n/a   
 
 
-
 
NC_009455  DehaBAV1_0675  1-deoxy-D-xylulose-5-phosphate synthase  51.29 
 
 
633 aa  644    Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_0879  1-deoxy-D-xylulose-5-phosphate synthase  54.7 
 
 
618 aa  642    Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal  0.623076 
 
 
-
 
NC_011146  Gbem_1258  1-deoxy-D-xylulose-5-phosphate synthase  61.2 
 
 
646 aa  781    Geobacter bemidjiensis Bem  Bacteria  normal  0.260207  n/a   
 
 
-
 
NC_007484  Noc_1743  1-deoxy-D-xylulose-5-phosphate synthase  51.36 
 
 
640 aa  637    Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_2235  1-deoxy-D-xylulose-5-phosphate synthase  73.06 
 
 
622 aa  934    Geobacter lovleyi SZ  Bacteria  normal  0.77755  n/a   
 
 
-
 
NC_007498  Pcar_1667  1-deoxy-D-xylulose-5-phosphate synthase  62.58 
 
 
634 aa  795    Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00000640226  n/a   
 
 
-
 
NC_011769  DvMF_0126  1-deoxy-D-xylulose-5-phosphate synthase  55.93 
 
 
646 aa  701    Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.410155 
 
 
-
 
NC_011830  Dhaf_3488  deoxyxylulose-5-phosphate synthase  56.24 
 
 
631 aa  708    Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.0451312  n/a   
 
 
-
 
NC_010814  Glov_2182  1-deoxy-D-xylulose-5-phosphate synthase  62.76 
 
 
625 aa  810    Geobacter lovleyi SZ  Bacteria  normal  0.0455646  n/a   
 
 
-
 
NC_009253  Dred_1078  deoxyxylulose-5-phosphate synthase  61.53 
 
 
635 aa  783    Desulfotomaculum reducens MI-1  Bacteria  normal  0.0303047  n/a   
 
 
-
 
NC_007517  Gmet_1934  1-deoxy-D-xylulose-5-phosphate synthase  64.37 
 
 
625 aa  818    Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_2822  1-deoxy-D-xylulose-5-phosphate synthase  100 
 
 
635 aa  1287    Geobacter metallireducens GS-15  Bacteria  normal  0.553695  normal  0.10664 
 
 
-
 
NC_007519  Dde_2200  1-deoxy-D-xylulose-5-phosphate synthase  57.28 
 
 
661 aa  732    Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_4400  1-deoxy-D-xylulose-5-phosphate synthase  50.48 
 
 
630 aa  647    Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.0000595966  n/a   
 
 
-
 
NC_009483  Gura_2175  1-deoxy-D-xylulose-5-phosphate synthase  63.49 
 
 
620 aa  815    Geobacter uraniireducens Rf4  Bacteria  normal  0.0116264  n/a   
 
 
-
 
NC_010424  Daud_1027  deoxyxylulose-5-phosphate synthase  60.52 
 
 
634 aa  765    Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_007614  Nmul_A0236  1-deoxy-D-xylulose-5-phosphate synthase  51.69 
 
 
614 aa  647    Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.947213  n/a   
 
 
-
 
NC_009485  BBta_2479  1-deoxy-D-xylulose-5-phosphate synthase  52.17 
 
 
641 aa  636    Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_3362  1-deoxy-D-xylulose-5-phosphate synthase  75.79 
 
 
635 aa  985    Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_1511  1-deoxy-D-xylulose-5-phosphate synthase  60 
 
 
640 aa  721    Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_007760  Adeh_1097  1-deoxy-D-xylulose-5-phosphate synthase  54.94 
 
 
636 aa  669    Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.124796  n/a   
 
 
-
 
NC_010730  SYO3AOP1_0652  1-deoxy-D-xylulose-5-phosphate synthase  51.44 
 
 
631 aa  655    Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1662  deoxyxylulose-5-phosphate synthase  58.43 
 
 
626 aa  755    Desulfococcus oleovorans Hxd3  Bacteria  normal  0.184143  n/a   
 
 
-
 
NC_011661  Dtur_1044  deoxyxylulose-5-phosphate synthase  53.28 
 
 
618 aa  647    Dictyoglomus turgidum DSM 6724  Bacteria  normal  0.213907  n/a   
 
 
-
 
NC_012918  GM21_3025  1-deoxy-D-xylulose-5-phosphate synthase  62.15 
 
 
646 aa  791    Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007947  Mfla_2133  1-deoxy-D-xylulose-5-phosphate synthase  53.76 
 
 
614 aa  667    Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.000520629  normal 
 
 
-
 
NC_013411  GYMC61_0251  1-deoxy-D-xylulose-5-phosphate synthase  53.03 
 
 
631 aa  657    Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009675  Anae109_1136  deoxyxylulose-5-phosphate synthase  53.31 
 
 
635 aa  663    Anaeromyxobacter sp. Fw109-5  Bacteria  normal  hitchhiker  0.00423359 
 
 
-
 
NC_009012  Cthe_0828  1-deoxy-D-xylulose-5-phosphate synthase  53.11 
 
 
627 aa  652    Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_2870  1-deoxy-D-xylulose-5-phosphate synthase  50.64 
 
 
630 aa  642    Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.016121  n/a   
 
 
-
 
NC_013223  Dret_1758  deoxyxylulose-5-phosphate synthase  57.42 
 
 
633 aa  729    Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal  0.805776 
 
 
-
 
NC_008254  Meso_0735  1-deoxy-D-xylulose-5-phosphate synthase  53.88 
 
 
650 aa  642    Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B0947  1-deoxy-D-xylulose-5-phosphate synthase  50.64 
 
 
630 aa  647    Bacillus cereus G9842  Bacteria  decreased coverage  0.0000059556  decreased coverage  0.0000085811 
 
 
-
 
NC_011773  BCAH820_4197  1-deoxy-D-xylulose-5-phosphate synthase  50.48 
 
 
630 aa  647    Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.9666000000000002e-33 
 
 
-
 
NC_011883  Ddes_0956  1-deoxy-D-xylulose-5-phosphate synthase  55.16 
 
 
644 aa  670    Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.246357  n/a   
 
 
-
 
NC_013525  Tter_1852  deoxyxylulose-5-phosphate synthase  56.3 
 
 
640 aa  698    Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009719  Plav_0781  1-deoxy-D-xylulose-5-phosphate synthase  52.77 
 
 
650 aa  638    Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.128474  normal  0.356919 
 
 
-
 
NC_013552  DhcVS_652  1-deoxy-D-xylulose-5-phosphate synthase  49.6 
 
 
647 aa  639    Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_1225  deoxyxylulose-5-phosphate synthase  54.96 
 
 
636 aa  659    Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_0582  deoxyxylulose-5-phosphate synthase  54.93 
 
 
638 aa  702    Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_0832  1-deoxy-D-xylulose-5-phosphate synthase  53.61 
 
 
640 aa  659    Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.111285  n/a   
 
 
-
 
NC_010718  Nther_1694  1-Deoxy-D-xylulose-5-phosphate synthase  55.25 
 
 
631 aa  697    Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.134316  normal  0.0277937 
 
 
-
 
NC_008554  Sfum_1418  deoxyxylulose-5-phosphate synthase  61.72 
 
 
646 aa  794    Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.793105  normal  0.333041 
 
 
-
 
NC_008576  Mmc1_1048  1-deoxy-D-xylulose-5-phosphate synthase  55.66 
 
 
622 aa  684    Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_2448  deoxyxylulose-5-phosphate synthase  52.37 
 
 
631 aa  650    Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_1191  1-deoxy-D-xylulose-5-phosphate synthase  73.68 
 
 
624 aa  929    Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_2403  1-deoxy-D-xylulose-5-phosphate synthase  62.8 
 
 
626 aa  807    Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0883  1-deoxy-D-xylulose-5-phosphate synthase  76.4 
 
 
635 aa  989    Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000000207097 
 
 
-
 
NC_011145  AnaeK_1157  deoxyxylulose-5-phosphate synthase  54.96 
 
 
636 aa  660    Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_1718  1-deoxy-D-xylulose-5-phosphate synthase  54.98 
 
 
641 aa  697    Desulfovibrio vulgaris DP4  Bacteria  normal  0.0789997  normal  0.8348 
 
 
-
 
NC_007298  Daro_3061  1-deoxy-D-xylulose-5-phosphate synthase  51.37 
 
 
618 aa  635  1e-180  Dechloromonas aromatica RCB  Bacteria  hitchhiker  0.004887  hitchhiker  0.00000111191 
 
 
-
 
NC_007948  Bpro_1747  1-deoxy-D-xylulose-5-phosphate synthase  51.93 
 
 
635 aa  632  1e-180  Polaromonas sp. JS666  Bacteria  normal  normal  0.123274 
 
 
-
 
NC_010001  Cphy_2511  deoxyxylulose-5-phosphate synthase  51.05 
 
 
625 aa  632  1e-180  Clostridium phytofermentans ISDg  Bacteria  normal  0.465086  n/a   
 
 
-
 
NC_007406  Nwi_0633  1-deoxy-D-xylulose-5-phosphate synthase  52.25 
 
 
666 aa  629  1e-179  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.300424  normal 
 
 
-
 
NC_011662  Tmz1t_1774  1-deoxy-D-xylulose-5-phosphate synthase  52.18 
 
 
622 aa  629  1e-179  Thauera sp. MZ1T  Bacteria  normal  0.0951101  n/a   
 
 
-
 
NC_007952  Bxe_B2827  1-deoxy-D-xylulose-5-phosphate synthase  51.4 
 
 
635 aa  631  1e-179  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008347  Mmar10_0849  1-deoxy-D-xylulose-5-phosphate synthase  53.07 
 
 
643 aa  631  1e-179  Maricaulis maris MCS10  Bacteria  normal  normal  0.313067 
 
 
-
 
NC_010676  Bphyt_6781  1-deoxy-D-xylulose-5-phosphate synthase  50.93 
 
 
653 aa  628  1e-179  Burkholderia phytofirmans PsJN  Bacteria  normal  0.772471  hitchhiker  0.0000939262 
 
 
-
 
NC_008781  Pnap_1501  1-deoxy-D-xylulose-5-phosphate synthase  51.92 
 
 
636 aa  628  1e-178  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_2894  1-deoxy-D-xylulose-5-phosphate synthase  50.4 
 
 
623 aa  627  1e-178  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A2631  1-deoxy-D-xylulose-5-phosphate synthase  51.03 
 
 
631 aa  627  1e-178  Methylibium petroleiphilum PM1  Bacteria  normal  0.898306  normal 
 
 
-
 
NC_012856  Rpic12D_2033  1-deoxy-D-xylulose-5-phosphate synthase  50.23 
 
 
636 aa  627  1e-178  Ralstonia pickettii 12D  Bacteria  normal  0.720268  normal 
 
 
-
 
NC_012034  Athe_1288  deoxyxylulose-5-phosphate synthase  50.89 
 
 
616 aa  628  1e-178  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.0593022  n/a   
 
 
-
 
NC_008783  BARBAKC583_0400  1-deoxy-D-xylulose-5-phosphate synthase  51.67 
 
 
638 aa  625  1e-178  Bartonella bacilliformis KC583  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_2426  1-deoxy-D-xylulose-5-phosphate synthase  50.08 
 
 
636 aa  626  1e-178  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_011206  Lferr_1642  deoxyxylulose-5-phosphate synthase  52.16 
 
 
624 aa  625  1e-178  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  hitchhiker  0.0000759377 
 
 
-
 
NC_007964  Nham_0778  1-deoxy-D-xylulose-5-phosphate synthase  52.09 
 
 
668 aa  627  1e-178  Nitrobacter hamburgensis X14  Bacteria  normal  0.324929  n/a   
 
 
-
 
NC_011761  AFE_1974  1-deoxy-D-xylulose-5-phosphate synthase  52.16 
 
 
624 aa  625  1e-178  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_014248  Aazo_4395  deoxyxylulose-5-phosphate synthase  51.18 
 
 
635 aa  626  1e-178  'Nostoc azollae' 0708  Bacteria  normal  0.326234  n/a   
 
 
-
 
NC_008340  Mlg_1381  1-deoxy-D-xylulose-5-phosphate synthase  51.04 
 
 
628 aa  627  1e-178  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.604583  normal  0.510709 
 
 
-
 
NC_011138  MADE_01425  1-deoxy-D-xylulose-5-phosphate synthase  49.6 
 
 
625 aa  625  1e-178  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_0956  1-deoxy-D-xylulose-5-phosphate synthase  50.63 
 
 
629 aa  626  1e-178  Acidovorax ebreus TPSY  Bacteria  normal  0.922207  n/a   
 
 
-
 
NC_011126  HY04AAS1_1061  1-deoxy-D-xylulose-5-phosphate synthase  49.04 
 
 
627 aa  624  1e-177  Hydrogenobaculum sp. Y04AAS1  Bacteria  hitchhiker  0.00520521  n/a   
 
 
-
 
NC_007413  Ava_4532  1-deoxy-D-xylulose-5-phosphate synthase  51.1 
 
 
635 aa  624  1e-177  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_009832  Spro_1078  1-deoxy-D-xylulose-5-phosphate synthase  50.64 
 
 
621 aa  622  1e-177  Serratia proteamaculans 568  Bacteria  normal  hitchhiker  0.000138004 
 
 
-
 
NC_010002  Daci_2242  1-deoxy-D-xylulose-5-phosphate synthase  50.8 
 
 
638 aa  622  1e-177  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.0315294 
 
 
-
 
NC_007908  Rfer_2875  1-deoxy-D-xylulose-5-phosphate synthase  50.94 
 
 
632 aa  622  1e-177  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010644  Emin_0268  deoxyxylulose-5-phosphate synthase  51.28 
 
 
621 aa  623  1e-177  Elusimicrobium minutum Pei191  Bacteria  normal  normal 
 
 
-
 
NC_011059  Paes_1686  1-deoxy-D-xylulose-5-phosphate synthase  51.44 
 
 
659 aa  622  1e-177  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_3948  1-deoxy-D-xylulose-5-phosphate synthase  50.56 
 
 
632 aa  624  1e-177  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_008543  Bcen2424_3879  1-deoxy-D-xylulose-5-phosphate synthase  49.69 
 
 
646 aa  623  1e-177  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.155835 
 
 
-
 
NC_012912  Dd1591_3085  1-deoxy-D-xylulose-5-phosphate synthase  49.76 
 
 
620 aa  622  1e-177  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
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