Gene DhcVS_652 details

Gene Information

• Locus tag: DhcVS_652
• Symbol: dxs
• ID: 8657585
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides sp. VS
• Kingdom: Bacteria
• Replicon accession: NC_013552
• Strand: -
• Start bp: 610326
• End bp: 612269
• Gene Length: 1944 bp
• Protein Length: 647 aa
• Translation table: 11
• GC content: 46%
• Product: 1-deoxy-D-xylulose-5-phosphate synthase
• Protein accession: YP_003330120
• Protein GI: 270308062

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAGTACAG GATTGGAAAT TTCTATTCCG CACAACTTGG AAATGTCAAA ACTGCTAGAC 
ACAATAAATA GTCCCTCAGA CCTGAAAAAA CTTACTCTGG ACGAACTAAA TGAGCTGGCT 
GCCCAAATCC GTGAAGAGCT CGTAAACCGG GTGACTTTAA ACGGGGGACA TTTAGCCTCA 
AGCTTAGGCG TCGTTGAGCT TACTATTGCG TTGCATCGCG TTTTTGAAAG TCCCAAAGAT 
AAAATAATCT GGGACGTGGG ACATCAGTCA TATGCCCACA AACTCTTGAC CGGCCGCCGC 
GAACAGTTTG CCACACTCCG CCAGCATGGG GGGATATCCG GCTTTACCTG CCGGGATGAA 
AGCCCGCATG ACCCGTTTGG AGCAGGCCAC GCCAGCACCT CCATCTCTGC CGGGCTGGGC 
ATGGCTGTAG CCCGTGATTT GGCAAAAGCA GATTACAGCG TCATTTCAGT AATCGGAGAT 
GGAGCTATTT CCGGCGGTAT GTCCTTTGAA GCTATCAACA ATGCCGGACA CTTGCACACC 
AAGTTTATAG TCATTCTTAA TGACAACGGC ATGGCTATAT CTCCCTCCAC AGGGGCTTTA 
TCTAAATTTT TAAATAATGT CCGCTTTGAC CCGCGGTTTG AATTCGCCAA GCGGGGTGCT 
AAACAGACTA TAACCAATAT GCCTTTCGGC AAGGCTGTTT GGGCTTTTAC CAAAAGCATT 
AAACACAAAT TTGAAAAATC CATGCTTCCG GGCAGTCTTT GGGAAGAACT GGGATTTATA 
TACCTTGGGC CGGTAGATGG CCATAATATC CGCGAACTTG AGGCAGCACT TAAACGCGCC 
AAAGATTTTG AATCCCAGCC AGTACTTATC CACATGATTA CCCAAAAAGG CAAAGGCTAC 
GATGATGCTG AAGCTGATGC CGTAAAATAC CACGGTATTT CACCCAAATC AGGCGGGCTG 
AAAAGCGGCC ACGGGCAGTC GTATAGCCAG GTGTTCGGTC AGACATTACA TAAAATCATG 
TCTGACAACC CCCAAGTAGT GGCTATCACT GCCGCCATGA CTGATGGCTG CGGATTGGGT 
GAAGTTGCTG CAGACTTTCC TGATAGGGTA TTTGATGTGG GCATTTGCGA GCAGCATGCC 
GTCACTTTTG CAGCCGGAAT GGCTACCCAA GGTTACATAC CGGTCGTAGT GATCTATTCT 
ACTTTCCTCC AGCGTAGTTT TGATCAGATA ATACATGATG TCTGTTTACA AAAACTTCCG 
GTAGTCTTTG CGATTGATAG GGGAGGTATT GTGGGTGATG ATGGAAAAAC CCATCAGGGT 
ATTTTTGATT TGTCCTTCAT GTCTTTGATA CCGGATATGA TAGTAGCCGC TCCATCTGAT 
GAAAATGATC TACAACACCT GCTATATACT GCTGTAAATT CAGGCAAACC ATTTGCCATC 
CGCTACCCCA GAGGATTCGG CGAAGGGGTT GAAATGGAAA ATGGCTTACA TAATATTCCA 
ATAGGTCAAA ATGAAGTTCT GTCCACCGGT AGTGAAATAG CCATTCTCGC AACCGGTAAG 
AGCGTCGCAT TTTCCAGAGA AGCCTTGGAA ATACTGGCCG AAAGCAGTAT CAAGCCCACA 
CTGGTAAACA ACCGATATAT AAGCCCCCTT GATAAGGAGC TGGTTATAAA AATAGCCAGA 
AACCATAAAT ACCTTATTAC TGTTGAAGAA AATGTAATAT CCGGAGGCCT GGGGAGCCGA 
ATAAACACTA TCCTTGCAGA GGCTGGGTTG GTTAATAGTA TCAAGGTTGC CAATATTGCC 
ATACCTGATA AATTTGTGGA ACACGGTAAT CAAAGCCTGC TTCGTGCCAA ATACGGATTG 
GACGGGAAAG GCATAGCCCA AAAGATATTA TCCACGGTAG ACAATCCCGG TGAAATAAAG 
CACCAGCAGA TACTTTGCCC ATAG 

 

Protein sequence

MSTGLEISIP HNLEMSKLLD TINSPSDLKK LTLDELNELA AQIREELVNR VTLNGGHLAS 
SLGVVELTIA LHRVFESPKD KIIWDVGHQS YAHKLLTGRR EQFATLRQHG GISGFTCRDE 
SPHDPFGAGH ASTSISAGLG MAVARDLAKA DYSVISVIGD GAISGGMSFE AINNAGHLHT 
KFIVILNDNG MAISPSTGAL SKFLNNVRFD PRFEFAKRGA KQTITNMPFG KAVWAFTKSI 
KHKFEKSMLP GSLWEELGFI YLGPVDGHNI RELEAALKRA KDFESQPVLI HMITQKGKGY 
DDAEADAVKY HGISPKSGGL KSGHGQSYSQ VFGQTLHKIM SDNPQVVAIT AAMTDGCGLG 
EVAADFPDRV FDVGICEQHA VTFAAGMATQ GYIPVVVIYS TFLQRSFDQI IHDVCLQKLP 
VVFAIDRGGI VGDDGKTHQG IFDLSFMSLI PDMIVAAPSD ENDLQHLLYT AVNSGKPFAI 
RYPRGFGEGV EMENGLHNIP IGQNEVLSTG SEIAILATGK SVAFSREALE ILAESSIKPT 
LVNNRYISPL DKELVIKIAR NHKYLITVEE NVISGGLGSR INTILAEAGL VNSIKVANIA 
IPDKFVEHGN QSLLRAKYGL DGKGIAQKIL STVDNPGEIK HQQILCP