Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Athe_1288 |
Symbol | |
ID | 7408869 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerocellum thermophilum DSM 6725 |
Kingdom | Bacteria |
Replicon accession | NC_012034 |
Strand | + |
Start bp | 1379737 |
End bp | 1381587 |
Gene Length | 1851 bp |
Protein Length | 616 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 643715653 |
Product | deoxyxylulose-5-phosphate synthase |
Protein accession | YP_002573161 |
Protein GI | 222529279 |
COG category | [H] Coenzyme transport and metabolism [I] Lipid transport and metabolism |
COG ID | [COG1154] Deoxyxylulose-5-phosphate synthase |
TIGRFAM ID | [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0593022 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGGTATAT TAGAAAAAGT AAACTATCCT GAAGATATAA AAAGATTGAG TATATCTGAA CTTTATGAAC TTGCTGAAGA AATAAGAGAA TTTCTGTTGT ATAACATCGC CAATACAGGT GGACACTTGG CGGCAAATTT GGGAGTTGTT GAGCTAACTC TTGCTCTGTT AAAAGTATTT GATCCACCAA AAGATAAAAT TGTGTGGGAT GTAGGACATC AATGTTATGT TTATAAGATT TTGACAGGAC GAAAGCAAAA ATTTAACACT TTAAGGAAAT TTGGTGGTTT GAGCGGTTTT CCAAAATCAA AAGAAAGCAT TTATGACTCG TTTGATACTG GACACAGTTC TACTTCTATT TCTGTTGCAT TGGGATTTGC AGTTGCACGT GATCTTAAAA ACGAAGACTA CGATGTGATT GCGGTAATAG GAGATGGAGC TTTAACTGGA GGACTTGCAT ATGAAGGGCT CAATAATGCA GGCAGATATA ATGGTAAACT TCTTGTTATT TTGAATGACA ATGACATGTC AATCTCCAAA AATGTTGGTG CGATTGCAAA ATATCTATCA AAGGTACGAA CAAAACCACG TTATTTTAAA TTGAAAAAGG CTGCTGATAG TTTGGTAGAA GGAATTCCGA TTGTTGGTAA AAACTTAAGC AAGTTTGTGA GAAAAGTAAA AGGAAGTTTA AAATATTTTT TCTTTCCTGG GACTTTGTTT GAAGCTCTTG GATTTGAATA TTATGGACCT ATTGACGGTC ATGATATAGA AAGACTTTGT GAGGTATTCA AAAGTGTTAA AGATTTTGAA AGACCTGTTT TGGTTCATGT TGTTACACAA AAAGGTAAAG GATATGAACA TGCTGAAAGA TTTCCAGAAA AATTCCATGG TGTTCCACCA TTTGACATAG AAACAGGAAA TCACTTATCT GACAATACTT CAAAGACATT TTCTGAGGTT TTAGGTGATA AGCTTTGCGA GCTTGCCAAG CGCAATCCAA AGATATTAGC AATTACCGCT GCAATGCCAG ATGGTACTGG TCTTAGCAGG TTTGCAAAGA TGTATCCTCA AAGGTTTTTT GACGTTGGAA TAGCAGAGGA ACATGCGGTC ACTTTTGCAG GTGCTCTTGC TAAAGAGGGA TTTAAACCAT TTGTGGCTAT ATATTCAACC TTCCTGCAAA GAGCTTTTGA CCAGATTATT CATGATGTGT GTCTTCAAAA TTTGAATGTG GTCTTCTGTG TAGACCGAGC AGGTCTTGTA GGCGAGGATG GAGAAACACA CCATGGAAGT TTTGATATAT CGTATTTGAG CCTAATTCCA AACTTGACAT TGATGGTGCC AAAGGATACA AAAGAATTTG AAATGATGTT GGAATTTGCA GCTTTCTACC AGGACGGCCC TATTGCAATA AGGTATCCAC GCGGGAGCTG TAAGCAAGTT GGTCTTTACG ATGAAATTAA ACTTTCTGAA CCAGAGATAT TAAAAGAAGG AGTGAATCTG GCTATATTTT CTATTGGAAG ACATGTTTCA ATGTTGTATG ATATTATTAG CAAAAACAAG TTGGATGCAA CACTGGTAAA TGTAAGATTT ATAAAACCTT TGAATACCAA GATTATAAAA AGAATAGTAA ATACACATAA AAAGATTTTA ATTGTAGAGG ACAACAGTAT TATCGGTGGA CTTGGTGAAA AAATAAAAAG TATTATAGCT GAAGAAAAAT CAGTAGAGAT TAAGCACATA GCTATACCTG ATAGATTTAT TCCTCATGGT TCAATTTTTC AGCTTTATTC TATGCTCGGG ATGGATAGAG AAAACTTAAC AAAAATTGTT ATGGAGCTGA TAGAGAGTTG A
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Protein sequence | MGILEKVNYP EDIKRLSISE LYELAEEIRE FLLYNIANTG GHLAANLGVV ELTLALLKVF DPPKDKIVWD VGHQCYVYKI LTGRKQKFNT LRKFGGLSGF PKSKESIYDS FDTGHSSTSI SVALGFAVAR DLKNEDYDVI AVIGDGALTG GLAYEGLNNA GRYNGKLLVI LNDNDMSISK NVGAIAKYLS KVRTKPRYFK LKKAADSLVE GIPIVGKNLS KFVRKVKGSL KYFFFPGTLF EALGFEYYGP IDGHDIERLC EVFKSVKDFE RPVLVHVVTQ KGKGYEHAER FPEKFHGVPP FDIETGNHLS DNTSKTFSEV LGDKLCELAK RNPKILAITA AMPDGTGLSR FAKMYPQRFF DVGIAEEHAV TFAGALAKEG FKPFVAIYST FLQRAFDQII HDVCLQNLNV VFCVDRAGLV GEDGETHHGS FDISYLSLIP NLTLMVPKDT KEFEMMLEFA AFYQDGPIAI RYPRGSCKQV GLYDEIKLSE PEILKEGVNL AIFSIGRHVS MLYDIISKNK LDATLVNVRF IKPLNTKIIK RIVNTHKKIL IVEDNSIIGG LGEKIKSIIA EEKSVEIKHI AIPDRFIPHG SIFQLYSMLG MDRENLTKIV MELIES
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