Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dvul_1718 |
Symbol | |
ID | 4663316 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris DP4 |
Kingdom | Bacteria |
Replicon accession | NC_008751 |
Strand | - |
Start bp | 2028108 |
End bp | 2030033 |
Gene Length | 1926 bp |
Protein Length | 641 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639819957 |
Product | 1-deoxy-D-xylulose-5-phosphate synthase |
Protein accession | YP_967162 |
Protein GI | 120602762 |
COG category | [H] Coenzyme transport and metabolism [I] Lipid transport and metabolism |
COG ID | [COG1154] Deoxyxylulose-5-phosphate synthase |
TIGRFAM ID | [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0789997 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.8348 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGATA GCACCATTCC AGGCCTTCTG GCGCGCATCC AGCGCCCTAC CGACGTTGCG GGCCTCTCCG CAGATGACCT GCGTACCCTC GCGGCCGACC TGCGCACCGC CATCATCGAT ACGGTTTCCA AGAACGGCGG GCATCTCGCC CCCTCACTCG GCGTTGTGGA ACTCACGCTG GCGATGCTCT CCACATTCGA CCCCGGCAAG GACAAGGTCG TCTGGGACGT GGGGCATCAG GCCTACGCAT GGAAGCTTCT CACGGGCCGG GCGGCCGATT TCCACACCCT GCGCCGCAGG CATGGCATCA GCGGCTTCCC CAAGCCGTGC GAGAGCGAGT ACGACCATTT CGGCGTGGGG CACTCCTCCA CGTCCATCTC GGCGGCACTG GGCATGGCCT TGGCGCGTGA CCTCGCCGGG GATGATCATC ATGTGGTGGC CGTCATCGGT GACGGTTCGC TCACGGCCGG GCTGGCCTTC GAGGGGCTGA ATCAGGCTGG TGACATGGGC AGGCGGCTCA TCGTCATCCT CAATGACAAC GAGATGTCCA TCTCGAGGAA CGTGGGGGCG CTCTCGCTGT TCCTCAGCCG CAACCTGTCC AAGGGGTGGG CGCGTCGCGT CAAACGCGAT GTGGAGACGG CCCTCAAGTC CATTCCCGGC ATCGGCGACG AGATGGTCGC CTACGCCAAG CGCAGCGAAC ACAGCCTGAA GAGTTTCTTC ACCCCGGGGA TGCTGTTCGA GGCGTTCCAG TTCAACTACA TCGGGCCTGT GGACGGGCAC GATGTGAAGG CGCTGGTCCG TAACCTCGAA CTGGCGAAGA CCAACGACAG GCCCGTGCTG CTGCATGTGC TCACCCGCAA GGGAAAGGGC TATACCCCGG CCGAGGCCAA CCCTGCGTTC TTCCACGGTG TGGGCCGCTT CGAACCGGAG ACGGGCAGGG CACGCAAGCC CGGCGACACC CCCGTGCTGC CCACCTATAC CGATGTGTTC GGCGAGACGC TGTGCCGTCT TGCCGACATG GATGAGCGTA TCGTTGCCAT CACGGCAGCC ATGCCGGAAG GGACGGGTAC GAACTGTTTT CGCGAGCGGC ATCCCGACAG GTTCGTGGAT GTGGGCATCT GTGAACAGCA CGCTGTCACC TTCGCCGCCG GTCTCGCCAT TCAGGGGTAT CGCCCCTTCG TCGCCATCTA TTCCACGTTC CTGCAACGTT CCTACGACCA GATAGTGCAC GACGTGTGCA TCCAGAAACT GCCCGTGGTG CTGTGCCTCG ACCGCGCCGG ACTGGTGGGC GAGGACGGGC CGACCCATCA TGGGGCCTTC GACCTGTCGT TCCTGCGCCA CATCCCGCAC ATGAGCATCA TCGCCCCGCG TGACGAGGCC GACCTTCAGG CTGCCATGTA CACGGCGCTG CATCTCGATG CCCCGCTGGC GATACGGTAT CCGCGCGGCG TGGGCTTCGG CATTCCGCTG GCGGAGTCAC CATCGCCACT GCCCGTGGGC GTCGGTGAAG TGCTCAAGGA AGGCGAAGGG GTGGCTGTCA TCGCCGTCGG CAGTCGCGTC CATCCGTCCC TCGAAGCAGC CGAAAGGCTG GCGGAGGAGA CGGGCAGACA CGCCACCGTC TTCGACGCCC GATGGGTGAA ACCCTTGCCG GAGGCGCAGC TTCTGGACAT CGTCGCCCGC CATGACGCCT TGCTCTTCGT GGAGGAGAAT GCCCTCGCCG GTGGCTTCTC GTCAGCCGTC CTCGAACTGC TGGCAGACCG GAACGCCCTT TCAGGCAAGC ATATCCGTCG CATCGGGTTG CCCGACGAAT TCGTCGAACA GGGTACGCAG AAGGAACTGC GGGTCTCTCT GGGCCTCTGT ATGGACGGCG TCGGAAAGGC CCTGAAAGAG CTTTTCGCCG CCGTGGGGAA CGCGACCGCT TCATAG
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Protein sequence | MTDSTIPGLL ARIQRPTDVA GLSADDLRTL AADLRTAIID TVSKNGGHLA PSLGVVELTL AMLSTFDPGK DKVVWDVGHQ AYAWKLLTGR AADFHTLRRR HGISGFPKPC ESEYDHFGVG HSSTSISAAL GMALARDLAG DDHHVVAVIG DGSLTAGLAF EGLNQAGDMG RRLIVILNDN EMSISRNVGA LSLFLSRNLS KGWARRVKRD VETALKSIPG IGDEMVAYAK RSEHSLKSFF TPGMLFEAFQ FNYIGPVDGH DVKALVRNLE LAKTNDRPVL LHVLTRKGKG YTPAEANPAF FHGVGRFEPE TGRARKPGDT PVLPTYTDVF GETLCRLADM DERIVAITAA MPEGTGTNCF RERHPDRFVD VGICEQHAVT FAAGLAIQGY RPFVAIYSTF LQRSYDQIVH DVCIQKLPVV LCLDRAGLVG EDGPTHHGAF DLSFLRHIPH MSIIAPRDEA DLQAAMYTAL HLDAPLAIRY PRGVGFGIPL AESPSPLPVG VGEVLKEGEG VAVIAVGSRV HPSLEAAERL AEETGRHATV FDARWVKPLP EAQLLDIVAR HDALLFVEEN ALAGGFSSAV LELLADRNAL SGKHIRRIGL PDEFVEQGTQ KELRVSLGLC MDGVGKALKE LFAAVGNATA S
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