More than 300 homologs were found in PanDaTox collection
for query gene Daud_1027 on replicon NC_010424
Organism: Candidatus Desulforudis audaxviator MP104C



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009674  Bcer98_2870  1-deoxy-D-xylulose-5-phosphate synthase  52.39 
 
 
630 aa  671    Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.016121  n/a   
 
 
-
 
NC_011899  Hore_06530  deoxyxylulose-5-phosphate synthase  55.96 
 
 
636 aa  753    Halothermothrix orenii H 168  Bacteria  hitchhiker  0.0000000000553997  n/a   
 
 
-
 
NC_002936  DET0745  1-deoxy-D-xylulose-5-phosphate synthase  52.39 
 
 
647 aa  645    Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU0686  1-deoxy-D-xylulose-5-phosphate synthase  63.18 
 
 
637 aa  776    Geobacter sulfurreducens PCA  Bacteria  normal  0.351489  n/a   
 
 
-
 
NC_002939  GSU1764  1-deoxy-D-xylulose-5-phosphate synthase  57.42 
 
 
626 aa  708    Geobacter sulfurreducens PCA  Bacteria  normal  0.0479282  n/a   
 
 
-
 
NC_010001  Cphy_2511  deoxyxylulose-5-phosphate synthase  53.76 
 
 
625 aa  664    Clostridium phytofermentans ISDg  Bacteria  normal  0.465086  n/a   
 
 
-
 
NC_013173  Dbac_0943  deoxyxylulose-5-phosphate synthase  57.44 
 
 
635 aa  704    Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_2319  1-deoxy-D-xylulose-5-phosphate synthase  56.61 
 
 
630 aa  704    Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_4249  1-deoxy-D-xylulose-5-phosphate synthase  52.23 
 
 
630 aa  665    Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.0000543695  n/a   
 
 
-
 
NC_010184  BcerKBAB4_4029  1-deoxy-D-xylulose-5-phosphate synthase  51.75 
 
 
630 aa  662    Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.000105298  n/a   
 
 
-
 
NC_005945  BAS4081  1-deoxy-D-xylulose-5-phosphate synthase  52.23 
 
 
630 aa  665    Bacillus anthracis str. Sterne  Bacteria  normal  0.491332  n/a   
 
 
-
 
NC_005957  BT9727_3919  1-deoxy-D-xylulose-5-phosphate synthase  52.23 
 
 
630 aa  665    Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.000000000317792  n/a   
 
 
-
 
NC_006274  BCZK3930  1-deoxy-D-xylulose-5-phosphate synthase  52.23 
 
 
630 aa  665    Bacillus cereus E33L  Bacteria  normal  0.0146607  n/a   
 
 
-
 
NC_013385  Adeg_1398  deoxyxylulose-5-phosphate synthase  66.89 
 
 
629 aa  815    Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_0251  1-deoxy-D-xylulose-5-phosphate synthase  54.85 
 
 
631 aa  678    Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011146  Gbem_3362  1-deoxy-D-xylulose-5-phosphate synthase  58.6 
 
 
635 aa  738    Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_013161  Cyan8802_0484  1-deoxy-D-xylulose-5-phosphate synthase  53.5 
 
 
636 aa  644    Cyanothece sp. PCC 8802  Bacteria  normal  0.0190528  normal 
 
 
-
 
NC_012918  GM21_0883  1-deoxy-D-xylulose-5-phosphate synthase  57.62 
 
 
635 aa  743    Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000000207097 
 
 
-
 
NC_012918  GM21_3025  1-deoxy-D-xylulose-5-phosphate synthase  55.73 
 
 
646 aa  686    Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011725  BCB4264_A4287  1-deoxy-D-xylulose-5-phosphate synthase  52.39 
 
 
630 aa  666    Bacillus cereus B4264  Bacteria  unclonable  0.000332787  n/a   
 
 
-
 
NC_007413  Ava_4532  1-deoxy-D-xylulose-5-phosphate synthase  53.96 
 
 
635 aa  657    Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_4569  1-deoxy-D-xylulose-5-phosphate synthase  53.16 
 
 
635 aa  642    Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_011883  Ddes_0956  1-deoxy-D-xylulose-5-phosphate synthase  53.98 
 
 
644 aa  636    Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.246357  n/a   
 
 
-
 
NC_010718  Nther_1694  1-Deoxy-D-xylulose-5-phosphate synthase  59.28 
 
 
631 aa  768    Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.134316  normal  0.0277937 
 
 
-
 
NC_007498  Pcar_1667  1-deoxy-D-xylulose-5-phosphate synthase  56.03 
 
 
634 aa  689    Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00000640226  n/a   
 
 
-
 
NC_008789  Hhal_0983  deoxyxylulose-5-phosphate synthase  54.78 
 
 
624 aa  637    Halorhodospira halophila SL1  Bacteria  normal  0.288267  n/a   
 
 
-
 
NC_011772  BCG9842_B0947  1-deoxy-D-xylulose-5-phosphate synthase  52.39 
 
 
630 aa  667    Bacillus cereus G9842  Bacteria  decreased coverage  0.0000059556  decreased coverage  0.0000085811 
 
 
-
 
NC_007517  Gmet_1934  1-deoxy-D-xylulose-5-phosphate synthase  58.48 
 
 
625 aa  704    Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_2822  1-deoxy-D-xylulose-5-phosphate synthase  60.52 
 
 
635 aa  765    Geobacter metallireducens GS-15  Bacteria  normal  0.553695  normal  0.10664 
 
 
-
 
NC_007519  Dde_2200  1-deoxy-D-xylulose-5-phosphate synthase  56.7 
 
 
661 aa  694    Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_4400  1-deoxy-D-xylulose-5-phosphate synthase  52.23 
 
 
630 aa  665    Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.0000595966  n/a   
 
 
-
 
NC_007577  PMT9312_0893  1-deoxy-D-xylulose-5-phosphate synthase  51.54 
 
 
629 aa  637    Prochlorococcus marinus str. MIT 9312  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_0430  1-deoxy-D-xylulose-5-phosphate synthase  52.78 
 
 
636 aa  656    Synechococcus elongatus PCC 7942  Bacteria  normal  0.620387  normal  0.394102 
 
 
-
 
NC_011658  BCAH187_A4307  1-deoxy-D-xylulose-5-phosphate synthase  52.23 
 
 
630 aa  665    Bacillus cereus AH187  Bacteria  unclonable  0.0000000950231  n/a   
 
 
-
 
NC_011146  Gbem_1258  1-deoxy-D-xylulose-5-phosphate synthase  54.89 
 
 
646 aa  676    Geobacter bemidjiensis Bem  Bacteria  normal  0.260207  n/a   
 
 
-
 
NC_007644  Moth_1511  1-deoxy-D-xylulose-5-phosphate synthase  64.53 
 
 
640 aa  771    Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_1852  deoxyxylulose-5-phosphate synthase  54.44 
 
 
640 aa  669    Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011661  Dtur_1044  deoxyxylulose-5-phosphate synthase  53.03 
 
 
618 aa  648    Dictyoglomus turgidum DSM 6724  Bacteria  normal  0.213907  n/a   
 
 
-
 
NC_011898  Ccel_1900  deoxyxylulose-5-phosphate synthase  54.49 
 
 
623 aa  681    Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00488607  n/a   
 
 
-
 
NC_009943  Dole_1662  deoxyxylulose-5-phosphate synthase  54.02 
 
 
626 aa  681    Desulfococcus oleovorans Hxd3  Bacteria  normal  0.184143  n/a   
 
 
-
 
NC_013552  DhcVS_652  1-deoxy-D-xylulose-5-phosphate synthase  50.32 
 
 
647 aa  650    Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_009455  DehaBAV1_0675  1-deoxy-D-xylulose-5-phosphate synthase  52.22 
 
 
633 aa  654    Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_1078  deoxyxylulose-5-phosphate synthase  65.18 
 
 
635 aa  852    Desulfotomaculum reducens MI-1  Bacteria  normal  0.0303047  n/a   
 
 
-
 
NC_011901  Tgr7_0832  1-deoxy-D-xylulose-5-phosphate synthase  53.96 
 
 
640 aa  636    Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.111285  n/a   
 
 
-
 
NC_007947  Mfla_2133  1-deoxy-D-xylulose-5-phosphate synthase  51.37 
 
 
614 aa  646    Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.000520629  normal 
 
 
-
 
NC_011726  PCC8801_0471  1-deoxy-D-xylulose-5-phosphate synthase  53.66 
 
 
636 aa  645    Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_010424  Daud_1027  deoxyxylulose-5-phosphate synthase  100 
 
 
634 aa  1288    Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_4197  1-deoxy-D-xylulose-5-phosphate synthase  52.23 
 
 
630 aa  665    Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.9666000000000002e-33 
 
 
-
 
NC_011769  DvMF_0126  1-deoxy-D-xylulose-5-phosphate synthase  54.98 
 
 
646 aa  671    Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.410155 
 
 
-
 
NC_011884  Cyan7425_4130  1-deoxy-D-xylulose-5-phosphate synthase  53.26 
 
 
632 aa  658    Cyanothece sp. PCC 7425  Bacteria  hitchhiker  0.000139923  normal 
 
 
-
 
NC_013889  TK90_0415  deoxyxylulose-5-phosphate synthase  53.82 
 
 
633 aa  637    Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_010320  Teth514_1540  1-deoxy-D-xylulose-5-phosphate synthase  56.44 
 
 
620 aa  723    Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.00810208  n/a   
 
 
-
 
NC_011830  Dhaf_3488  deoxyxylulose-5-phosphate synthase  60.03 
 
 
631 aa  759    Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.0451312  n/a   
 
 
-
 
NC_009483  Gura_1018  1-deoxy-D-xylulose-5-phosphate synthase  58.56 
 
 
637 aa  731    Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_2182  1-deoxy-D-xylulose-5-phosphate synthase  56.22 
 
 
625 aa  709    Geobacter lovleyi SZ  Bacteria  normal  0.0455646  n/a   
 
 
-
 
NC_013216  Dtox_2584  deoxyxylulose-5-phosphate synthase  67.75 
 
 
633 aa  852    Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.931562  normal  0.224926 
 
 
-
 
NC_013223  Dret_1758  deoxyxylulose-5-phosphate synthase  57.54 
 
 
633 aa  689    Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal  0.805776 
 
 
-
 
NC_008312  Tery_3042  1-deoxy-D-xylulose-5-phosphate synthase  51.02 
 
 
635 aa  642    Trichodesmium erythraeum IMS101  Bacteria  normal  hitchhiker  0.00899541 
 
 
-
 
NC_013205  Aaci_2448  deoxyxylulose-5-phosphate synthase  55.52 
 
 
631 aa  687    Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_1288  deoxyxylulose-5-phosphate synthase  50.97 
 
 
616 aa  644    Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.0593022  n/a   
 
 
-
 
NC_008346  Swol_0582  deoxyxylulose-5-phosphate synthase  57.1 
 
 
638 aa  735    Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_2235  1-deoxy-D-xylulose-5-phosphate synthase  58.83 
 
 
622 aa  757    Geobacter lovleyi SZ  Bacteria  normal  0.77755  n/a   
 
 
-
 
NC_009483  Gura_2175  1-deoxy-D-xylulose-5-phosphate synthase  57.62 
 
 
620 aa  696    Geobacter uraniireducens Rf4  Bacteria  normal  0.0116264  n/a   
 
 
-
 
NC_008554  Sfum_1418  deoxyxylulose-5-phosphate synthase  57.7 
 
 
646 aa  738    Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.793105  normal  0.333041 
 
 
-
 
NC_008609  Ppro_1191  1-deoxy-D-xylulose-5-phosphate synthase  59.57 
 
 
624 aa  721    Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_2403  1-deoxy-D-xylulose-5-phosphate synthase  56.16 
 
 
626 aa  702    Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_014248  Aazo_4395  deoxyxylulose-5-phosphate synthase  53.06 
 
 
635 aa  654    'Nostoc azollae' 0708  Bacteria  normal  0.326234  n/a   
 
 
-
 
NC_009012  Cthe_0828  1-deoxy-D-xylulose-5-phosphate synthase  56.07 
 
 
627 aa  704    Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_1718  1-deoxy-D-xylulose-5-phosphate synthase  55.43 
 
 
641 aa  662    Desulfovibrio vulgaris DP4  Bacteria  normal  0.0789997  normal  0.8348 
 
 
-
 
NC_012856  Rpic12D_2033  1-deoxy-D-xylulose-5-phosphate synthase  51.95 
 
 
636 aa  634  1e-180  Ralstonia pickettii 12D  Bacteria  normal  0.720268  normal 
 
 
-
 
NC_010682  Rpic_2426  1-deoxy-D-xylulose-5-phosphate synthase  51.79 
 
 
636 aa  630  1e-179  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_008816  A9601_09541  1-deoxy-D-xylulose-5-phosphate synthase  51.05 
 
 
629 aa  629  1e-179  Prochlorococcus marinus str. AS9601  Bacteria  normal  0.277651  n/a   
 
 
-
 
NC_007484  Noc_1743  1-deoxy-D-xylulose-5-phosphate synthase  51.51 
 
 
640 aa  629  1e-179  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_1048  1-deoxy-D-xylulose-5-phosphate synthase  53.77 
 
 
622 aa  629  1e-179  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_009091  P9301_09521  1-deoxy-D-xylulose-5-phosphate synthase  50.89 
 
 
629 aa  625  1e-178  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_1030  1-deoxy-D-xylulose-5-phosphate synthase  52.72 
 
 
621 aa  625  1e-178  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_1747  1-deoxy-D-xylulose-5-phosphate synthase  53.45 
 
 
635 aa  628  1e-178  Polaromonas sp. JS666  Bacteria  normal  normal  0.123274 
 
 
-
 
NC_007952  Bxe_B2827  1-deoxy-D-xylulose-5-phosphate synthase  52.85 
 
 
635 aa  627  1e-178  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008391  Bamb_3250  1-deoxy-D-xylulose-5-phosphate synthase  52.04 
 
 
646 aa  627  1e-178  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.0235548 
 
 
-
 
NC_010552  BamMC406_3776  1-deoxy-D-xylulose-5-phosphate synthase  52.04 
 
 
634 aa  627  1e-178  Burkholderia ambifaria MC40-6  Bacteria  normal  0.495759  normal  0.0534173 
 
 
-
 
NC_010676  Bphyt_6781  1-deoxy-D-xylulose-5-phosphate synthase  51.85 
 
 
653 aa  625  1e-178  Burkholderia phytofirmans PsJN  Bacteria  normal  0.772471  hitchhiker  0.0000939262 
 
 
-
 
NC_003295  RSc2221  1-deoxy-D-xylulose-5-phosphate synthase  52.01 
 
 
636 aa  623  1e-177  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A2631  1-deoxy-D-xylulose-5-phosphate synthase  51.51 
 
 
631 aa  623  1e-177  Methylibium petroleiphilum PM1  Bacteria  normal  0.898306  normal 
 
 
-
 
NC_007516  Syncc9605_1430  1-deoxy-D-xylulose-5-phosphate synthase  51.96 
 
 
643 aa  624  1e-177  Synechococcus sp. CC9605  Bacteria  normal  normal  0.0817623 
 
 
-
 
NC_008061  Bcen_4486  1-deoxy-D-xylulose-5-phosphate synthase  51.71 
 
 
646 aa  622  1e-177  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_1381  1-deoxy-D-xylulose-5-phosphate synthase  53.94 
 
 
628 aa  622  1e-177  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.604583  normal  0.510709 
 
 
-
 
NC_008543  Bcen2424_3879  1-deoxy-D-xylulose-5-phosphate synthase  51.71 
 
 
646 aa  622  1e-177  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.155835 
 
 
-
 
NC_010515  Bcenmc03_3648  1-deoxy-D-xylulose-5-phosphate synthase  51.71 
 
 
634 aa  621  1e-176  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B2211  1-deoxy-D-xylulose-5-phosphate synthase  51.39 
 
 
634 aa  619  1e-176  Burkholderia sp. 383  Bacteria  normal  0.41875  normal 
 
 
-
 
NC_007614  Nmul_A0236  1-deoxy-D-xylulose-5-phosphate synthase  51.8 
 
 
614 aa  621  1e-176  Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.947213  n/a   
 
 
-
 
NC_007908  Rfer_2875  1-deoxy-D-xylulose-5-phosphate synthase  52.88 
 
 
632 aa  619  1e-176  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010086  Bmul_4820  1-deoxy-D-xylulose-5-phosphate synthase  52.53 
 
 
646 aa  619  1e-176  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_007973  Rmet_2615  1-deoxy-D-xylulose-5-phosphate synthase  50.94 
 
 
637 aa  619  1e-176  Cupriavidus metallidurans CH34  Bacteria  normal  0.0207867  normal  0.922526 
 
 
-
 
NC_009832  Spro_1078  1-deoxy-D-xylulose-5-phosphate synthase  52.05 
 
 
621 aa  620  1e-176  Serratia proteamaculans 568  Bacteria  normal  hitchhiker  0.000138004 
 
 
-
 
NC_008254  Meso_0735  1-deoxy-D-xylulose-5-phosphate synthase  52.37 
 
 
650 aa  619  1e-176  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A2534  1-deoxy-D-xylulose-5-phosphate synthase  51.37 
 
 
634 aa  618  1e-176  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_3281  1-deoxy-D-xylulose-5-phosphate synthase  51.97 
 
 
621 aa  621  1e-176  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_1501  1-deoxy-D-xylulose-5-phosphate synthase  53.1 
 
 
636 aa  621  1e-176  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_2438  1-deoxy-D-xylulose-5-phosphate synthase  50.65 
 
 
643 aa  620  1e-176  Marinobacter aquaeolei VT8  Bacteria  normal  0.688474  n/a   
 
 
-
 
NC_008752  Aave_2015  1-deoxy-D-xylulose-5-phosphate synthase  51.71 
 
 
622 aa  618  1e-176  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0928222  hitchhiker  0.00382162 
 
 
-
 
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