Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aazo_4395 |
Symbol | |
ID | 9342199 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | 'Nostoc azollae' 0708 |
Kingdom | Bacteria |
Replicon accession | NC_014248 |
Strand | - |
Start bp | 4473412 |
End bp | 4475319 |
Gene Length | 1908 bp |
Protein Length | 635 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | |
Product | deoxyxylulose-5-phosphate synthase |
Protein accession | YP_003722838 |
Protein GI | 298492661 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.326234 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCATCTGA GTGAAATAAC CCATCCTAAC CAGTTACATG GTTTGTCTAT TCGGCAATTG CAACAAATTG CCCGTCAAAT CCGAGATAAG CACCTACAAA CCGTAGCAGC GACTGGAGGG CATTTGGGGC CAGGTTTGGG AGTTGTAGAA TTAACTCTAG GGCTTTACCA GACATTAGAC TTAGATCGGG ACAAAGTTAT TTGGGATGTG GGACATCAAG CTTATCCCCA CAAATTAATC ACCGGACGTT ACAGTAACTT CCACACTCTC AGACAAAAAG ACGGAGTAGC CGGTTATCTC AAACGCTGCG AAAACAAGTT TGACCACTTT GGCGCAGGAC ACGCTTCAAC CAGTATCTCA GCCGCTTTAG GCATGGCTTT AGCCCGTGAC TTAAAAGGGG AAAAATTTAA ATCCGTTGCA GTCATTGGAG ATGGCGCTTT AACTGGTGGT ATGGCGCTCG AAGCTATCAA CCATGCAGGA CACTTACCAA AAACTAACCT GCTCGTGGTT CTCAATGACA ACGAAATGTC AATTTCTCCC AACGTTGGAG CGATTCCTCG TTATCTTAAT AAAATGCGTC TGAGTCCGCC GGTGCAGTTT CTTTCAGATG GCATTGAGGA ACAGCTAAAA CATATTCCTT TCGTTGGTGA ATCTATTTCC CCAGAACTGG AACGCATTAA AGAAGGAATG AAGCGGTTAG CAGTTCCCAA AGTGGGTGCA GTTTTTGAAG AACTGGGCTT TACCTACATG GGACCAATGG ATGGGCATAA TTTAGAGGAG TTGATTGCTA CATTCCAACA GGCACATAAA ATTACTGGTC CTGTTTTAGT TCACGTAGTT ACAACTAAAG GTAAAGGGTA TGAACTAGCT GAAAAGGATC AAGTAGGCTA CCATGCTCAA AACCCATTTA ATTTAGCCAC TGGTAAAGCT ATACCTTCCA GCAAGCCCAA ACCACCTGCT TACGCAAAAG TCTTTTCTCA CACCTTAGTC AAACTAGCCG AACAGAACCC GAAAATTGTT GGTATTACGG CAGCAATGGC CACAGGTACA GGTTTAGATA AACTACAAGC CAAACTTCCA AATCAATATA TTGATGTGGG TATTGCAGAA CAACACGCTG TTACTCTCGC TGCGGGATTA GCCGCTGAAG GTATGCGTCC CGTTGCGGCT ATTTATTCCA CCTTCTTACA ACGTGCCTAC GACCAAATTA TTCATGATGT CTGCATCCAA AACCTACCTG TGTTCTTCTG TTTAGACAGG TCCGGTATAG TTGGTGCTGA TGGGCCAACT CACCAAGGTA TGTATGATAT TGCTTATATG CGATGTATTC CTAACATGGT AGTAATGGCT CCCAAGGATG AAGCTGAACT ACAACGCATG GTAGTGACAG GTATTAACCA TACCACTAGC CCCATTTCTA TGCGCTTCCC CCGTGGTAAT GGTCACGGTG TACCTTTAAT GGAAGAAGGT TGGGAACCTT TGGAAATTGG TAAAGGAGAA ATTCTCCGTC AAGGTGATGA TGTGTTAATT CTTGGCTATG GCACAATGGT TTATCCAAGT ATGCAAGCAG CAGAAATACT CAGCGAACAT GGCATTGAAG CAACAGTGAT TAATGCCCGT TTCGTTAAGC CTTTAGACAC AGAGTTGATT GTACCTTTGG CTAAACAAAT CGGCCGGGTT GTTTCTTTAG AAGAAGGCTG TTTAATGGGT GGCTTTGGTT CTGCGGTGGC TGAAGCTTTA ATGGATGCTA ATGTTTTAGT TCCAGTGAAG CGAATTGGTG TACCAGATAT TTTGGTAGAT CATGCTACTC CTGATGAATC TTTTGCAGTG TTAGGTTTGA GTAGTCGTCA AATTGTGGAA ACTGTTTTGC AGGCTTTCTT CAAAAAAGAA TTAGCTGTTG TGAAATAA
|
Protein sequence | MHLSEITHPN QLHGLSIRQL QQIARQIRDK HLQTVAATGG HLGPGLGVVE LTLGLYQTLD LDRDKVIWDV GHQAYPHKLI TGRYSNFHTL RQKDGVAGYL KRCENKFDHF GAGHASTSIS AALGMALARD LKGEKFKSVA VIGDGALTGG MALEAINHAG HLPKTNLLVV LNDNEMSISP NVGAIPRYLN KMRLSPPVQF LSDGIEEQLK HIPFVGESIS PELERIKEGM KRLAVPKVGA VFEELGFTYM GPMDGHNLEE LIATFQQAHK ITGPVLVHVV TTKGKGYELA EKDQVGYHAQ NPFNLATGKA IPSSKPKPPA YAKVFSHTLV KLAEQNPKIV GITAAMATGT GLDKLQAKLP NQYIDVGIAE QHAVTLAAGL AAEGMRPVAA IYSTFLQRAY DQIIHDVCIQ NLPVFFCLDR SGIVGADGPT HQGMYDIAYM RCIPNMVVMA PKDEAELQRM VVTGINHTTS PISMRFPRGN GHGVPLMEEG WEPLEIGKGE ILRQGDDVLI LGYGTMVYPS MQAAEILSEH GIEATVINAR FVKPLDTELI VPLAKQIGRV VSLEEGCLMG GFGSAVAEAL MDANVLVPVK RIGVPDILVD HATPDESFAV LGLSSRQIVE TVLQAFFKKE LAVVK
|
| |