| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_0849 |
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| Symbol | |
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| ID | 4285850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Maricaulis maris MCS10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008347 |
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| Strand | + |
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| Start bp | 937867 |
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| End bp | 939798 |
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| Gene Length | 1932 bp |
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| Protein Length | 643 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638140315 |
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| Product | 1-deoxy-D-xylulose-5-phosphate synthase |
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| Protein accession | YP_756080 |
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| Protein GI | 114569400 |
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| COG category | [H] Coenzyme transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1154] Deoxyxylulose-5-phosphate synthase |
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| TIGRFAM ID | [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.313067 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCATGA CGCCGAAAAC CCCGATCCTA GACACCGTCA ATTCGCCGGC AGACCTGAAA
AACCTGCCGC TCGACCGGCT CAAGTCGCTG GCCGATGAAG TGCGGGCCGA AACCATTGAC
GCTGTCTCGG TCACCGGCGG GCATCTGGGT GCCGGTCTCG GCGTGGTCGA GCTGACCACG
GCGCTCCACC ACGTCTTCGA CACCCCCACC GACACGCTGA TCTGGGATGT CGGACACCAG
TGCTATCCGC ACAAGATCCT GACCGGTCGC CGCGACCGTA TCCGCACCTT GCGCCAGCCC
GGCGGCCTGT CCGGCTTTAC CAAGCGCTCG GAAAGCGAAT ACGACCCGTT CGGTGCGGCC
CATGCCTCGA CCTCCATTTC GGCCGCGCTC GGCTTTGCCG TGGGGCGCGA CCTCAAGGAC
GAGAACCGCA ATGTGATCGC GGTCATCGGC GATGGCTCGA TGTCGGCCGG CATGGCCTAT
GAAGCGATGA ATAATGCCGG TCATATCGGT GGCCGGCTGA TTGTCATCCT CAACGACAAT
GACATGTCCA TCGCCCCGCC GGTCGGCGCG ATGAGCCATT ATTTCGCCCG CCTGGTCTCC
TCGCAGCGCT ACCGCTCCAT CCGCAAGCTC GGCAAGGGTG TCGCCAAGGC GCTTCGGGTC
GAAGAAGCGG CACGCCGGGC CGAGGAATAC ATGCGCGGAA TGGCCATGGG CGGCACGCTG
TTTGAGGAGA TGGGCTTTCG CTATGTCGGC CCGATCGACG GCCATGATCT CGACCAGCTG
GTCCCGGTCC TGCGCAATGT GCGCGATGGC GATAACGGCC CGGTCCTGAT CCATGTCGTG
ACCCAGAAGG GCAAGGGCTA TGCGCCCGCC GAGGCGTCCG ACGACAAGTA TCATGGCGTC
GCCAAATTCA ACGTCATCAC CGGCGAGCAG CAAAAGTCCA AGGCCGCCGC ACCGTCCTAC
ACCAAGGTCT TCGCCCAGCA GCTGATCCGT GAAGCCGAGG CCGACAGCCG CGTTGTCGGC
GTCACCGCGG CCATGCCGGG CGGTACCGGG CTGGACCTGT TCGGGGAACG CTTCCCGGAC
CGCATGTTTG ATGTCGGCAT TGCCGAACAG CACGCCGTCA CCTTCGCCGC CGGCCTTGCT
GCCGATGGCA TGAAGCCCTT CGCGGCGATC TATTCGACCT TCCTGCAGCG CGGCTATGAC
CAGGTCGTGC ATGATGTGGC GATCCAGAAA CTGCCCGTCC GCTTTGCCAT CGACCGGGCC
GGTCTGGTCG GTGCCGATGG TGCCACCCAT GCCGGCAGTT TCGATATCGG CTATCTTGGC
GCCTTGCCGG GCATGGTGCT GATGGCCGCT GCCGACGAGC TGGAATTGTC GCGCATGGTC
AAGACTGCCG CCCTGATCGA TGACGGCCCG TCCGCCTTCC GCTATCCGCG CGGCAATGGC
ACCGGCATTG AAATTCCCGA CCAGATCGAG CCGCTGGAGA TCGGCAAGGG CCGTATCGTC
CGCGAGGGCT CGCGCATCGC CATCCTGTCG CTCGGCACCC GCCTCGAGGA AAGCCTCAAG
GCCGCCGACG CGCTGGCCGC CCAGGGTTTC TCGACCACCG TCGCCGATGC CCGCTTCGCC
AAGCCGCTGG ACGAGGATCT CATTCTGCGC CTGGCGCGCG AGCATGAAGT CCTGATCACG
GTGGAAGAGG GCGCGGTCGG CGGTTTCGGC GCCTTCGTCC TGCACATGCT GGCCGACAAG
GGCGCCCTTG ATCGCGGCCT GCGCATCCGC ACCCTGACCC TGCCGGACGT CTTCCAGGAC
CAGGAAGCCC CGTTCGACAT GTACGAAACC GCCGGCCTCA ACGCCCGCCA CATCGCCGCC
AAGGCACTGG AAGCCATGGG CAAGGATGAT GCGGCTGCGG AACGTGTCGC GGCGGCGTTG
ATTGCGGGTT AG
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| Protein sequence | MSMTPKTPIL DTVNSPADLK NLPLDRLKSL ADEVRAETID AVSVTGGHLG AGLGVVELTT
ALHHVFDTPT DTLIWDVGHQ CYPHKILTGR RDRIRTLRQP GGLSGFTKRS ESEYDPFGAA
HASTSISAAL GFAVGRDLKD ENRNVIAVIG DGSMSAGMAY EAMNNAGHIG GRLIVILNDN
DMSIAPPVGA MSHYFARLVS SQRYRSIRKL GKGVAKALRV EEAARRAEEY MRGMAMGGTL
FEEMGFRYVG PIDGHDLDQL VPVLRNVRDG DNGPVLIHVV TQKGKGYAPA EASDDKYHGV
AKFNVITGEQ QKSKAAAPSY TKVFAQQLIR EAEADSRVVG VTAAMPGGTG LDLFGERFPD
RMFDVGIAEQ HAVTFAAGLA ADGMKPFAAI YSTFLQRGYD QVVHDVAIQK LPVRFAIDRA
GLVGADGATH AGSFDIGYLG ALPGMVLMAA ADELELSRMV KTAALIDDGP SAFRYPRGNG
TGIEIPDQIE PLEIGKGRIV REGSRIAILS LGTRLEESLK AADALAAQGF STTVADARFA
KPLDEDLILR LAREHEVLIT VEEGAVGGFG AFVLHMLADK GALDRGLRIR TLTLPDVFQD
QEAPFDMYET AGLNARHIAA KALEAMGKDD AAAERVAAAL IAG
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