Gene Teth514_1540 details

Gene Information

• Locus tag: Teth514_1540
• ID: 5876726
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermoanaerobacter sp. X514
• Kingdom: Bacteria
• Replicon accession: NC_010320
• Strand: +
• Start bp: 1562455
• End bp: 1564317
• Gene Length: 1863 bp
• Protein Length: 620 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 641541888
• Product: 1-deoxy-D-xylulose-5-phosphate synthase
• Protein accession: YP_001663163
• Protein GI: 167040178
• COG category: [H] Coenzyme transport and metabolism; [I] Lipid transport and metabolism
• COG ID: [COG1154] Deoxyxylulose-5-phosphate synthase
• TIGRFAM ID: [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.00810208
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTGGAAC AAATTGATAG CCCTTATGAC TTGAAAAAAT TAGACAAAAA GGACTTTCCG 
CTGATTTGTG AAGAAATACG CCAGTTTTTA ATAGAAAAAG TGTCTAAAAC AGGTGGGCAT 
TTAGCATCAA ACCTTGGAAT CGTTGAACTT ACAATTGCAC TTCATTATGT TTTTAATTCG 
CCAGTTGACA AAATAATCTG GGATGTAGGA CATCAGTGTT ATGTACATAA AATGCTTACA 
GGTAGGAAAG ACCAGTTTGA TACTTTGAGG AAATTCAATG GCCTTTCTGG TTATACTAAA 
AGAACGGAAA GTGTGCATGA TATATTTGGA GCAGGACACA GTAGTACCTC TATATCTGCA 
GCATTGGGCA TTGCCAAGGC AAGAGATTTA AAGGGCGAGA AATATTCTGT TGTAGCGGTA 
ATTGGGGATG GAGCTTTAAC TGGTGGCATG GCTTTTGAAG CATTAAATAA TGCAGGAAGG 
TCTAAAACAG ATTTGATTGT CGTGCTAAAT CACAATGAGA TGTCTATTTC GGAAAACGTA 
GGTAGTTTAT CTTTGTATTT AAGTAAACTT AGAACTGACC CTACTTACAA CAAATTAAAA 
CAAGAGGTTG ATAATTTACT CAATATTGTA CCTCCAATAG GAAAAAGCCT TCATAAATAC 
ATTGAAAGAA TTAAGGATTC TGTAAAACAG TTAGTAGTGT CAGGAATGTT TTTTGAAGAG 
ATGGGTTTTA CATATTTAGG ACCTATTGAC GGACATGACG TTGGTAGCCT TATAGAGGTT 
TTAGAAAGAG CGAAGAAAAT AAAAGGACCT ATTTTAGTAC ATGTTATCAC AAAAAAAGGC 
AAAGGTTACA AATTTGCAGA AAAATTTCCT GATAAATTTC ATTCTGCAGC TCCTTTTGAC 
ATACAAACAG GTAAGTTTGT AAATGAGGGG CAGGCGACTT ATTCTGATGT ATTTGGGAAG 
ACTCTTACTG AAATGGCCTT GCAAGATGAC AAAATTGTTG CAATAACTGC TGCCATGCCA 
GAGGGAACAG GGCTTATTCA TTTTGCAAAA TTGATTCCTG AAAGATTTTT TGATGTAGGA 
ATAGCAGAGC AGCATGCTAC TACCTTTGCA GCAGGAATGG CAGTACAAGG ATACAAACCT 
TATTTTGCAG TGTATTCTAC CTTTTTACAA AGAGCTTATG ACCAGCTTAT ACACGATGTA 
TGTATACAAA AATTACCTGT TGTTTTTGCA ATTGATAGAG CAGGAATTGT AGGAGAGGAT 
GGAGAAACCC ATCAAGGAGT TTTTGATTTG TCTTATTTAA GGCCAATTCC TAATATAACG 
ATTATGTCTC CAAAAGACGC AAATGAATTA GTTGAAATGG TTAAATTATC AAGAAATCTT 
GAGTTCCCTG TTGCCATAAG GTATCCAAGA GGAAAAGCAG GAGAATTCGA TATTACAAGA 
GAATGCAGTA TAGAGTTTGG AAAGGCAGAG TTAGTTACTG AAGGAAAAGA AATAGCAATT 
TTTGCATTAG GAAGAATGGT AGGAAAGGTG TTAGAAGCAA AGGAAATTTT AAAAGTTTCT 
GATTTGCAAC CCTTTATTGT CAATTTGAGA TTTGTTAAAC CTTTAGATGA AGAGCTAATT 
TTGGATATCT CAAACAAAGT CAAATTTATT GTTACAGTAG AAGACAATGT CATAGCTGGT 
GGCGTTGGAA GCGCTATATT AGAACTTTTA AATTCTAACG GAATTTATAA GCCAGTTTTG 
CGTTTGGGGT TTCCCGATAA ATTTATTGAA CACGGAGATG TGGAAAACTT GTTTAAAAAA 
TACAATTTAG ATGCTGAGTC TATCGCAAAT ACTATACTAC AAAAATATAA GGAAATGAGG 
TAA 

 

Protein sequence

MLEQIDSPYD LKKLDKKDFP LICEEIRQFL IEKVSKTGGH LASNLGIVEL TIALHYVFNS 
PVDKIIWDVG HQCYVHKMLT GRKDQFDTLR KFNGLSGYTK RTESVHDIFG AGHSSTSISA 
ALGIAKARDL KGEKYSVVAV IGDGALTGGM AFEALNNAGR SKTDLIVVLN HNEMSISENV 
GSLSLYLSKL RTDPTYNKLK QEVDNLLNIV PPIGKSLHKY IERIKDSVKQ LVVSGMFFEE 
MGFTYLGPID GHDVGSLIEV LERAKKIKGP ILVHVITKKG KGYKFAEKFP DKFHSAAPFD 
IQTGKFVNEG QATYSDVFGK TLTEMALQDD KIVAITAAMP EGTGLIHFAK LIPERFFDVG 
IAEQHATTFA AGMAVQGYKP YFAVYSTFLQ RAYDQLIHDV CIQKLPVVFA IDRAGIVGED 
GETHQGVFDL SYLRPIPNIT IMSPKDANEL VEMVKLSRNL EFPVAIRYPR GKAGEFDITR 
ECSIEFGKAE LVTEGKEIAI FALGRMVGKV LEAKEILKVS DLQPFIVNLR FVKPLDEELI 
LDISNKVKFI VTVEDNVIAG GVGSAILELL NSNGIYKPVL RLGFPDKFIE HGDVENLFKK 
YNLDAESIAN TILQKYKEMR