Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gura_1018 |
Symbol | |
ID | 5164842 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter uraniireducens Rf4 |
Kingdom | Bacteria |
Replicon accession | NC_009483 |
Strand | - |
Start bp | 1210853 |
End bp | 1212766 |
Gene Length | 1914 bp |
Protein Length | 637 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640548514 |
Product | 1-deoxy-D-xylulose-5-phosphate synthase |
Protein accession | YP_001229797 |
Protein GI | 148263091 |
COG category | [H] Coenzyme transport and metabolism [I] Lipid transport and metabolism |
COG ID | [COG1154] Deoxyxylulose-5-phosphate synthase |
TIGRFAM ID | [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTACACAC TTCTCAACAC AATAAACAGC CCGGCCGACC TGAAAAAGCT GAAGCAGGAC AAGTTGCTCA TCCTTGCCGA TGAAATCCGT GAATTTCTTC TGGAAACGGT TTCAAAGACG GGCGGCCATC TCGCTTCGAA CCTCGGCTGC GTTGAACTGA CCCTGGCGCT CCATTACTGC TTCAATTCAC CGGACGACAG CATCATCTGG GACGTGGGAC ACCAGGCCTA CACCCACAAG ATCATCACCG GGCGCCGCGA CAAATTCATC ACCCAGCGCC AGTACCATGG GATCAGCGGC TTTCCCAAGC GCTCCGAGTC CATGCACGAC GCATTCGGCG CAGGGCATTC CTCCACCTCC ATCTCCGCCG GCTTGGGAAT GGCGGTCGCC CATGGCCTGA AGGAAGAAGC GAGCAAGGTC ATCGCCGTGA TAGGCGACGG TTCGCTCACG GGCGGCATCG CCTTCGAAGC CCTGAACCAG GCCGGACATC TGCACAAGAA CCTGATCGTC GTCCTCAACG ATAATGAGAT GTCCATTTCG AAAAACGTCG GCGCCTTGTC CACCTTCATT TCCCGCAAAC TGACCGGCAG CTATTACCGC GGCCTGAAAA AAGAGATGCA GGGACTGCTG AAGAACATCC CCGCTATCGG CGGCAACATC CTCCATTTCG CCAGAAAAGC GGAAAACTCC CTGAAGGGCT TCCTTACCCC CGGCACCCTG TTCGAAGCGC TCGGTTTCGA GTATATCGGC CCGGTACAGG GGCATGATCT GCCACAACTC ATTGAAATCA TGCAAAACGT CCGCGCTCTC GAAGGTCCGG TGCTCGTACA TGTCATGACC ACCAAGGGAA AAGGCTACCA GCCGGCAGAG AAAACCCCCG ACAAGTTCCA CGGCGTCGGC CCCTTTGATG TGAAAACGGG CAAGGTGATC GCGGGCAAGC CCGGCGCTCA ATCCTATACC GGCATCTTCG GCGAAACCAT GGTCAAACTG GCCGCAGAGG ACAAGAAGAT CATCGCCATC ACCGCAGCCA TGCCCGACGG CACAGGCCTG ACACCGTTTG CCAAGGCTTA TCCCGACCGT TTTTTCGATG TGGGCATTGC CGAACAGCAC GCCCTCACCT TTGCCGCCGG AATGGCCACC GAAGGATTCC GGCCGGTGGC CGCCATTTAT TCCACCTTTG TCCAGCGCGC CTACGACCAG GTATTCCACG ACATCTGCCT GCAAAAATTG CCGGTAACAC TGGCCCTTGA CCGCGCCGGC CTGGTCGGCG ACGACGGCCC GACCCACCAC GGCGTGTTCG ACCTCTCCTA CCTGCGCCAT CTGCCGGAGA TGACCGTCAT GGCGCCGAAG GATGAAAACG AATTGCAGCA CATGCTGAAA ACCGCAATTT ACTCAGATCG TCCGATTGCC CTCCGCTATC CACGCGGCGC AGGCTACGGC GTCGCCATGG ACGAGTCACT GCAAGCAATC CCCATCGGCG TTGGCGAACA GCTGGCAGAA GGGGGTGACC TGACCCTCGT TGCCATCGGC AGCACCGTCT ATCCGGCCAT GGAGGCAGCC GAACTCCTGA AAGAAAAGGG GATACGGGCA ACGGTCATCA ATGCCCGCTT CGTCAAGCCG CTCGACCGCA ACCTGATCCT TGCTGCGGCC GGCCGCACCG GATGCATCAT CACCGTCGAA GAAAATGCCA TGCAGGGAGG CTTCGGCAGT GCCGTGCTGG AACTTCTGGC AGATGAAGCT GCCGGCATCA GGGTCAAACG GATCGGCGTT CCCGACCGAT ACATTGAGCA GGGGAGCCAG GCGCAGCTCA GACAGGACCT GCGGCTGGAT GCCGCGGGGA TCGCACAAAC CGCCGCGGAG TTTCTCGGAA AGAACGATTC ATCCCGTACC GGCCCAGGAG CCTGTCGGAC TTAG
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Protein sequence | MYTLLNTINS PADLKKLKQD KLLILADEIR EFLLETVSKT GGHLASNLGC VELTLALHYC FNSPDDSIIW DVGHQAYTHK IITGRRDKFI TQRQYHGISG FPKRSESMHD AFGAGHSSTS ISAGLGMAVA HGLKEEASKV IAVIGDGSLT GGIAFEALNQ AGHLHKNLIV VLNDNEMSIS KNVGALSTFI SRKLTGSYYR GLKKEMQGLL KNIPAIGGNI LHFARKAENS LKGFLTPGTL FEALGFEYIG PVQGHDLPQL IEIMQNVRAL EGPVLVHVMT TKGKGYQPAE KTPDKFHGVG PFDVKTGKVI AGKPGAQSYT GIFGETMVKL AAEDKKIIAI TAAMPDGTGL TPFAKAYPDR FFDVGIAEQH ALTFAAGMAT EGFRPVAAIY STFVQRAYDQ VFHDICLQKL PVTLALDRAG LVGDDGPTHH GVFDLSYLRH LPEMTVMAPK DENELQHMLK TAIYSDRPIA LRYPRGAGYG VAMDESLQAI PIGVGEQLAE GGDLTLVAIG STVYPAMEAA ELLKEKGIRA TVINARFVKP LDRNLILAAA GRTGCIITVE ENAMQGGFGS AVLELLADEA AGIRVKRIGV PDRYIEQGSQ AQLRQDLRLD AAGIAQTAAE FLGKNDSSRT GPGACRT
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