| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_0943 |
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| Symbol | |
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| ID | 8376601 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | + |
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| Start bp | 1026190 |
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| End bp | 1028097 |
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| Gene Length | 1908 bp |
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| Protein Length | 635 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 645000182 |
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| Product | deoxyxylulose-5-phosphate synthase |
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| Protein accession | YP_003157474 |
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| Protein GI | 256828746 |
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| COG category | [H] Coenzyme transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1154] Deoxyxylulose-5-phosphate synthase |
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| TIGRFAM ID | [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGAGC AAACCCTGCA GGAACTTTTT CCCATCCTGG CCGCCATCAA GAATCCCGGC
GACGTGCAGG CCATGGATGA AAAGGAACTG ACCAGGCTTG GCGAAGAGAT TCGCCGCATG
ATCATTCAGA CCGTGTCCAC CACGGGCGGG CATCTGGCCC CGTCCCTTGG CGTGGTGGAA
CTGACCATGG CGCTGCTGCG CGTCTTCAAC CCGGCCCGCG ACCGCATCGT CTGGGACGTG
GGGCATCAGG CCTATGCCTA CAAGCTGCTG ACCGGCAGGC TCGGGCGCTT CCACACCCTG
CGTCAGTTGG ACGGAATCAG CGGCTTTCCC CGCATCTGCG AGAGCCCCTT CGATCATTTC
GGCGTCGGCC ACTCCTCGAC GTCCATCTCC GCCGCCCTGG GCATGGCCGC CGCCCGCGAC
CTGGCCCATC AGGATCACAA GGTCGTGGCC GTCATCGGCG ACGGCTCCAT GACCGCCGGG
CTGGCCTACG AGGGCCTGAA CCAGGCCGGG GGGCTGGGCA AGAACATGGT CGTGGTCTTG
AACGACAACG AGATGTCCAT TTCGCGCAAT GTCGGGGCGC TGTCGTCTTT CCTCAGCCGC
AAGCTGTCCA AGCGCTGGGT GCAGCGCTTC AAGAAGGAAG CCGAATCCAT CATGCGCCAG
ATCCCGAGGA TCGGTGACGA TCTGGCCGAA TACGCCCGCC GCAGCGAGGA CTCTCTCAAA
AGTTTCTTCA CCCCCGGCAT GCTTTTCGAG GCTTTCCGCT TCACCTACAT CGGCCCCTTG
CAGGGGCACG ACATGCGCAT GCTGACCAAT GTCTTTCAGC AGACCCGTGA ACTGGAAGGC
CCCATTCTGG TCCATGTCCT GACCAAGAAG GGCAAGGGCT ACGCGCCGGC CGAAACCAAT
CCGACCTTTT TTCACGGGGT GGGCTGCTTC GAACCCGAGA CCGGGGCGGC CCGAAAGTTC
GCGGACTGTC CGCTGCCCAG CTACACCGAG GTGTTCGGTT CCACGCTGTG CAAGCTGGCC
GAAAAGGACG AGCGCGTTGT GGCCATCACC GCCGCCATGC CCGAGGGCAC CGGGGTGAGC
TGCTTCGCGG ACAGGTTTCC GGAACGCTTT TTCGATGTCG GCATCTGCGA GCAGCACGCC
GTGACCTTTG CCGCCGGGCT GGCCTCGCAG GGCATGAAGC CCGTGGTGGC CATCTATTCG
ACCTTCATGC AGCGTTCCTA CGACCAGATC GTGCACGACG TCTGCCTGCA GAACCTGAAC
GTGACCTTCT GCCTGGACCG GGGCGGCCTG GTCGGCGAGG ACGGGGCCAC GCATCACGGC
GTGTACGACC TGTCCTTTCT GCGCCATATC CCTGGGCTGG TGGTCATGGC TCCGCGCAAC
GAACCCGAGC TGCAGCACAT GCTGGCCACG GCTCTGGCCC ATGAAGGCCC GGTGGCCTTG
CGATATCCGC GCGGAGTGGG CGAGGGAGCG GCCCTGGTCG AGACGCCGGA AATTCTTCCC
CTCGGCCGGG GCGAGTTGCT GCGCGAGGGA TCGGACGGAG TCATCGTGGC GCTGGGCAGC
CGGGTCAACC CTGCCCTGGA GGCGGCGCGG ATGCTGTGCG AGGAGACAGG CAGGGAAGTG
GCCGTGTTCA ACGCCCGTTT CGTCAAGCCG TTGCCCGAGG AGCATTTGCT GGCCTTGGCC
GCCTCGCAAC CCTTTATGCT TCTGGTCGAG GAGAACGCCC TGCCCGGAGG CTTCGGTTCC
GCCGTGCTTG AGCTTCTGGC TGACCACGAC GCGCTTTCCA GCCTGCGCGT GAAGCGGCTG
GGCGTTCCGG ACCGCTTCAT TGAACACGGC AGCCAGAAGG AACTCCGGGC CCGGGTCGGC
ATCAATAGGG ACGGGATTTT GAATACGTTG CGGGCGCTGG TCCGCTGA
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| Protein sequence | MTEQTLQELF PILAAIKNPG DVQAMDEKEL TRLGEEIRRM IIQTVSTTGG HLAPSLGVVE
LTMALLRVFN PARDRIVWDV GHQAYAYKLL TGRLGRFHTL RQLDGISGFP RICESPFDHF
GVGHSSTSIS AALGMAAARD LAHQDHKVVA VIGDGSMTAG LAYEGLNQAG GLGKNMVVVL
NDNEMSISRN VGALSSFLSR KLSKRWVQRF KKEAESIMRQ IPRIGDDLAE YARRSEDSLK
SFFTPGMLFE AFRFTYIGPL QGHDMRMLTN VFQQTRELEG PILVHVLTKK GKGYAPAETN
PTFFHGVGCF EPETGAARKF ADCPLPSYTE VFGSTLCKLA EKDERVVAIT AAMPEGTGVS
CFADRFPERF FDVGICEQHA VTFAAGLASQ GMKPVVAIYS TFMQRSYDQI VHDVCLQNLN
VTFCLDRGGL VGEDGATHHG VYDLSFLRHI PGLVVMAPRN EPELQHMLAT ALAHEGPVAL
RYPRGVGEGA ALVETPEILP LGRGELLREG SDGVIVALGS RVNPALEAAR MLCEETGREV
AVFNARFVKP LPEEHLLALA ASQPFMLLVE ENALPGGFGS AVLELLADHD ALSSLRVKRL
GVPDRFIEHG SQKELRARVG INRDGILNTL RALVR
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