Gene DET0745 details

Gene Information

• Locus tag: DET0745
• Symbol: dxs
• ID: 3229946
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides ethenogenes 195
• Kingdom: Bacteria
• Replicon accession: NC_002936
• Strand: -
• Start bp: 686446
• End bp: 688389
• Gene Length: 1944 bp
• Protein Length: 647 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 637120309
• Product: 1-deoxy-D-xylulose-5-phosphate synthase
• Protein accession: YP_181480
• Protein GI: 57234479
• COG category: [H] Coenzyme transport and metabolism; [I] Lipid transport and metabolism
• COG ID: [COG1154] Deoxyxylulose-5-phosphate synthase
• TIGRFAM ID: [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGCATACGG GATTGGAAAT TTCTATTCCG CATAACTTGC AAATGTCAAA ACTGCTAGAC 
ACAATAAATA GTCCCTCAGA CCTGAAAAAG CTTACTCTGG ACGAATTAAG AGAGCTGGCT 
GTCCAAATCC GTGAAGAACT CGTTAACCGG GTGACTTTAA ACGGGGGACA TTTAGCCTCA 
AGCTTAGGCG TCGTTGAGCT TACTATTGCA TTGCATCGTG TTTTTGAAAG CCCCAAAGAT 
AAAATAATCT GGGATGTGGG GCATCAGTCT TATGCCCACA AGCTTTTGAC AGGCCGCCGT 
GAACAGTTTG CCACTCTTAG GCAGCATGGA GGATTATCCG GCTTTACCTG CCGTGATGAA 
AGCCCGCATG ACCCTTTTGG TGCAGGACAT GCCAGCACCT CCATATCAGC CGGACTGGGC 
ATGGCGGTAG CCCGTGACTT AGCCAAGGAA GATTACAGTG TTATTTCAGT AATCGGAGAC 
GGGGCTATTT CCGGCGGTAT GTCATTTGAG GCTATAAACA ATGCCGGGCA TTTGCATACC 
AAATTTATAG TCATACTCAA CGATAACGGC ATGGCTATAT CTCCCTCTAC AGGGGCTTTA 
TCCAAGTTTT TAAATAACGT CCGCTTTGAC CCGCGTTTTG AATTTGCCAA ACGGGGTGCC 
AAACAGACTA TTACCAATAT GCCTTTCGGC AAATCAGTTT GGGCTTTTAC CAAGAGCATT 
AAACGTAAAT TTGAAAAGTC TATGCTGCCC GGCAGTCTCT GGGAGGAATT GGGCTTTATT 
TACCTTGGTC CGGTAGACGG TCATAATATC CGTGAACTTG AGGCCGCACT TAAATGCGCC 
AAGGATTTTG AATCCCAGCC GGTGCTTATC CATATGATTA CCAAAAAAGG CAAAGGCTAT 
GATGATGCTG AAGCTGATGC TGTAAAATAC CACGGTATTG CACCCAAATC AGGCGGGCTT 
AAGAGCGGGC ACGGGCTTTC CTACAGCCAG GTATTCGGAC AGACATTACA TAAAATCATG 
TCTGATAACC CCAAAGTAGT AGCCATAACC GCCGCCATGA CTGACGGCTG CGGGCTGAGT 
GAAGTTGCCG CAGATTTCCC GGACAGGGTC TTTGATGTGG GTATTTGCGA ACAGCACGCC 
GTCACTTTTG CAGCCGGAAT GGCTACCCAA GGGTATATAC CGGTAGTAGT TATCTATTCT 
ACTTTCCTCC AGCGCAGTTT TGACCAGATA ATCCATGACG TCTGTCTGCA AAAACTGCCG 
GTGGTCTTCG CTATTGATAG GGGAGGGATT GTAGGAGATG ACGGGAAAAC CCATCAGGGT 
ATTTTTGACC TTTCCTTCAT GTCTCTTATA CCGGATATGA TAGTCACCGC TCCATCTGAC 
GAAAACGACC TGCAGCACCT CCTTTACACC GCTGTCAATT CCGGCAAACC TTTTGCCCTC 
CGCTATCCCA GGGGATTTGG GGAGGGGGTT GAGACAGAAG GAACTTTACG TAATATTCCA 
ATAGGGGAAA ATGAAGTTCT TGCCAGCGGC AGTGAAATAG CCATTTTTGC CACCGGCAAG 
AGTGTTGCAT TTGCCAAAGA AGCTATGGAG ATACTGGCCG AAAGCGGTAT CAAACCTACG 
CTGGTAAATA ACCGCTATAT AAGCCCGCTT GATACTGAGC TTATTTTAAA AATAGCCGGA 
AACCATAAAT ACCTTATTAC AGTTGAAGAA AACGTGCTTT CCGGGGGGCT GGGCAGCCGG 
ATAAATACTA TTCTGGCAGA GGCGGGGCTG GTTAATGCGG TCAAGATTGC CAATATCGCC 
GTACCGGATA AATTTGTAGA ACATGGCAAC CAGAGCCTGC TTCGTGCCAA ATACGGTCTG 
GACGGGAAAG GCATAGCCCA AAAGGTATTA TCCTTAATGG CTAATACCGG TGAAGCAAAA 
CACCAGCAGA TACTTTGCCC ATAG 

 

Protein sequence

MHTGLEISIP HNLQMSKLLD TINSPSDLKK LTLDELRELA VQIREELVNR VTLNGGHLAS 
SLGVVELTIA LHRVFESPKD KIIWDVGHQS YAHKLLTGRR EQFATLRQHG GLSGFTCRDE 
SPHDPFGAGH ASTSISAGLG MAVARDLAKE DYSVISVIGD GAISGGMSFE AINNAGHLHT 
KFIVILNDNG MAISPSTGAL SKFLNNVRFD PRFEFAKRGA KQTITNMPFG KSVWAFTKSI 
KRKFEKSMLP GSLWEELGFI YLGPVDGHNI RELEAALKCA KDFESQPVLI HMITKKGKGY 
DDAEADAVKY HGIAPKSGGL KSGHGLSYSQ VFGQTLHKIM SDNPKVVAIT AAMTDGCGLS 
EVAADFPDRV FDVGICEQHA VTFAAGMATQ GYIPVVVIYS TFLQRSFDQI IHDVCLQKLP 
VVFAIDRGGI VGDDGKTHQG IFDLSFMSLI PDMIVTAPSD ENDLQHLLYT AVNSGKPFAL 
RYPRGFGEGV ETEGTLRNIP IGENEVLASG SEIAIFATGK SVAFAKEAME ILAESGIKPT 
LVNNRYISPL DTELILKIAG NHKYLITVEE NVLSGGLGSR INTILAEAGL VNAVKIANIA 
VPDKFVEHGN QSLLRAKYGL DGKGIAQKVL SLMANTGEAK HQQILCP