Gene Ppro_1191 details

Gene Information

• Locus tag: Ppro_1191
• ID: 4574662
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter propionicus DSM 2379
• Kingdom: Bacteria
• Replicon accession: NC_008609
• Strand: +
• Start bp: 1242841
• End bp: 1244715
• Gene Length: 1875 bp
• Protein Length: 624 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 639755232
• Product: 1-deoxy-D-xylulose-5-phosphate synthase
• Protein accession: YP_900871
• Protein GI: 118579621
• COG category: [H] Coenzyme transport and metabolism; [I] Lipid transport and metabolism
• COG ID: [COG1154] Deoxyxylulose-5-phosphate synthase
• TIGRFAM ID: [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTATCAGT ATTTGAACCA TATAGATTCA CCCGATGATT TGAAGAAGCT GAAGCCGGAG 
CATCTGCTGG ATCTGGCGGC CGAGGTGCGC CGCTTCCTGC TGGAGAAGGT CTCTGTCACC 
GGCGGCCATC TGGGGTCCAA CCTGGGCACG GTGGAACTCT CCATCGCGCT GCTGTACTGC 
TTCGACTCGC CCAACGACAA GATCATCTGG GACGTGGGGC ACCAGGCCTA TACCCACAAG 
ATCCTCACCG GCAGGAGGGA CCGCTTCCAC ACCCAGCGCC AGTACAAGGG GCTCTCCGGT 
TTTCCCAAGC GCTCCGAGTC CGAGCATGAC GCTTTCGGGG TGGGGCACTC ATCCACCTCC 
ATCTCCGCGG CCTTGGGGAT GGCGGCGGCG GCCGATCTGG CTGGCGCGAA AAACCACGCC 
ATCGCCGTCA TCGGTGACGG ATCCCTGACC GGTGGCATGG CCTTCGAGGC GCTGAACCAG 
GCCGGCCATC TCAAGAAGGA CCTGATCGTT ATCTTGAACG ACAACGAGAT GTCCATCTCC 
AAAAACGTGG GGGCCTTTTC TTCGTTCATC TCCCGCAAGA TGACCGGCAG ATACTTCCGC 
GACCTGAAGA AGGAGATGCA GGGGCTTTTG CGCAACATTC CGGCCATCGG CTCCGACATC 
CTGCACTTTG CCCGGCGGGC CGAGAATTCG CTGAAGAGCT TCCTGACGCC GGGGTCGCTG 
TTCGAAGCGT TGGGTTTCGA CTATCTGGGG CCGCTGGATG GTCACGACCT GCCCCAGCTG 
ATCGAGGTGT TCAACAACAT CAACCAGCTG GACGGTCCGC TGCTGGTGCA TGTCATGACC 
ACCAAGGGCA AGGGGTACAA GCCGGCCGAG GAAAACCCGG ACAAGTTCCA CGGCGTGGGG 
CCCTTCGACA TCGTCACCGG CAAGGCGACG TCCTCTACCT CGGCCAGGAG CTACACGGAG 
CTGTTTGGCG AGGCCATGGT GGATCTGGCA GAGCAGGATC CCCGGGTCGT GGCCATTACC 
GCCGCCATGC GCGACGGCAC CGGGTTGAAG ACCTTCTCCG AGCGCTTTCC CAAACGCTTC 
TTCGACGTGG GGATCGCCGA ACAGCACGCC ATGACCTTCG CCGCCGGCCT GGCAGCCGAC 
GGTTTCCGTC CGGTAACCGC CATCTATTCC ACCTTCGTAC AGCGCGCCTA TGACCAGGTC 
TTTCACGACA TCTGTCTGCA GAAGCTGCCG GTGACCATCG CCATGGACCG CGCCGGCCTG 
GTGGGGGACG ACGGCCCGAC CCACCATGGA GTGATGGACT ACTCCTTTCT GCGCCACATC 
CCCGGACTGG CCCTGATGGC GCCCAAGGAC GAGAACGAGC TTCGCCACAT GCTCAAGACC 
GCCGTCACGA GCGGCGTTCC CATCTCCCTG CGCTATCCGC GCGGCGCGGG TATGGGGGTG 
GAGCTGGACA GGGATCTGAA GACCCTGGAT ATCGGCAGGG GAGAGCTTTT GATGGAGGGG 
AGCGACATCT GCCTGATTGC CATCGGCTCC ACGGTCTATC CGGCGCTCCA GGCCGCCCAT 
TCCCTGCAAG GGCTGGGGGT GCGGGTTGGG GTGGTCAATG CCCGTTTCAT CAAGCCGCTG 
GATGCCGAGT TGATCCTCTC CGTTGCCGGT TCGTGCGGCC GGATCATGAC CGTGGAGGAG 
AACCTGCTGC AGGGAGGATT CGGCAGCGCG GTCCTGGAAC TGCTCAACGA CAACAACATG 
CAGGATGTGA TCGTCAGGCG CCTCGGCATA CCCGACCGTT TCGTGGAGCA TGGCTCCCAG 
GCGCGGCTGC GCCAGGATCT GGGCATCGAT GCCGAGGGGA TCGCCGCGGC TGCCCTGGCG 
TTTCTCAAAC AGTAG 

 

Protein sequence

MYQYLNHIDS PDDLKKLKPE HLLDLAAEVR RFLLEKVSVT GGHLGSNLGT VELSIALLYC 
FDSPNDKIIW DVGHQAYTHK ILTGRRDRFH TQRQYKGLSG FPKRSESEHD AFGVGHSSTS 
ISAALGMAAA ADLAGAKNHA IAVIGDGSLT GGMAFEALNQ AGHLKKDLIV ILNDNEMSIS 
KNVGAFSSFI SRKMTGRYFR DLKKEMQGLL RNIPAIGSDI LHFARRAENS LKSFLTPGSL 
FEALGFDYLG PLDGHDLPQL IEVFNNINQL DGPLLVHVMT TKGKGYKPAE ENPDKFHGVG 
PFDIVTGKAT SSTSARSYTE LFGEAMVDLA EQDPRVVAIT AAMRDGTGLK TFSERFPKRF 
FDVGIAEQHA MTFAAGLAAD GFRPVTAIYS TFVQRAYDQV FHDICLQKLP VTIAMDRAGL 
VGDDGPTHHG VMDYSFLRHI PGLALMAPKD ENELRHMLKT AVTSGVPISL RYPRGAGMGV 
ELDRDLKTLD IGRGELLMEG SDICLIAIGS TVYPALQAAH SLQGLGVRVG VVNARFIKPL 
DAELILSVAG SCGRIMTVEE NLLQGGFGSA VLELLNDNNM QDVIVRRLGI PDRFVEHGSQ 
ARLRQDLGID AEGIAAAALA FLKQ