| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_3189 |
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| Symbol | |
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| ID | 0 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli DH1 |
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| Kingdom | Bacteria |
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| Replicon accession | CP001637 |
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| Strand | + |
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| Start bp | 3430778 |
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| End bp | 3432640 |
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| Gene Length | 1863 bp |
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| Protein Length | 620 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | deoxyxylulose-5-phosphate synthase |
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| Protein accession | ACX40815 |
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| Protein GI | 260450393 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTTTG ATATTGCCAA ATACCCGACC CTGGCACTGG TCGACTCCAC CCAGGAGTTA
CGACTGTTGC CGAAAGAGAG TTTACCGAAA CTCTGCGACG AACTGCGCCG CTATTTACTC
GACAGCGTGA GCCGTTCCAG CGGGCACTTC GCCTCCGGGC TGGGCACGGT CGAACTGACC
GTGGCGCTGC ACTATGTCTA CAACACCCCG TTTGACCAAT TGATTTGGGA TGTGGGGCAT
CAGGCTTATC CGCATAAAAT TTTGACCGGA CGCCGCGACA AAATCGGCAC CATCCGTCAG
AAAGGCGGTC TGCACCCGTT CCCGTGGCGC GGCGAAAGCG AATATGACGT ATTAAGCGTC
GGGCATTCAT CAACCTCCAT CAGTGCCGGA ATTGGTATTG CGGTTGCTGC CGAAAAAGAA
GGCAAAAATC GCCGCACCGT CTGTGTCATT GGCGATGGCG CGATTACCGC AGGCATGGCG
TTTGAAGCGA TGAATCACGC GGGCGATATC CGTCCTGATA TGCTGGTGAT TCTCAACGAC
AATGAAATGT CGATTTCCGA AAATGTCGGC GCGCTCAACA ACCATCTGGC ACAGCTGCTT
TCCGGTAAGC TTTACTCTTC ACTGCGCGAA GGCGGGAAAA AAGTTTTCTC TGGCGTGCCG
CCAATTAAAG AGCTGCTCAA ACGCACCGAA GAACATATTA AAGGCATGGT AGTGCCTGGC
ACGTTGTTTG AAGAGCTGGG CTTTAACTAC ATCGGCCCGG TGGACGGTCA CGATGTGCTG
GGGCTTATCA CCACGCTAAA GAACATGCGC GACCTGAAAG GCCCGCAGTT CCTGCATATC
ATGACCAAAA AAGGTCGTGG TTATGAACCG GCAGAAAAAG ACCCGATCAC TTTCCACGCC
GTGCCTAAAT TTGATCCCTC CAGCGGTTGT TTGCCGAAAA GTAGCGGCGG TTTGCCGAGC
TATTCAAAAA TCTTTGGCGA CTGGTTGTGC GAAACGGCAG CGAAAGACAA CAAGCTGATG
GCGATTACTC CGGCGATGCG TGAAGGTTCC GGCATGGTCG AGTTTTCACG TAAATTCCCG
GATCGCTACT TCGACGTGGC AATTGCCGAG CAACACGCGG TGACCTTTGC TGCGGGTCTG
GCGATTGGTG GGTACAAACC CATTGTCGCG ATTTACTCCA CTTTCCTGCA ACGCGCCTAT
GATCAGGTGC TGCATGACGT GGCGATTCAA AAGCTTCCGG TCCTGTTCGC CATCGACCGC
GCGGGCATTG TTGGTGCTGA CGGTCAAACC CATCAGGGTG CTTTTGATCT CTCTTACCTG
CGCTGCATAC CGGAAATGGT CATTATGACC CCGAGCGATG AAAACGAATG TCGCCAGATG
CTCTATACCG GCTATCACTA TAACGATGGC CCGTCAGCGG TGCGCTACCC GCGTGGCAAC
GCGGTCGGCG TGGAACTGAC GCCGCTGGAA AAACTACCAA TTGGCAAAGG CATTGTGAAG
CGTCGTGGCG AGAAACTGGC GATCCTTAAC TTTGGTACGC TGATGCCAGA AGCGGCGAAA
GTCGCCGAAT CGCTGAACGC CACGCTGGTC GATATGCGTT TTGTGAAACC GCTTGATGAA
GCGTTAATTC TGGAAATGGC CGCCAGCCAT GAAGCGCTGG TCACCGTAGA AGAAAACGCC
ATTATGGGCG GCGCAGGCAG CGGCGTGAAC GAAGTGCTGA TGGCCCATCG TAAACCAGTA
CCCGTGCTGA ACATTGGCCT GCCGGACTTC TTTATTCCGC AAGGAACTCA GGAAGAAATG
CGCGCCGAAC TCGGCCTCGA TGCCGCTGGT ATGGAAGCCA AAATCAAGGC CTGGCTGGCA
TAA
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| Protein sequence | MSFDIAKYPT LALVDSTQEL RLLPKESLPK LCDELRRYLL DSVSRSSGHF ASGLGTVELT
VALHYVYNTP FDQLIWDVGH QAYPHKILTG RRDKIGTIRQ KGGLHPFPWR GESEYDVLSV
GHSSTSISAG IGIAVAAEKE GKNRRTVCVI GDGAITAGMA FEAMNHAGDI RPDMLVILND
NEMSISENVG ALNNHLAQLL SGKLYSSLRE GGKKVFSGVP PIKELLKRTE EHIKGMVVPG
TLFEELGFNY IGPVDGHDVL GLITTLKNMR DLKGPQFLHI MTKKGRGYEP AEKDPITFHA
VPKFDPSSGC LPKSSGGLPS YSKIFGDWLC ETAAKDNKLM AITPAMREGS GMVEFSRKFP
DRYFDVAIAE QHAVTFAAGL AIGGYKPIVA IYSTFLQRAY DQVLHDVAIQ KLPVLFAIDR
AGIVGADGQT HQGAFDLSYL RCIPEMVIMT PSDENECRQM LYTGYHYNDG PSAVRYPRGN
AVGVELTPLE KLPIGKGIVK RRGEKLAILN FGTLMPEAAK VAESLNATLV DMRFVKPLDE
ALILEMAASH EALVTVEENA IMGGAGSGVN EVLMAHRKPV PVLNIGLPDF FIPQGTQEEM
RAELGLDAAG MEAKIKAWLA
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