| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_0547 |
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| Symbol | |
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| ID | 5379681 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ochrobactrum anthropi ATCC 49188 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009667 |
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| Strand | + |
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| Start bp | 574613 |
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| End bp | 576529 |
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| Gene Length | 1917 bp |
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| Protein Length | 638 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640833200 |
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| Product | 1-deoxy-D-xylulose-5-phosphate synthase |
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| Protein accession | YP_001369107 |
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| Protein GI | 153007892 |
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| COG category | [H] Coenzyme transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1154] Deoxyxylulose-5-phosphate synthase |
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| TIGRFAM ID | [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCCGAC CCACGACCCC ATTGCTTGAC AAGGCGCCGA TCCCGGAAGC CCTGCGCGCA
TTGCCGGAAT CTGATCTGCC GCAGCTCGCG CAGGAATTGC GTGCAGAGCT GATCGACGTG
GTTTCAACCA CCGGCGGGCA TCTGGGAGCG GGACTGGGAG TGGTGGAGCT GACAGTGGCA
TTGCACCATG TCTTCGACAC ACCGCACGAC CGTATCATCT GGGACGTTGG TCATCAGGCT
TATCCGCACA AGATTTTGAC CGGGCGCCGC GACCGTATCC GCACATTGCG CCAGACCGGC
GGTCTTTCGG GTTTCACCAA GCGTACTGAA AGTGAATATG ATCCTTTCGG TGCTGCACAT
TCATCGACAT CGATTTCCGC TGGCCTCGGC ATGGCGGTCG CATCCGATCT TTCGGGCGAA
AAGCGCAATG TTATTGCCGT CATTGGCGAT GGCTCCATGT CGGCAGGCAT GGCCTATGAG
GCGATGAATA ATGCTGGTGC GCTCGACGCG CGCCTCATTG TCATCCTCAA CGATAATGAT
ATGTCGATTG CGCCGCCGAC CGGTGCGATG AGCGCCTATC TGGCGCGTCT TGTCTCCGGC
AAGACCTATC GCAGCGTTCG CGAGGCCGCC AAGCAGGTCG CCAAGAAACT GCCGAAGTTT
TTGCAGGACA AGGCCCGCAA ATCAGAAGAA TATGCGCGTG CCTTCTTTAC AGGCGGCACC
CTGTTCGAGG AACTTGGTTT TTACTATGTC GGTCCTATCG ACGGCCATAA TCTGGATCAT
CTGCTGCCGA TCCTGAAAAA CGTACGCGAT ACGCAGGAAG GCCCGGTGCT CATTCATGTG
GTGACACAGA AGGGCAAGGG CTATGCGCCT GCAGAAGCTG CCGCCGATAA ATATCACGGC
GTCAACAAGT TCGACGTCAT CACCGGCAAG CAGTCGAAGC CGCCTGCAAA TGCACCGAGC
TACACCAAGA TTTTCGGCAC GAGCCTGATC GAAGAAGCCC GTCACGACGA CAGAATAGTG
GCAATCACCG CCGCCATGCC ATCGGGCACC GGGCTTGATC TTTTTGGCGA AGTGTTTCCT
CAGCGCACAT TCGATGTCGG TATTGCCGAG CAACATGCGG TAACCTTCGC CGCCGGTCTG
GCCAGCGAGG GCTATAAGCC CTTCTGCGCG ATCTATTCCA CCTTCCTGCA GCGTGGTTAC
GACCAGGTCG TGCATGACGT GTCGATCCAG AATCTGCCGG TGCGCTTCCC CATTGATCGC
GCCGGACTGG TTGGTGCCGA TGGCCCGACC CATGCAGGCT CCTTCGATAC GGGCTTTCTC
GCAGCTCTTC CCGGTTTTGT AGTGATGGCT GCATCGGATG AAGCCGAACT GCGCCATATG
GTGCGCACGG CTGCCGAATA TGATGAAGGC CCGATCTCTT TCCGCTATCC GCGTGGCGAC
GGTGTAGGTG TTGACCTGCC AGAGCGTGGA CAACTGCTCG AAATCGGCAA GGGCCGCATC
GTGCGCGAGG GCACGAAGGT TGCTCTGCTG TCCTTCGGAA CGCGCTTGCA GGAATGTCTT
GCCGCCGCCG ATGAACTGGG TGCTGCCGGT CTTTCCACCA CAGTTGCCGA TGCGCGCTTT
GCCAAGCCAC TCGACCACGA TCTGATCCGT CGTCTGGCAC GCGAGCATGA AGTGCTGGTT
ATGGTGGAAG AGGGCGCTGT CGGTGGCTTT GCTTCCCACG TGCTGCAATT CCTTGCGACT
GACGGCCTTC TTGATCGTGG CCTCAAGGTG CGGGCTTTGA CCTTGCCGGA TACTTATCAG
GACCACGGCA AGCCGGATGC GATGTATGCC GAGGCCGGCC TTGACCGGAC AGGCATCGTG
CATGCGGTGT TTGCAGCTCT TGGCCGCGAG GCCGTTGCAG CGCCGTTTAG CGCCTGA
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| Protein sequence | MSRPTTPLLD KAPIPEALRA LPESDLPQLA QELRAELIDV VSTTGGHLGA GLGVVELTVA
LHHVFDTPHD RIIWDVGHQA YPHKILTGRR DRIRTLRQTG GLSGFTKRTE SEYDPFGAAH
SSTSISAGLG MAVASDLSGE KRNVIAVIGD GSMSAGMAYE AMNNAGALDA RLIVILNDND
MSIAPPTGAM SAYLARLVSG KTYRSVREAA KQVAKKLPKF LQDKARKSEE YARAFFTGGT
LFEELGFYYV GPIDGHNLDH LLPILKNVRD TQEGPVLIHV VTQKGKGYAP AEAAADKYHG
VNKFDVITGK QSKPPANAPS YTKIFGTSLI EEARHDDRIV AITAAMPSGT GLDLFGEVFP
QRTFDVGIAE QHAVTFAAGL ASEGYKPFCA IYSTFLQRGY DQVVHDVSIQ NLPVRFPIDR
AGLVGADGPT HAGSFDTGFL AALPGFVVMA ASDEAELRHM VRTAAEYDEG PISFRYPRGD
GVGVDLPERG QLLEIGKGRI VREGTKVALL SFGTRLQECL AAADELGAAG LSTTVADARF
AKPLDHDLIR RLAREHEVLV MVEEGAVGGF ASHVLQFLAT DGLLDRGLKV RALTLPDTYQ
DHGKPDAMYA EAGLDRTGIV HAVFAALGRE AVAAPFSA
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