| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_0671 |
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| Symbol | |
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| ID | 4569825 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides DSM 266 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008639 |
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| Strand | - |
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| Start bp | 764861 |
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| End bp | 766792 |
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| Gene Length | 1932 bp |
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| Protein Length | 643 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639765269 |
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| Product | 1-deoxy-D-xylulose-5-phosphate synthase |
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| Protein accession | YP_911150 |
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| Protein GI | 119356506 |
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| COG category | [H] Coenzyme transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1154] Deoxyxylulose-5-phosphate synthase |
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| TIGRFAM ID | [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGACT CTATTCCCGT TCCTGTATCG CAAGAGAGCT CAATACTTGC ATCCATTCAC
AGTCCAGAAG ACCTGAAAAA GCTCTCTCTG GAAGATCTTC AGCACGTTGC CGATGAGTGC
CGTCGTGAAG TGATCAACCT TGTTGCACAA AATGGCGGTC ATTTCGCATC AAGTCTCGGC
GTTGTGGAAC TAAGCGTAGC CTTACATTAC GTCTACAATT CGCCACGAGA CAAAATAGTC
TGGGATGTCG GCCATCAGGC CTATATCCAT AAAATTCTGA CCGGAAGAAG AGAGAGCATG
AAAACCAACC GGCAATACGG GGGACTGGCC GGATTTCCAA GAATTTTTGA AAGTCCCTAC
GACGCTTTCG GTACCGGACA TGCATCCACA TCTATCTCAG CAGCCGCAGG CATGGCTGCC
GCACGAGACC TTTCCGGAGG AACCGAAAAA ATGATCGCGG TGATAGGTGA CGGCAGCATG
ACCGGCGGGA TGGCATTTGA GGCCATGAAC CATCTGGGCG ACACCAAAAG CGATGTTCTG
GTCATTCTGA ACGACAACCA GATGGCCATT TCGCCAAGTA CAGGCGGACT GAAAACCCAT
CTTGTCAACA TCGCTCTGAA CAAGACTTAT AACAAAACCC GAAAGTTTAT CTGGAACTCC
ATCTCTCTTT TAAACAATGA TCTCGGCGAT ACAGCAAAAA GCCTTGTAAG AAAACTGGAA
GACGGCATTA AAGCCGCTTT CACACCCGGA GCATTCTTTG AAGCGCTCGG TCTGCGATAT
TTCGGACCTA TTGACGGGCA CAATCTTGAA CAGCTTGTCA AGGCACTCAA GGAGATGCAG
GAGCTTCCCC ACCCGAAACT CCTGCATGTC GTCACGACAA AAGGAAAAGG CTTCAAGCCT
GCCGAAGAAA ACCAGAGCAA ATGGCATGCC CACAACGGCG GTTTCGATAC AACGACCGGC
AAGACAATTG TTACCGCCCA AAAAGCCGGG CCGCCAAAAT ATCAGGAGGT TTTTGGCGAA
ACCCTTGTTG AGCTTGCCCT GAAAGATCCG CGCATCACAG CCATCACTGC TGCCATGCCG
AGCGGAACAT CCCTTGACCT GTTTCAGAAC GCTCTGCCGA ACCGGTTCTT TGATGTCGGC
ATTGCCGAAC AACATGCCGT AACTTTTGCG GCTGGACTTG CCATTCAGGG CTTCAAGCCT
GTCTGCGCCA TTTATTCCAC CTTTCTGCAA CGCGGATACG ACCAGATCAT CCACGATGTT
GCCCAGCAGA ACCTTCATGT CGTCTTTGCC ATTGACCGTG CCGGTCTGGT AGGAGAGGAC
GGCCCGACGC ATCACGGAGC TTTTGACCTC TCCTTCCTGC AGCCCATTCC CAACTTCGTC
ATTATGGCGC CTTCGGATGA GCAGGAACTT CGCAACATGC TCTATACCGC TCTCTACCAT
GTTACCGGAC CTGTCGCCAT TCGCTACCCA AGAGGAAACG GCACCGGCAT TGCCCTGAAC
AAAACCCTGA TTCCGCTTGA AATCGGGAAA GGCAGAATTA TCCGGCAGGG AAACGGGATC
GCACTGCTTG CAGCCGGGCC CCTTGTGTGG AGAGCCCTTG AAGTGGCCGA AGCGCTGCAA
AAGGAGGGAA TGAATCCTCT GGTGGCTGAC ATGCGCTTTA TTAAACCTCT CGATACGGAA
CTGATTGAAG AAATTGCCCA ACAGGTAACG CATCTGGTCG TCATTGAAGA AAACAGCATG
ATCGGCGGAC TGGGAAGCGG AGTCATCGAT TATATCAATA GCAGAAAGAG TAAAATTCCG
GTACTGAAAA CAGGACTTCC TGACGCCTTC GTCACCCACG GATCAATGGA GGAACTTTAC
AGAGAAACCG GACTTGATGT TGTGGGAATA ACAAAAAGCA TAAAGGATTT CTATCCCGGA
AACGTTACAT GA
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| Protein sequence | MEDSIPVPVS QESSILASIH SPEDLKKLSL EDLQHVADEC RREVINLVAQ NGGHFASSLG
VVELSVALHY VYNSPRDKIV WDVGHQAYIH KILTGRRESM KTNRQYGGLA GFPRIFESPY
DAFGTGHAST SISAAAGMAA ARDLSGGTEK MIAVIGDGSM TGGMAFEAMN HLGDTKSDVL
VILNDNQMAI SPSTGGLKTH LVNIALNKTY NKTRKFIWNS ISLLNNDLGD TAKSLVRKLE
DGIKAAFTPG AFFEALGLRY FGPIDGHNLE QLVKALKEMQ ELPHPKLLHV VTTKGKGFKP
AEENQSKWHA HNGGFDTTTG KTIVTAQKAG PPKYQEVFGE TLVELALKDP RITAITAAMP
SGTSLDLFQN ALPNRFFDVG IAEQHAVTFA AGLAIQGFKP VCAIYSTFLQ RGYDQIIHDV
AQQNLHVVFA IDRAGLVGED GPTHHGAFDL SFLQPIPNFV IMAPSDEQEL RNMLYTALYH
VTGPVAIRYP RGNGTGIALN KTLIPLEIGK GRIIRQGNGI ALLAAGPLVW RALEVAEALQ
KEGMNPLVAD MRFIKPLDTE LIEEIAQQVT HLVVIEENSM IGGLGSGVID YINSRKSKIP
VLKTGLPDAF VTHGSMEELY RETGLDVVGI TKSIKDFYPG NVT
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