| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9211_08521 |
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| Symbol | dxs |
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| ID | 5731322 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9211 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009976 |
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| Strand | + |
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| Start bp | 746136 |
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| End bp | 748067 |
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| Gene Length | 1932 bp |
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| Protein Length | 643 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641285216 |
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| Product | 1-deoxy-D-xylulose-5-phosphate synthase |
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| Protein accession | YP_001550737 |
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| Protein GI | 159903393 |
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| COG category | [H] Coenzyme transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1154] Deoxyxylulose-5-phosphate synthase |
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| TIGRFAM ID | [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.68369 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.000952628 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGTCTGA GTGAGCTTAG TCATCCTAAT CAATTGCATG GCTTGACAAT TGCTCAGCTT
GAAGATATTG CTTGTCAGAT TCGTGAAAGA CATCTTCAGG TTGTATCAAC CAGTGGAGGC
CACTTAGGGC CTGGTCTTGG TGTGGTTGAG TTGACTATTG CTTTATATCA AACCCTAGAT
CTCGATGTAG ATAAAGTTGT ATGGGATGTA GGACACCAGG CTTATCCTCA CAAGTTAATT
ACCGGTCGTT ATGAGAATTT CAACACTCTT AGACAAAAAG GAGGTGTTGC TGGCTATTTA
AAGCGTTCAG AAAGCACTTT CGATCATTTT GGCGCTGGAC ATGCAAGTAC ATCTATTTCA
GCAGCCTTAG GAATGGCATT TGCCAGAGAT CGTCTTGGTC TAAATCACAA ATGTGTAGCT
GTGATTGGAG ATGGAGCTCT GACTGGAGGT ATGGCTTTAG AAGCGATTAA TCATGCAGGA
CACCTTCCTA ACACTCCCTT TTTAGTTGTT CTAAATGATA ATGATATGTC TATATCCCCT
CCTGTTGGCG CACTTTCTAC ATATTTGAAT CGTATGAGAC ATAGTGCCCC AGTTCAGTTC
ATATCAGATA GCGTCCAAGA GAGTGTAAAA AACCTTCCAT TTATCGGAGG AGAAATTCCA
CCTGAAATTA AATCTCTAAC GGGCAGTGTT AAGAGGTTAG CTGTACCAAA AGTAGGTGCT
GTTTTTGAGG AACTTGGCTT TACTTATATG GGACCTATTG ATGGTCATGA TATTTCAAGA
ATGATCCGTA CTTTCCAAGC TGCACATCGT GTCGGAGGGC CTGTCTTAGT CCATGTAGCT
ACAACCAAAG GGAAAGGTTA TCCCTATGCA GAAGCTGATC AAGTTGGATA TCATGCACAA
TCTGCTTTTG ATTTAACAAC TGGTAAATCA ATTCCATCAA AGTCTCCTAA ACCCCCAAGT
TATAGCAAGG TATTTGGCCA AACTTTAGTA AAGATCTGCG AGCAAAATAA TAAAGTTATA
GGAATTACTG CAGCTATGGC TACTGGAACA GGCCTTGACT TATTACAGAA GGCTATTCCA
AATCAATATG TTGATGTTGG CATCGCAGAG CAACATGCTG TAACTCTTGC GGCTGGAATG
GCATGTGATG GACTTCGACC AGTTGTTGCC ATCTATAGCA CCTTTCTACA AAGAGCTTAT
GATCAGTTGA TTCATGATGT TGGAATTCAA AAACTACCCG TTACTTTTGT TCTTGACCGG
GCAGGAATCG TTGGAGCAGA TGGTCCCACC CACCAAGGTC AATATGACAT TAGCTATTTA
AGGTCTGTCC CTAATTTCAC TGTTATGGCT CCCAAGGACG AGGCTGAGCT TCAAAGGATG
TTGGTTACAT GCTTAGAAAA TGACGGACCA TGTGCCTTAC GTATTCCGCG CGGATCTGGT
GAAGGGGTTA CGTTAATGGA AGAAGGATGG GAACCATTAA AGATTGGAAG AGGGGAAATT
CTTGAAGATG GAGATGATCT ATTGATTTTG GCTTATGGAT CAATGGTTAC ACCTGCCGTC
CAAACTGCTG AACTGTTAAA GCAAGCTGGG ATCTCTTCCA CAGTTGTAAA TGCTCGGTTC
CTAAGACCCC TAGATCAGGC TTTAATTCAT CCATTAGCAA GAAGAATTGG CAAGGTTGTC
ACTATCGAAG AAGGGGCTCT AGGAGGTGGT TTTGGTTCAG CTGTTGTTGA GTCTTTTTCA
GATCAAGATT TACTAGTACC AACTTTTAGG CTTGGTATTC CAGACAAGCT TGTTGATCAC
GCAAGCCCCC AACAAAGTAA GGAATCATTG GGTTTAACAC CATCTCAAAT GAGTAAGTCG
ATTATGAAGA GATATGGATG GGACACTTCC GATAGCCTAT TTCTAAGCAA TTCCAACACA
AGCTCTGCTT AA
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| Protein sequence | MRLSELSHPN QLHGLTIAQL EDIACQIRER HLQVVSTSGG HLGPGLGVVE LTIALYQTLD
LDVDKVVWDV GHQAYPHKLI TGRYENFNTL RQKGGVAGYL KRSESTFDHF GAGHASTSIS
AALGMAFARD RLGLNHKCVA VIGDGALTGG MALEAINHAG HLPNTPFLVV LNDNDMSISP
PVGALSTYLN RMRHSAPVQF ISDSVQESVK NLPFIGGEIP PEIKSLTGSV KRLAVPKVGA
VFEELGFTYM GPIDGHDISR MIRTFQAAHR VGGPVLVHVA TTKGKGYPYA EADQVGYHAQ
SAFDLTTGKS IPSKSPKPPS YSKVFGQTLV KICEQNNKVI GITAAMATGT GLDLLQKAIP
NQYVDVGIAE QHAVTLAAGM ACDGLRPVVA IYSTFLQRAY DQLIHDVGIQ KLPVTFVLDR
AGIVGADGPT HQGQYDISYL RSVPNFTVMA PKDEAELQRM LVTCLENDGP CALRIPRGSG
EGVTLMEEGW EPLKIGRGEI LEDGDDLLIL AYGSMVTPAV QTAELLKQAG ISSTVVNARF
LRPLDQALIH PLARRIGKVV TIEEGALGGG FGSAVVESFS DQDLLVPTFR LGIPDKLVDH
ASPQQSKESL GLTPSQMSKS IMKRYGWDTS DSLFLSNSNT SSA
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