Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9301_09521 |
Symbol | dxs |
ID | 4911752 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9301 |
Kingdom | Bacteria |
Replicon accession | NC_009091 |
Strand | + |
Start bp | 820286 |
End bp | 822175 |
Gene Length | 1890 bp |
Protein Length | 629 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640160535 |
Product | 1-deoxy-D-xylulose-5-phosphate synthase |
Protein accession | YP_001091176 |
Protein GI | 126696290 |
COG category | [H] Coenzyme transport and metabolism [I] Lipid transport and metabolism |
COG ID | [COG1154] Deoxyxylulose-5-phosphate synthase |
TIGRFAM ID | [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTTTAA GTGAGTTAAG TCATCCAAAT CAACTTCATG GCTTAACAGT TTCACAATTA GAAGAAATTG CTTGTCAAAT TAGAGAAAGA CACCTTCAGG TAGTGTCTAC TAGTGGAGGA CATCTTGGTC CTGGATTAGG TGTAGTTGAG TTGACCTTGG CTTTATATCA AACTCTTGAT CTTGATTTTG ACAAAGTTGT TTGGGATGTA GGACATCAAG GCTACCCTCA TAAATTAATT ACAGGACGTT TCAGTCAATT TGATTCTCTA AGGCAACAAA ATGGAGTCGC TGGATATCTA AAAAGAAGTG AAAGTAAATT TGATCATTTT GGTGCTGGAC ATGCAAGTAC TTCTATTTCA GCTGCTTTAG GAATGGCAAT AGCAAGAGAT AGAAAAGGTG ATAATTATAA ATGTGTCGCT GTTATTGGAG ATGGAGCACT AACTGGAGGA ATGGCATTAG AAGCTATAAA TCATGCAGGT CACTTACCAA ATACCCCTTT AGTAGTTGTA TTGAACGATA ATGATATGTC TATTTCACCT CCGGTTGGAG CCCTTTCATC TTACTTAAAT AAGGTAAGAG TAAGTCCACC ATTACAATTT TTGTCCGATA GTGTTCAAGA AAGTGTAAAA AATATTCCCC TAATTGGTAA AGATATCCCA GAAGAGCTCA AAAATATTAA AGGAAGCGTT AGACGACTAT CTGTGCCAAA GGTTGGAGCT GTTTTTGAAG AACTTGGATT TACATATATG GGTCCAATTG ATGGTCATGA TATTGGTAAC TTAGTTAAGA CCTTTAACGC TGCCCATAAA CTTAAGAGAC CTGTACTTGT TCATGTTGTT ACAACAAAAG GGAAGGGTTA CCCATATGCA GAAGCCGATC AGGTTGGATA TCATGCACAG TCTGCATTTG ATCTTACAAC TGGGAAATCT ATTCCATCAA AGAAACCTAA ACCTGTTAGT TATAGTAAAA TATTTGGTCA AACCTTATTA AAAATATGTG AGCAAGATAG CAAAGTCGTT GGTATTACTG CTGCAATGGC TACGGGTACT GGTTTAGATA TTTTGCAAAA AAATATTCCT GATCAATATA TCGATGTAGG AATAGCAGAA CAACATGCAG TTACTCTTGC GGCAGGAATG TCTTGCGATG GTCTTAAACC TGTTGTAGCT ATTTATAGTA CTTTTCTTCA ACGTGCTTTC GACCAATTAA TTCATGATGT AGGGATACAA AATTTACCTG TATCATTCGT ACTTGATAGA GCTGGTATAG TTGGAGCTGA CGGTCCTACT CACCAAGGTC AGTACGACAT CAGTTATATG AGATCTATAC CTAATTTTGT ATTGATGGCT CCAAAGGATG AGTCTGAATT ACAGAGAATG TTAATAACTT CAATAAACCA TAATGGTCCT ACAGCTCTAA GAATACCCAG AGGCTCTGGA TTAGGAGTGG CTATAATGGA TGAGGGTTGG GAACCTTTGA ATATAGGCGA AGCTGAAATA ATTGAAGGAG GAGAAGATAT TTTAATTATT GCTTATGGTT CAATGGTTGC ATCAGCAATC GAAACTGCAA AGATCTTAAA AAATATGAAC ATTAATGCAT GCATTGTTAA TGCAAGATTT GTTAAACCTC TCGATAAAAA TCTTATTATG CCTTTAGCAA GTAGGATTCA AAAAGTTGTA ACAATGGAAG AAGGAACCTT AATAGGTGGA TTTGGTTCCG CAATAGTAGA ATTATTTAAC GATAATGAAA TAAACATTCC AGTATACAGA ATAGGTATAC CTGATGTTTT AGTTGATCAT GCTTCACCTG ATCAGAGTAA AGAAAAACTA GGACTTATGC CTGATCAGAT GGCAGATAAC ATTGTTAAGA AATTTAAGTT AGTTAATTAA
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Protein sequence | MLLSELSHPN QLHGLTVSQL EEIACQIRER HLQVVSTSGG HLGPGLGVVE LTLALYQTLD LDFDKVVWDV GHQGYPHKLI TGRFSQFDSL RQQNGVAGYL KRSESKFDHF GAGHASTSIS AALGMAIARD RKGDNYKCVA VIGDGALTGG MALEAINHAG HLPNTPLVVV LNDNDMSISP PVGALSSYLN KVRVSPPLQF LSDSVQESVK NIPLIGKDIP EELKNIKGSV RRLSVPKVGA VFEELGFTYM GPIDGHDIGN LVKTFNAAHK LKRPVLVHVV TTKGKGYPYA EADQVGYHAQ SAFDLTTGKS IPSKKPKPVS YSKIFGQTLL KICEQDSKVV GITAAMATGT GLDILQKNIP DQYIDVGIAE QHAVTLAAGM SCDGLKPVVA IYSTFLQRAF DQLIHDVGIQ NLPVSFVLDR AGIVGADGPT HQGQYDISYM RSIPNFVLMA PKDESELQRM LITSINHNGP TALRIPRGSG LGVAIMDEGW EPLNIGEAEI IEGGEDILII AYGSMVASAI ETAKILKNMN INACIVNARF VKPLDKNLIM PLASRIQKVV TMEEGTLIGG FGSAIVELFN DNEINIPVYR IGIPDVLVDH ASPDQSKEKL GLMPDQMADN IVKKFKLVN
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