| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9515_09901 |
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| Symbol | dxs |
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| ID | 4719138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9515 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008817 |
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| Strand | - |
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| Start bp | 883800 |
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| End bp | 885695 |
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| Gene Length | 1896 bp |
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| Protein Length | 631 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640080670 |
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| Product | 1-deoxy-D-xylulose-5-phosphate synthase |
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| Protein accession | YP_001011304 |
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| Protein GI | 123966223 |
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| COG category | [H] Coenzyme transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1154] Deoxyxylulose-5-phosphate synthase |
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| TIGRFAM ID | [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTTTAA GTGAGTTAAG CCATCCAAAT CAATTACATG GCTTAACGGT ATCACAATTA
GAAGAAATTG CCTGTCAGAT AAGAGAAAGA CATTTGCAGG TAGTTTCAAC AAGTGGAGGT
CATTTAGGTC CTGGACTAGG CGTAGTTGAA TTAACACTTG CTTTATATCA AACATTAGAT
CTTGATTTCG ACAAAGTTGT TTGGGATGTT GGTCATCAAG CTTATCCACA TAAATTAGTT
ACTGGACGTT TTAATGAATT CGATTCTTTA CGTCAACAAA AAGGCATAGC AGGTTATCTA
AAACGCTCTG AAAGTATTTT CGACCATTTT GGAGCAGGTC ATGCAAGTAC CTCTATTTCA
GCAGCTTTGG GAATGGCAAT TGCAAGAGAT GCTAAAGGTG AAAATCATAA ATGCGTTGCT
GTTATAGGAG ATGGAGCACT AACAGGTGGA ATGGCTTTAG AAGCTATAAA TCATGCAGGG
ACCTTACCAG AGACTCCTTT TTTAGTAATA CTTAACGATA ATGACATGTC TATCTCTCCA
CCTGTTGGAG CCCTTTCTAC CTATCTAAAT AAAGTTAGAT TAAGTCCTCC TTTACAATTT
TTATCAAATA GTGTTCAAGA AAGTGTTAAA AATATTCCGC TTATAGGCAA GGATCTACCT
GAAGAATTAA AAACTATAAA AGGAAGCGTG AGAAGATTAG CTGTTCCTAA AGTTGGTGCA
GTTTTTGAAG AACTTGGTTT TACATATATG GGTCCAATTC AAGGTCATGA TATTTCTAAT
CTTATTAATA CTTTTAATGC TGCTCATAGA CTTAAAAAAC CTGTACTTGT TCACGTGGTT
ACAACTAAAG GAAAGGGATA TCCATACGCT GAAGCGGATC AAGTAGGTTA TCATGCTCAG
TCATCCTTCA ATTTAACAAC TGGAAAATCT ATCCCATCAA GTAAACCTAA ACCAGTTAGT
TATAGTAAAA TATTTGGCCA AACTCTTTTG AAAATTTGTG AACAAGACAG TAAAGTAATT
GGTATCACAG CTGCTATGGC TACAGGAACA GGCCTTGATT TGTTACAGAA GAATATTCCT
GAACAATATA TAGATGTTGG TATAGCAGAA CAACATGCTG TTACTCTTGC TGCAGGCATG
TCATGCGATG GTCTAAAACC TGTAGTTGCT ATTTACAGCA CCTTCCTACA ACGTGCTTTT
GATCAATTAA TTCATGATGT TGGTATTCAA AATTTGCCAG TCTCTTTTGT TCTTGACCGG
GCGGGTATCG TAGGTGCTGA TGGTCCTACA CACCAAGGTC AGTACGATAT TAGCTATATG
AGATCAATTC CAAATTTTGT CTTGATGGCA CCAAAGGATG AAGCCGAATT GCAGAGAATG
TTAATTACTT CAATTAATCA TAAAGGTCCT ACTGCATTAC GTATCCCTAG AGGTTCAGGG
CGTGGTGTTG CAGTTATGGA TGAAGGATGG GAACCTTTAA ATATTGGTGA AGGCGAAATA
TTAGAAGATG GGGAGGATAT TCTTATAGTT GCTTATGGAT CTATGGTTTC CTCAGCTATT
GAAACATCAA AATTATTAAA AGATAAAAAT ATATCACCTT GTGTCATTAA TGCTAGGTTT
GTAAGACCTC TTGATAAAGA CTTAATACTA CCTTTAGCAA ATAAAATTAA AAAAGTTGTA
ACTATGGAAG AGGGTACTTT GATTGGAGGA TTTGGCTCTG CAATCGTTGA ATTATTAAAT
GATAATGATA TTAACATTCC TGTTTTTAGA ATTGGAATAC CAGATGTATT AGTTGACCAT
GCTTCACCTG ATCAAAGCAA AACACAATTA GGTCTTATGC CCAATCAGAT GTCTGAGAAT
ATTATTAATA GATTCAATTT AATAAAAAAT TTCTAA
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| Protein sequence | MLLSELSHPN QLHGLTVSQL EEIACQIRER HLQVVSTSGG HLGPGLGVVE LTLALYQTLD
LDFDKVVWDV GHQAYPHKLV TGRFNEFDSL RQQKGIAGYL KRSESIFDHF GAGHASTSIS
AALGMAIARD AKGENHKCVA VIGDGALTGG MALEAINHAG TLPETPFLVI LNDNDMSISP
PVGALSTYLN KVRLSPPLQF LSNSVQESVK NIPLIGKDLP EELKTIKGSV RRLAVPKVGA
VFEELGFTYM GPIQGHDISN LINTFNAAHR LKKPVLVHVV TTKGKGYPYA EADQVGYHAQ
SSFNLTTGKS IPSSKPKPVS YSKIFGQTLL KICEQDSKVI GITAAMATGT GLDLLQKNIP
EQYIDVGIAE QHAVTLAAGM SCDGLKPVVA IYSTFLQRAF DQLIHDVGIQ NLPVSFVLDR
AGIVGADGPT HQGQYDISYM RSIPNFVLMA PKDEAELQRM LITSINHKGP TALRIPRGSG
RGVAVMDEGW EPLNIGEGEI LEDGEDILIV AYGSMVSSAI ETSKLLKDKN ISPCVINARF
VRPLDKDLIL PLANKIKKVV TMEEGTLIGG FGSAIVELLN DNDINIPVFR IGIPDVLVDH
ASPDQSKTQL GLMPNQMSEN IINRFNLIKN F
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