| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMN2A_0300 |
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| Symbol | |
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| ID | 3605672 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL2A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007335 |
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| Strand | + |
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| Start bp | 838824 |
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| End bp | 840710 |
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| Gene Length | 1887 bp |
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| Protein Length | 628 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637687158 |
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| Product | 1-deoxy-D-xylulose-5-phosphate synthase |
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| Protein accession | YP_291495 |
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| Protein GI | 72382140 |
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| COG category | [H] Coenzyme transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1154] Deoxyxylulose-5-phosphate synthase |
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| TIGRFAM ID | [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.533137 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTCTGA GCCAGTTAAG TCATCCAAAT GAGCTTCATG GCTTAGCCAT TAGTGAATTG
GAAGATGTTG CTTGCCAAAT TAGAGAAAGG CATCTTCAAG TAGTTTCTAC TAGTGGTGGG
CACTTAGGTC CAGGTCTTGG TGTTGTTGAG TTAACAATTG CTCTCTATCA GACTTTAGAT
CTAGATGTAG ATAAAGTTAT TTGGGATGTT GGACATCAAG CTTATCCTCA CAAGTTACTT
ACGGGAAGAT ATAACCGATT TGATTCTCTC AGACAGCAAA AAGGCGTAGC TGGTTATCTA
AAAAGAACAG AAAGTAAATT TGATCATTTT GGAGCTGGAC ATGCGAGCAC ATCAATTTCT
GCCGCTCTTG GTATGGCTAT TGCTAGAGAC CGAAAAGGGG AAGATTATAA ATGTGTTGCA
GTAATTGGAG ATGGTGCTCT TACCGGTGGA ATGGCTTTAG AGGCTATTAA TCATGCAGGA
CATCTTCCAA AAACACCTCT TTTGGTTGTC CTAAATGATA ATGATATGTC GATTTCTCCT
CCTGTTGGAG CATTATCGAC TTATTTAAAT CGTATGCGTC ATAGCCCGCC TGTTCAATTC
ATATCTGATA GTGTCCAAGA AAGTGTGAAA AATCTTCCTT TCATGGGAGA TGCTATACAA
GAGGAATTTA AATCTCTTAC TGGCAGCGTT AGACGTTTAG CAGTTCCAAG TGTTGGTGCA
GTTTTTGAGG AATTGGGTTT TACTTATATG GGTCCTGTAG ATGGGCATGA TATTGCCGAA
TTGACTAGAA CATTTAATGC TGCGCATAAA GTTGGTGGAC CTGTAATGGT CCATGTCGCT
ACTACAAAAG GAAAAGGTTA TCCATATGCT GAAGCTGATC AGGTTGGTTA CCATGCTCAG
TCTTCCTTTG ATCTAACAAC AGGAAAATCT ATTCCTTCTA AAACTCCTAA ACCTCCAAGT
TTTAGCAAGG TATTTGGTCA AACTTTAGTA AAGCTTTGCG AGCAAGACAG CAAAATTGTA
GGTATTACTG CTGCAATGGC AGAAGGTACA GCTTTAAATC TTTTACAGAA AGCTATTCCT
GATCAATATG TTGATGTTGG TATAGCAGAA CAACATGCTG TAACTCTTGC TGGTGGTATG
GCTTGCGAAG GCATCAAACC AGTTGTTGCC ATTTACAGTA CTTTTTTACA ACGTGCATAT
GATCAGTTGA TCCATGATAT TGGAATACAG AATTTACCTG TAACTTTCGT ATTAGATAGA
GCTGGAATTG TTGGTGCTGA TGGCCCAACT CATCAAGGGC AATATGACAT TAGCTATTTA
AGGTGTATTC CAAACTTTAC TGTTATGGCT CCAAAAGATG AGTCTGAATT GCAGCAAATG
TTGGTGACCT GTATTAATCA CAATGGTCCA TCAGCTCTAA GGATACCTAG AGGTTCTGGA
GAAGGTGCAG CTTTGATGGA GGAAGGATGG GAATCTCTGG AAATTGGTAA AGCTGAGACT
TTAGAAGAGG GCGAAAACTT ATTAATTATT GGTTATGGCT CTATGGTTTT CCCAGCAATT
AGAACAGCAG CAATACTTAA AGAATTTGGA GTCAATAGTA CTGTTATTAA CGCTCGCTTC
ATAAGACCAT TAGATGAGGA TACTATTCAT GAGGCAGCAA AAAGAATTGG CAAAGTAGTA
ACAATGGAAG AAGGAACACT ATTGGGCGGC TTTGGATCTG CTGTTGTTGA ATCTTTTAAT
GATAATGATA TTTTTGTCCC TACATTAAGA ATTGGAATAC CAGACAAATT AGTTGATCAT
GCAACGCCAC AACAAAGCAA AGAATCGCTT GGCTTGACAC CAGAAATGAT GGCTGATCAA
ATTAGAAATA AATTTAATTT TAATTAA
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| Protein sequence | MRLSQLSHPN ELHGLAISEL EDVACQIRER HLQVVSTSGG HLGPGLGVVE LTIALYQTLD
LDVDKVIWDV GHQAYPHKLL TGRYNRFDSL RQQKGVAGYL KRTESKFDHF GAGHASTSIS
AALGMAIARD RKGEDYKCVA VIGDGALTGG MALEAINHAG HLPKTPLLVV LNDNDMSISP
PVGALSTYLN RMRHSPPVQF ISDSVQESVK NLPFMGDAIQ EEFKSLTGSV RRLAVPSVGA
VFEELGFTYM GPVDGHDIAE LTRTFNAAHK VGGPVMVHVA TTKGKGYPYA EADQVGYHAQ
SSFDLTTGKS IPSKTPKPPS FSKVFGQTLV KLCEQDSKIV GITAAMAEGT ALNLLQKAIP
DQYVDVGIAE QHAVTLAGGM ACEGIKPVVA IYSTFLQRAY DQLIHDIGIQ NLPVTFVLDR
AGIVGADGPT HQGQYDISYL RCIPNFTVMA PKDESELQQM LVTCINHNGP SALRIPRGSG
EGAALMEEGW ESLEIGKAET LEEGENLLII GYGSMVFPAI RTAAILKEFG VNSTVINARF
IRPLDEDTIH EAAKRIGKVV TMEEGTLLGG FGSAVVESFN DNDIFVPTLR IGIPDKLVDH
ATPQQSKESL GLTPEMMADQ IRNKFNFN
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