| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_4309 |
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| Symbol | |
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| ID | 5831110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | + |
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| Start bp | 4792006 |
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| End bp | 4793982 |
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| Gene Length | 1977 bp |
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| Protein Length | 658 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641370100 |
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| Product | 1-deoxy-D-xylulose-5-phosphate synthase |
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| Protein accession | YP_001641749 |
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| Protein GI | 163853706 |
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| COG category | [H] Coenzyme transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1154] Deoxyxylulose-5-phosphate synthase |
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| TIGRFAM ID | [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCACTAG CGGACACGAC GATCCTTGAG GGTCTTGAGA CGCCGGATCG TCTCCGGCTT
CTGCCGGAGA GCGAGCTGCG GCGAGTCGCC GACGCGGTGC GCGCCGAGAT GATCGACGCC
GTGTCGATCA CCGGCGGCCA TCTCGGCTCC GGCCTCGGCG TGGTCGAACT CACGGTGGCG
CTCCACCACG TCTTCGACAC TCCCGACGAC CGCATCGTCT GGGATGTCGG ACACCAGTGC
TACCCGCACA AGATCCTCAC AGGCCGGCGC GACCGCATCC GCACGCTGCG CCAGGGTGGC
GGGCTGTCCG GCTTCACCAA GCGGTCGGAG AGCGAGTACG ACCCGTTCGG CGCGGCCCAC
TCCTCCACCT CGATCTCCGC CGCGCTCGGC ATGGCCGTGG CACGCGACCT CGAGGAGGCG
GACGCCAAGG CCAAGGGCGG CCCGGCGCCC AAACGCCGCA ACATGATCGC GGTGATCGGC
GACGGCTCGA TGTCGGCGGG CATGGCCTAC GAGGCCATGA ACAATGCCGG CGCCCTGCAC
TCGCGCCTGA TCGTCATCCT CAACGACAAC GACATGTCGA TCGCGCCCCC CGTCGGCGCG
ATGTCGGCCT ACCTCGCCCG TCTCGCCTCC GGCGGCACCT ACCGTTCGCT CCGCGAGACC
GCCAAGCAGC TCGGCAAGCT GCTGCCCAAA GCGCTCTACC AGCGCGCCGC GGCCGCGGAA
GAGTATGCCC GCTCGCTGAT CGTCGGCGGC GGCACGATGT TCGAGGAGAT GGGCTTCCAC
TATGTCGGCC CGGTCGATGG GCACAACCTC GACCACCTGC TCCCCGTTCT GAAGAACGTG
CGCGACTCGG ATCAGGGCCC GATCCTGCTC CACGTCGTCA CGCAGAAGGG CAAGGGTTAT
GCGCCGGCGG AGGCATCCGC CGATCGCTAC CACGGCGTGG TCAAGTTCGA CGTGGTTTCG
GGCGTGCAGG CCAAGGCCAA GGCCAACGCC CCGGCCTATA CCCGCGTGTT CGGCGAGAGC
CTGATCAAGG CGGCCGATGC CGATCCGAAG GTGGTGGCGA TCACCGCGGC GATGCCCGGC
GGCACCGGGA TCGACCTGTT CGGCAAGGCG CATCCCGACC GGACCTTCGA CGTCGGCATC
GCCGAGCAGC ACGCGGTGAC CTTTGCCGGC GGCTTGGCCA CCGAGGGTTA CAAGCCGTTC
GTGGCGATCT ACTCGACCTT CCTGCAGCGC GCCTACGATC AGGTCGTGCA TGACGTCGCG
CTGCAAAACT TAGCCGTGCG GTTCTGCCTC GACCGGGCGG GGCTGGTGGG CGCGGATGGC
GCCACGCATG CGGGCGCGTT CGATCTGGCC TATCTCTGCT GCCTGCCGAA CATGACGGTG
ATGGCGGCGG CCGACGAGGC CGAGCTGGTG CACATGGTGG CGACCTGCCA CGCGCACGAT
TCGGGCCCGA TCGCGCTGCG CTACCCGCGC GGCGAGGGGG TCGGCATCGA GCTGCCGGAG
ACGGGCGTGC CGCTGGCGAT CGGCCGCGGC CGCGTGGTGC GGCGTCCGGA GGGGGCGCGG
GTGGCGCTGC TCTCGCTCGG CACGCGGCTG TCGGAGGCGC TGAAGGCGGC CGACGCGCTG
GAGGCGGAGG GTGTGGCGGC CACGGTGGCG GATGCGCGCT TTGCCAAGCC GCTGGATGCC
GAGCTGATCG TGGATCTGGC GATGAGCCAC GAGGTTCTGG TGACGGTGGA GGAAGGCTCG
GTCGGCGGCT TCGGGGCGAT GGTGCTGCAC CTGCTGGCCG AGCGCGGCGT GCTCGATACC
GGCCGGGTCC GGGTCCGCAC GCTGACGCTG CCGGACTTGT ACCAGGACCA CGACAAGCCG
GAGAAGATGT ACGCCGAGGC CGGGCTCGAT GCCGAGGGCA TCCTCAAGGT CGTCCGCGCC
GCGCTGCCGG AGAAGGCGGC GCAGCGCGAA GGCAGCGTGG TGAGCCTGAA GCGGTAG
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| Protein sequence | MALADTTILE GLETPDRLRL LPESELRRVA DAVRAEMIDA VSITGGHLGS GLGVVELTVA
LHHVFDTPDD RIVWDVGHQC YPHKILTGRR DRIRTLRQGG GLSGFTKRSE SEYDPFGAAH
SSTSISAALG MAVARDLEEA DAKAKGGPAP KRRNMIAVIG DGSMSAGMAY EAMNNAGALH
SRLIVILNDN DMSIAPPVGA MSAYLARLAS GGTYRSLRET AKQLGKLLPK ALYQRAAAAE
EYARSLIVGG GTMFEEMGFH YVGPVDGHNL DHLLPVLKNV RDSDQGPILL HVVTQKGKGY
APAEASADRY HGVVKFDVVS GVQAKAKANA PAYTRVFGES LIKAADADPK VVAITAAMPG
GTGIDLFGKA HPDRTFDVGI AEQHAVTFAG GLATEGYKPF VAIYSTFLQR AYDQVVHDVA
LQNLAVRFCL DRAGLVGADG ATHAGAFDLA YLCCLPNMTV MAAADEAELV HMVATCHAHD
SGPIALRYPR GEGVGIELPE TGVPLAIGRG RVVRRPEGAR VALLSLGTRL SEALKAADAL
EAEGVAATVA DARFAKPLDA ELIVDLAMSH EVLVTVEEGS VGGFGAMVLH LLAERGVLDT
GRVRVRTLTL PDLYQDHDKP EKMYAEAGLD AEGILKVVRA ALPEKAAQRE GSVVSLKR
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