| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_4678 |
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| Symbol | |
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| ID | 7115246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium chloromethanicum CM4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011757 |
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| Strand | + |
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| Start bp | 4957286 |
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| End bp | 4959262 |
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| Gene Length | 1977 bp |
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| Protein Length | 658 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643527376 |
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| Product | 1-deoxy-D-xylulose-5-phosphate synthase |
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| Protein accession | YP_002423380 |
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| Protein GI | 218532564 |
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| COG category | [H] Coenzyme transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1154] Deoxyxylulose-5-phosphate synthase |
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| TIGRFAM ID | [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.942989 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.352645 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCACTAG CGGACACGAC GATCCTTGAG GGTCTTGAGA CGCCGGATCG TCTCCGGCTT
CTGCCGGAGA GCGAGCTGCG GCGAGTCGCC GACGCCGTGC GCGCCGAGAT GATCGACGCC
GTGTCGATCA CCGGCGGCCA TCTCGGCTCG GGCCTGGGCG TGGTCGAACT CACGGTGGCG
CTCCACCATG TCTTCGACAC CCCCGACGAC CGCATCGTCT GGGACGTCGG ACACCAGTGC
TACCCGCACA AGATCCTCAC AGGCCGCCGC GACCGCATCC GCACGCTGCG CCAGGGCGGT
GGTCTGTCCG GCTTCACCAA GCGCTCGGAG AGCGAGTACG ACCCCTTCGG CGCGGCCCAC
TCCTCCACCT CGATCTCCGC CGCGCTCGGC ATGGCCGTGG CGCGCGACCT CGAGGAGGCG
GACGCCAAGG CCAAGGGCGG CCCGGCGCCG AAGCGCCGCA ACATGATCGC GGTGATCGGC
GACGGCTCGA TGTCGGCCGG CATGGCCTAT GAGGCCATGA ACAATGCCGG CGCGCTGCAC
TCGCGCCTCA TCGTCATCCT CAACGACAAC GACATGTCGA TCGCGCCCCC CGTCGGCGCG
ATGTCGGCCT ACCTCGCCCG GCTCGCTTCC GGCGGCACCT ATCGCTCACT GCGCGAGACC
GCCAAGCAGC TCGGCAAGCT GCTGCCCAAA GCGCTCTACC AGCGCGCGGC GGCCGCGGAA
GAGTATGCCC GCTCGCTGAT CGTCGGCGGC GGCACGATGT TCGAGGAGAT GGGCTTCCAC
TATGTGGGAC CGGTCGATGG GCACAACCTC GACCACCTGC TCCCCGTTCT GAAGAACGTG
CGCGATTCGG ACCAGGGCCC GATCCTGCTC CATGTCGTCA CGCAGAAGGG CAAGGGTTAT
GCGCCGGCGG AAGCCAGCGC CGACCGCTAC CACGGCGTGG TCAAGTTCGA CGTGGTCTCG
GGCGTGCAGG CCAAGGCCAA GGCGAACGCC CCGGCCTATA CCCGCGTGTT CGGCGAGAGC
CTGATCAAGG CGGCCGACGC CGATCCCAAG GTGGTGGCGA TCACCGCGGC GATGCCCGGC
GGCACCGGCA TCGACCTGTT CGGCAAGGCG CATCCCGACC GGACCTTCGA CGTCGGCATC
GCCGAGCAGC ACGCGGTGAC CTTTGCCGGC GGTCTGGCGA CCGAGGGCTA CAAGCCGTTC
GTGGCGATCT ACTCGACCTT CCTGCAGCGG GCCTACGATC AGGTCGTGCA TGACGTCGCG
CTGCAGAACT TAGCCGTGCG GTTCTGCCTC GACCGGGCGG GGCTGGTGGG CGCGGATGGC
GCCACGCATG CGGGCGCGTT CGATCTGGCC TATCTCTGCT GCCTGCCGAA CATGACGGTG
ATGGCGGCGG CCGACGAGGC GGAACTGGTG CACATGGTGG CGACCTGCCA CGCGCACGAT
TCGGGCCCGA TCGCGCTGCG CTACCCGCGC GGCGAGGGGG TCGGCATCGA GTTGCCGGAG
ACGGGCGTGC CGCTGGCGAT CGGCCGCGGC CGCGTGGTGC GGCGTCCGGA AGGGGCGCGG
GTGGCGCTGC TCTCGCTCGG CACGCGGTTG TCGGAGGCGC TGAAGGCGGC CGACGCGCTG
GAGGCCGAGG GTGTCGCAGC GACGGTCGCG GATGCGCGCT TTGCCAAGCC GCTCGACGCC
GAGCTGATCG TCGATCTGGC GATGAGCCAC GAGGTTCTGG TGACGGTCGA GGAGGGCTCG
GTCGGCGGCT TTGGGGCGAT GGTGCTGCAC CTGCTGGCCG AGCGCGGCGT GCTCGATACC
GGCCGGGTCC GGGTTCGCAC GCTGACGCTG CCGGACAGCT ACCAGGACCA CGACAAGCCG
GAGAAGATGT ACGCCGAGGC CGGGCTCGAT GCCGAGGGCA TCCTCAAGGT CGTCCGCGCC
GCGCTGCCGG AGAAGGCGGC GCAGCGCGAA GGCAGCGTGG TGAGCCTGAA GCGGTAG
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| Protein sequence | MALADTTILE GLETPDRLRL LPESELRRVA DAVRAEMIDA VSITGGHLGS GLGVVELTVA
LHHVFDTPDD RIVWDVGHQC YPHKILTGRR DRIRTLRQGG GLSGFTKRSE SEYDPFGAAH
SSTSISAALG MAVARDLEEA DAKAKGGPAP KRRNMIAVIG DGSMSAGMAY EAMNNAGALH
SRLIVILNDN DMSIAPPVGA MSAYLARLAS GGTYRSLRET AKQLGKLLPK ALYQRAAAAE
EYARSLIVGG GTMFEEMGFH YVGPVDGHNL DHLLPVLKNV RDSDQGPILL HVVTQKGKGY
APAEASADRY HGVVKFDVVS GVQAKAKANA PAYTRVFGES LIKAADADPK VVAITAAMPG
GTGIDLFGKA HPDRTFDVGI AEQHAVTFAG GLATEGYKPF VAIYSTFLQR AYDQVVHDVA
LQNLAVRFCL DRAGLVGADG ATHAGAFDLA YLCCLPNMTV MAAADEAELV HMVATCHAHD
SGPIALRYPR GEGVGIELPE TGVPLAIGRG RVVRRPEGAR VALLSLGTRL SEALKAADAL
EAEGVAATVA DARFAKPLDA ELIVDLAMSH EVLVTVEEGS VGGFGAMVLH LLAERGVLDT
GRVRVRTLTL PDSYQDHDKP EKMYAEAGLD AEGILKVVRA ALPEKAAQRE GSVVSLKR
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