| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_6391 |
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| Symbol | |
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| ID | 6130292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium sp. 4-46 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010511 |
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| Strand | - |
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| Start bp | 7021753 |
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| End bp | 7023744 |
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| Gene Length | 1992 bp |
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| Protein Length | 663 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641646485 |
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| Product | 1-deoxy-D-xylulose-5-phosphate synthase |
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| Protein accession | YP_001773089 |
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| Protein GI | 170744434 |
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| COG category | [H] Coenzyme transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1154] Deoxyxylulose-5-phosphate synthase |
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| TIGRFAM ID | [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.144066 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCACCGC TCAGCCTTCC CCTCCTCGAT CGCGTCCGTG ATCCGTCGGA GCTTCGCGCC
CTGCCGGAGA GCGACCTGGC GCAGCTCGCC GCGGAACTGC GCGCCGAGAC CATCGACGCG
GTCTCGGTCA CCGGCGGCCA TCTCGGCGCG GGGCTGGGCG TGGTCGAACT CACGGTCGCC
CTGCACTACG TCTTCCACAC TCCCGACGAC CGCCTGATCT GGGACGTCGG CCACCAGGCC
TACCCGCACA AGATCCTCAC CGGCCGGCGC GACCGCATCC GCACCCTGCG CCAGGGCGGC
GGCCTCTCCG GCTTCACCAA GCGCGCCGAG AGCCCCTACG ATCCCTTCGG CGCCGCCCAC
TCCTCCACCT CCATCTCCGC CGGCCTCGGC ATGGCCGTCG CCCGCGACCT CGCCGAGGCC
GCCGCCCGCG CCCGCGGCGA GACCCCCGAG CGCCGCAACG TCGTGGCGGT CATCGGCGAC
GGATCCATCT CCGCCGGCAT GGCCTACGAG GCCATGAACA ACGCCGGCGC CCTGCGCTCC
CGCCTCGTCG TCATCCTCAA CGACATGTCC ATCGCGCCCC CGGTCGGCGC CATGTCGGCC
TACCTCGCCC GCCTGGTCTC CGGCGACACC TACCGCTCCC TGCGCGACAC CGCCCGCCAG
TTCGGCCGCC TGCTGCCCAA GGCCCTCTAC GACACCGCCG TGCGCGCCGA GGAATACGCC
CGCGGCATCC TGGCGGGCGG CGGCACCATG TTCGAGGAGC TCGGCTTCCA CTACGTCGGC
CCGATCGACG GCCACAACCT CGACCACCTG CTGCCCATCC TCAAGAACGT CCGCGACGCG
CCCGAGGGGC CGGTCCTGGT CCACGTCGTC ACCCAGAAGG GCAAGGGCTA CGCCCCCGCC
GAGGCCGCCG CCGACCGCGG CCACGCCGTG GTCAAGTTCG ACGTCGTCTC CGGCCAGCAG
GTCAAGGCCA AGGCCAACGC CCCGACCTAC ACCCGGGTGT TCGGCGAGAG CCTGGTCAAG
GCGGCGGACG CCGACGACAA GGTGGTGGCG ATCACCGCCG CGATGCCCTC CGGCACCGGG
GTCGACCTGT TCGCCAAGGC CCATCCGGGG CGCACCTTCG ACGTCGGCAT CGCCGAGCAG
CACGCCGTGA CCTTCGCGGC CGGGCTGGCG GCGGAGGGCT ACCGGCCGTT CTGCGCGATC
TACTCGACCT TCCTGCAGCG GGCCTACGAC CAGGTCGTGC ACGACGTGGC GCTGCAGAAC
CTGCCGGTGC GCTTCGCGCT CGACCGGGCC GGCCTGGTCG GGGCGGACGG GGCGACGCAT
GCGGGGGCCT TCGACCTGGC CTACCTGTGC TGCCTGCCCA ACATGGTGGT GATGGCGGCC
GCCGACGAGG CGGAGCTGGT GCACATGGTG GCGACCGCCC ACGCGCACGA TGCCGGCCCG
ATCGCCTTCC GCTACCCGCG GGGCGAGGGG GTGGGGGTGG ACCTGCCCGA GAAGGGCGAG
GTTCTGGCGC TGGGCCGCGG CCGGGTGATC CGGCGCCCGG AGGGGGCGCG GGTGGCGCTG
GTGAGCCTGG GGACGCGCCT GGCGGAGGCG CTGAAGGCGG CCGAGCAGCT GGAGGAGCGC
GGGATCGGGG TGACGGTGGC GGATGCGCGC TTTGCCAAGC CGCTGGACGA GGGGCTGCTG
CTGGATCTTG CGGGCAGCCA CGAGGTGCTG GTGACGGTGG AGGAGGGCTC GACCGGGGGC
TTCGGCGCGA TGGTGCTGCA CCTGCTCGCG GGGCGCGGGG CGCTGGATGC CGGGACGGTG
CGGGTGCGCA CGCTGACCCT GCCGGACAGC TACCAGGACC ACGACACGCC CGAGCGCATG
TACGCCCAGG CCGGCCTCGA CGCCCCCGCC ATCGTCCGAG CCGTCGAGCA CGCGCTCCCG
GACGAGCCGC GGGCCGCCAA GCGGCCCGCG CGCGACTCGA ACGTGGTGAG CGTCTCCCGC
CGCCCGCGCT GA
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| Protein sequence | MSPLSLPLLD RVRDPSELRA LPESDLAQLA AELRAETIDA VSVTGGHLGA GLGVVELTVA
LHYVFHTPDD RLIWDVGHQA YPHKILTGRR DRIRTLRQGG GLSGFTKRAE SPYDPFGAAH
SSTSISAGLG MAVARDLAEA AARARGETPE RRNVVAVIGD GSISAGMAYE AMNNAGALRS
RLVVILNDMS IAPPVGAMSA YLARLVSGDT YRSLRDTARQ FGRLLPKALY DTAVRAEEYA
RGILAGGGTM FEELGFHYVG PIDGHNLDHL LPILKNVRDA PEGPVLVHVV TQKGKGYAPA
EAAADRGHAV VKFDVVSGQQ VKAKANAPTY TRVFGESLVK AADADDKVVA ITAAMPSGTG
VDLFAKAHPG RTFDVGIAEQ HAVTFAAGLA AEGYRPFCAI YSTFLQRAYD QVVHDVALQN
LPVRFALDRA GLVGADGATH AGAFDLAYLC CLPNMVVMAA ADEAELVHMV ATAHAHDAGP
IAFRYPRGEG VGVDLPEKGE VLALGRGRVI RRPEGARVAL VSLGTRLAEA LKAAEQLEER
GIGVTVADAR FAKPLDEGLL LDLAGSHEVL VTVEEGSTGG FGAMVLHLLA GRGALDAGTV
RVRTLTLPDS YQDHDTPERM YAQAGLDAPA IVRAVEHALP DEPRAAKRPA RDSNVVSVSR
RPR
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