Gene RSP_1134 details

Gene Information

• Locus tag: RSP_1134
• Symbol: Dxs
• ID: 3720832
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodobacter sphaeroides 2.4.1
• Kingdom: Bacteria
• Replicon accession: NC_007493
• Strand: -
• Start bp: 2896821
• End bp: 2898734
• Gene Length: 1914 bp
• Protein Length: 637 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 640072364
• Product: 1-deoxy-D-xylulose-5-phosphate synthase
• Protein accession: YP_354219
• Protein GI: 77464715
• COG category: [H] Coenzyme transport and metabolism; [I] Lipid transport and metabolism
• COG ID: [COG1154] Deoxyxylulose-5-phosphate synthase
• TIGRFAM ID: [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.310959
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCGACA GACCCTGCAC GCCGACGCTC GACCGGGTGA CGCTCCCGGT GGACATAAAG 
GGCCTCACGG ACCGTGAGTT GCGCTCGCTG GCCGACGAGC TGCGGGCCGA AACGATCTCG 
GCCGTGTCGG TGACGGGCGG GCATCTGGGC GCAGGCCTCG GCGTGGTGGA GTTGACGGTT 
GCGCTGCATG CGATCTTCGA TGCGCCCCGC GACAAGATCA TCTGGGACGT GGGCCACCAG 
TGCTACCCCC ACAAGATCCT GACCGGGCGG CGCGACCGCA TCCGCACCCT GCGGCAGGGC 
GGGGGTCTCT CGGGCTTCAC CAAGCGCTCC GAGAGCCCCT ATGACTGTTT CGGCGCGGGC 
CATTCCTCGA CCTCGATCTC GGCCGCGGTG GGCTTTGCCG CGGCACGCGA GATGGGCGGC 
GACACGGGCG ACGCGGTGGC GGTGATCGGC GACGGCTCGA TGTCGGCCGG CATGGCCTTC 
GAGGCGCTGA ACCACGGCGG GCACCTGAAG AACCGGGTGA TCGTGATCCT GAACGACAAC 
GAGATGAGCA TCGCGCCGCC GGTGGGGGCG CTGTCGTCCT ATCTCTCGCG GCTCTATGCG 
GGCGCGCCGT TCCAGGACTT CAAGGCGGCC GCCAAGGGAG CGCTCGGGCT TCTGCCCGAA 
CCGTTCCAGG AGGGCGCGCG CCGCGCCAAG GAGATGCTGA AGAGCGTCAC CGTCGGCGGC 
ACGCTCTTCG AGGAGCTGGG TTTCTCCTAT GTCGGCCCGA TCGACGGGCA CGATCTCGAC 
CAGCTTCTGC CGGTGCTGCG GACCGTCAAG CAGCGGGCGC ATGCGCCGGT GCTGATCCAT 
GTCATCACCA AGAAGGGCAG GGGCTATGCT CCGGCCGAGG CCGCGCGCGA CCGTGGCCAT 
GCCACGAACA AGTTCAACGT CCTGACCGGC GCGCAGGTGA AGCCGGTCTC GAACGCCCCC 
TCCTATACCA AGGTCTTCGC CCAGAGCCTC ATCAAGGAGG CCGAGGTCGA CGAGCGGATC 
TGCGCGGTGA CGGCCGCCAT GCCGGACGGG ACGGGGCTCA ACCTCTTCGG CGAGCGGTTT 
CCGAAGCGCA CCTTCGATGT GGGCATCGCG GAACAGCATG CGGTGACCTT CTCGGCGGCG 
CTTGCGGCAG GCGGCATGCG GCCCTTCTGC GCCATCTATT CCACCTTCCT CCAGCGCGGC 
TACGACCAGA TCGTGCATGA CGTGGCGATC CAGCGCCTGC CGGTGCGCTT TGCCATCGAC 
CGCGCCGGCC TCGTGGGGGC GGACGGCGCC ACCCATGCGG GCTCGTTCGA TGTGGCCTTC 
CTGTCGAACC TGCCCGGCAT CGTGGTGATG GCCGCCGCCG ACGAGGCCGA GCTCGTCCAT 
ATGGTAGCCA CCGCCGCCGC CCATGACGAA GGGCCCATCG CCTTCCGCTA TCCGCGCGGC 
GACGGCGTGG GGGTCGAGAT GCCGGTGAAG GGCGTGCCGC TCCAGATCGG CCGTGGCCGG 
GTGGTGAGCG AGGGCACGCG AATCGCGCTC CTGTCCTTCG GCACCCGTCT GGCCGAGGTG 
CAGGTGGCCG CCGAGGCGCT GGCTGCGCGC GGGATCTCTC CCACGGTTGC GGATGCGCGC 
TTTGCAAAGC CGCTCGACCG GGATCTGATC CTGCAGCTCG CGGCCCATCA CGAGGCGCTC 
ATTACCATCG AGGAGGGCGC CATCGGCGGC TTCGGCAGCC ATGTGGCGCA GCTTCTGGCC 
GAGGCCGGGG TCTTCGACCG CGGCTTCCGG TATCGCTCGA TGGTGCTGCC CGACACGTTC 
ATCGACCACA ACAGCGCCGA AGTGATGTAT GCCACCGCCG GGCTGAATGC GGCCGACATA 
GAGCGGAAGG CGCTGGAGAC GCTGGGGGTG GAGGTCCTCG CCCGCCGCGC CTGA 

 

Protein sequence

MTDRPCTPTL DRVTLPVDIK GLTDRELRSL ADELRAETIS AVSVTGGHLG AGLGVVELTV 
ALHAIFDAPR DKIIWDVGHQ CYPHKILTGR RDRIRTLRQG GGLSGFTKRS ESPYDCFGAG 
HSSTSISAAV GFAAAREMGG DTGDAVAVIG DGSMSAGMAF EALNHGGHLK NRVIVILNDN 
EMSIAPPVGA LSSYLSRLYA GAPFQDFKAA AKGALGLLPE PFQEGARRAK EMLKSVTVGG 
TLFEELGFSY VGPIDGHDLD QLLPVLRTVK QRAHAPVLIH VITKKGRGYA PAEAARDRGH 
ATNKFNVLTG AQVKPVSNAP SYTKVFAQSL IKEAEVDERI CAVTAAMPDG TGLNLFGERF 
PKRTFDVGIA EQHAVTFSAA LAAGGMRPFC AIYSTFLQRG YDQIVHDVAI QRLPVRFAID 
RAGLVGADGA THAGSFDVAF LSNLPGIVVM AAADEAELVH MVATAAAHDE GPIAFRYPRG 
DGVGVEMPVK GVPLQIGRGR VVSEGTRIAL LSFGTRLAEV QVAAEALAAR GISPTVADAR 
FAKPLDRDLI LQLAAHHEAL ITIEEGAIGG FGSHVAQLLA EAGVFDRGFR YRSMVLPDTF 
IDHNSAEVMY ATAGLNAADI ERKALETLGV EVLARRA