| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1939 |
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| Symbol | |
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| ID | 5832595 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | + |
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| Start bp | 2158109 |
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| End bp | 2160082 |
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| Gene Length | 1974 bp |
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| Protein Length | 657 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641367739 |
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| Product | 1-deoxy-D-xylulose-5-phosphate synthase |
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| Protein accession | YP_001639409 |
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| Protein GI | 163851366 |
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| COG category | [H] Coenzyme transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1154] Deoxyxylulose-5-phosphate synthase |
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| TIGRFAM ID | [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCACTAG CGGACACGAC GATCCTTGAG GGTCTTGAGA CGCCGGATCG TCTCCGGCTT
CTGCCGGAGA GCGAGCTGCA GCGGGTCGCC GACGCGGTGC GCGCCGAGAT GATCGACGCC
GTGTCGATCA CCGGCGGCCA TCTCGGCTCG GGCCTGGGCG TGGTCGAACT CACGGTGGCG
CTCCACCACG TCTTCGACAC CCCCGACGAC CGCATCGTCT GGGACGTCGG ACACCAGTGC
TACCCGCACA AGATCCTCAC AGGCCGCCGC GACCGCATCC GCACGCTGCG CCAGGGCGGC
GGGCTGTCCG GCTTCACCAA GCGGTCGGAG AGCGAGTACG ACCCGTTCGG CGCGGCCCAC
TCCTCCACCT CGATCTCCGC CGCGCTCGGC ATGGCCGTGG CACGCGACCT CGAGGAGGCG
GACGCCAAGG CCAAGGGCGG CCCGGCGCCC AAACGCCGCA ACATGATCGC GGTGATCGGC
GACGGCTCGA TGTCGGCGGG CATGGCCTAC GAGGCCATGA ACAATGCCGG CGCCCTGCAC
TCGCGCCTCA TCGTCATCCT CAACGACAAC GACATGTCGA TCGCGCCCCC CGTCGGCGCG
ATGTCGGCCT ACCTCGCCCG GCTCGCCTCC GGCGGCACCT ATCGCTCACT GCGCGAGACC
GCCAAGCAGC TCGGCAAGCT GCTGCCGAAG GCGCTCTACC AGCGCGCGGC CGCCGCGGAG
GAGTATGCCC GCTCGCTGAT CGTCGGCGGC GGCACGATGT TCGAGGAGAT GGGCTTCCAC
TATGTCGGCC CGGTCGATGG GCACAATCTC GACCACCTGC TCCCCGTTCT GAAGAACGTG
CGCGACTCGG ATCAGGGCCC GATCCTGCTC CATGTCGTCA CGCAGAAGGG CAAGGGCTAC
GCCCCGGCGG AGGCATCCGC CGACCGCTAC CACGGCGTGG TCAAGTTCGA CGTGGTTTCG
GGCGTGCAGG CCAAGGCCAA GGCCAACGCC CCGGCCTATA CCCGCGTGTT CGGCGAGAGC
CTGATCAAGG CGGCCGACGC CGACCCGAAG GTGGTGGCGA TCACCGCGGC GATGCCCGGC
GGCACCGGGA TCGACCTGTT CGGCAAGGCG CATCCCGACC GGACCTTCGA CGTCGGCATC
GCCGAGCAGC ACGCGGTAAC CTTTGCTGGC GGCTTGGCTA CCGAGGGCTA CAAGCCGTTT
GTGGCGATCT ACTCGACCTT CCTGCAGCGG GCCTACGATC AGGTCGTGCA CGATGTCGCG
CTGCAGAACT TAGCCGTGCG GTTCTGCCTC GACCGGGCGG GACTGGTGGG CGCGGACGGC
GCCACGCATG CGGGCGCGTT CGATCTGGCC TATCTCTGCT GCCTGCCGAA CATGACGGTG
ATGGCGGCGG CCGACGAGGC CGAGCTGGTG CATATGGTGG CGACCTGCCA CGCGCACGAT
TCGGGTCCGA TCGCGCTGCG CTACCCGCGC GGCGAGGGGG TCGGGATCGA GCTGCCGGAG
ACGGGCGTGC CGCTGGCGAT CGGCCGCGGC CGCGTGGTGC GGCGTCCGGA AGGGGCGCGG
GTGGCGCTGC TCTCGCTCGG CACGCGGTTG TCGGAGGCGC TGAAGGCAGC CGACGCGCTG
GAGGCCGAGG GGGTGGCGGC CACGGTCGCG GATGCGCGCT TTGCCAAGCC GCTGGATGCC
GAGCTGATCG TCGATCTGGC GATGAGCCAC GAGGTTCTGG TGACGGTCGA GGAAGGCTCG
GTCGGCGGCT TCGGGGCGAT GGTGCTGCAC CTGCTGGCCG AGCGCGGCGT GCTCGATACC
GGCCGGGTCC GGGTCCGCAC GCTGACGCTG CCGGACTTGT ACCAGGACCA CGACAAGCCG
GAGAAGATGT ACGCCGAGGC CGGGCTCGAT GCCGAGGGCA TCCTCAAGGC CGTCCGCGCC
GCGCTGCCGG ACCAGAAGAA GGGCAGCCGG ACCGGGCGCC TGCGTCTGGC TTGA
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| Protein sequence | MALADTTILE GLETPDRLRL LPESELQRVA DAVRAEMIDA VSITGGHLGS GLGVVELTVA
LHHVFDTPDD RIVWDVGHQC YPHKILTGRR DRIRTLRQGG GLSGFTKRSE SEYDPFGAAH
SSTSISAALG MAVARDLEEA DAKAKGGPAP KRRNMIAVIG DGSMSAGMAY EAMNNAGALH
SRLIVILNDN DMSIAPPVGA MSAYLARLAS GGTYRSLRET AKQLGKLLPK ALYQRAAAAE
EYARSLIVGG GTMFEEMGFH YVGPVDGHNL DHLLPVLKNV RDSDQGPILL HVVTQKGKGY
APAEASADRY HGVVKFDVVS GVQAKAKANA PAYTRVFGES LIKAADADPK VVAITAAMPG
GTGIDLFGKA HPDRTFDVGI AEQHAVTFAG GLATEGYKPF VAIYSTFLQR AYDQVVHDVA
LQNLAVRFCL DRAGLVGADG ATHAGAFDLA YLCCLPNMTV MAAADEAELV HMVATCHAHD
SGPIALRYPR GEGVGIELPE TGVPLAIGRG RVVRRPEGAR VALLSLGTRL SEALKAADAL
EAEGVAATVA DARFAKPLDA ELIVDLAMSH EVLVTVEEGS VGGFGAMVLH LLAERGVLDT
GRVRVRTLTL PDLYQDHDKP EKMYAEAGLD AEGILKAVRA ALPDQKKGSR TGRLRLA
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