Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_1830 |
Symbol | |
ID | 6312719 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | + |
Start bp | 1967067 |
End bp | 1969049 |
Gene Length | 1983 bp |
Protein Length | 660 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 642650553 |
Product | 1-deoxy-D-xylulose-5-phosphate synthase |
Protein accession | YP_001924528 |
Protein GI | 188581083 |
COG category | [H] Coenzyme transport and metabolism [I] Lipid transport and metabolism |
COG ID | [COG1154] Deoxyxylulose-5-phosphate synthase |
TIGRFAM ID | [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGGCTT TGGCACTAGC GGACACGACG ATCCTCGAGG GTCTTGAGAC GCCGGATCGT CTCCGGCTTC TGCCGGAGAG CGAGCTGCAG CGGGTCGCCG ACGCGGTGCG CGCCGAGATG ATCGACGCCG TGTCGATCAC CGGTGGCCAT CTCGGCTCGG GGCTCGGCGT GGTCGAGCTG ACGGTGGCGC TCCACCACGT GTTCGACACC CCCGACGACC GCATCGTCTG GGACGTCGGC CACCAGTGCT ACCCGCACAA GATCCTCACC GGTCGCCGCG ACCGCATCCG CACGCTCCGC CAGGGCGGCG GCCTGTCCGG CTTCACCAAG CGCTCGGAGA GCGAGTACGA CCCCTTCGGC GCGGCCCACT CCTCGACCTC GATCTCGGCC GCGCTCGGCA TGGCGGTCGC CCGCGACCTC GACGATGCCG AGGCCAAGGC GAAGGGCGAG GCGCCGGGGA AGCGCCGCAA CATGATCGCG GTGATCGGCG ACGGCTCGAT GTCGGCGGGC ATGGCCTACG AGGCCATGAA CAATGCCGGC GCGCTGCACT CGCGCCTGAT CGTCATCCTC AACGACAACG ACATGTCGAT CGCGCCCCCC GTCGGCGCCA TGTCGGCCTA TCTCGCGCGG CTGGCTTCGG GGGGCACCTA CCGGAGCTTA CGCGAGACCG CCAAGCAACT CGGCAAGCTG CTGCCGAAGG CGCTCTACCA GCGCGCGGCG GCGGCCGAGG AGTATGCCCG CTCGCTGATC GTCGGCGGCG GCACGATGTT CGAGGAGATG GGCTTCCACT ATGTGGGGCC GGTCGACGGG CACAACCTCG ACCACCTGCT CCCCGTTCTG AAGAACGTGC GCGACTCGGA CCAGGGTCCG ATCCTGCTCC ACGTGGTGAC GCAGAAGGGC AAGGGCTACG CCCCGGCGGA GGCCTCGGCC GACCGCTACC ACGGCGTGGT CAAGTTCGAC GTGGTCTCAG GCGTGCAGGC CAAGGCCAAG GCGAACGCCC CGGCCTATAC GCGGGTGTTT GGCGAGAGCC TGATCAAGGC GGCCGATGCC GATCCGAAGG TGGTGGCGAT CACCGCGGCC ATGCCCGGCG GCACCGGCAT CGACCTGTTC GGCAAGGCGC ATCCGGACAG GACCTTCGAC GTCGGCATCG CCGAGCAGCA CGCGGTGACC TTTGCCGGCG GTCTGGCGAC CGAGGGCTAC AAGCCGTTCG TGGCGATCTA CTCGACCTTC CTACAGCGGG CCTACGATCA GGTCGTGCAC GACGTGGCCT TGCAGAACCT GCCCGTGCGG TTCTGCCTCG ACCGGGCCGG TCTGGTGGGG GCGGACGGGG CGACCCATGC GGGCGCGTTC GATCTGGCCT ATCTGTGCTG CCTGCCGAAC ATGACGGTGA TGGCGGCCGC CGACGAGGCC GAGCTGGTGC ACATGGTGGC CACCGCGCAT GCGCATGACT CGGGGCCGAT CGCCCTGCGC TACCCGCGCG GCGAGGGGGT CGGCGTCGAG CTGCCGGAGA GCGGCGAGCC GCTGGCCATC GGTCGCGGGC GTGTGGTGCG CCGTCCGGAA GGGGCGCGGG TGGCGCTTCT GTCGCTGGGC ACGCGCCTGT CGGAGGCTCT GAAGGCGGCC GACGCGCTGG AGGCGGAGGG TGTTGCGGTG AGCGTGGCGG ATGCGCGCTT TGCCAAGCCG CTGGATGCCG AGATGATCGT GGATCTGGCC AACAGCCACG AGGTTCTGGT GACGGTGGAG GAAGGCTCGG TCGGCGGCTT CGGCGCGATG GTGCTGCACC TGTTGTCGGA GCGGGGCGTT CTGGATGCGG GCCGTGTCCG GGTGCGGACG CTGACGCTGC CGGACGTCTA CCAGGACCAC GACAAGCCGG AGAAGATGTA CGCCGAGGCC GGTCTCGACG CCGAGGGCAT CCTCAAGGCC GTCCGCGCCG CCCTGCCGGA CCAGAAGAAG GGCAGTCGGA CCGGACGCCT GCGTCTGGCC TGA
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Protein sequence | MKALALADTT ILEGLETPDR LRLLPESELQ RVADAVRAEM IDAVSITGGH LGSGLGVVEL TVALHHVFDT PDDRIVWDVG HQCYPHKILT GRRDRIRTLR QGGGLSGFTK RSESEYDPFG AAHSSTSISA ALGMAVARDL DDAEAKAKGE APGKRRNMIA VIGDGSMSAG MAYEAMNNAG ALHSRLIVIL NDNDMSIAPP VGAMSAYLAR LASGGTYRSL RETAKQLGKL LPKALYQRAA AAEEYARSLI VGGGTMFEEM GFHYVGPVDG HNLDHLLPVL KNVRDSDQGP ILLHVVTQKG KGYAPAEASA DRYHGVVKFD VVSGVQAKAK ANAPAYTRVF GESLIKAADA DPKVVAITAA MPGGTGIDLF GKAHPDRTFD VGIAEQHAVT FAGGLATEGY KPFVAIYSTF LQRAYDQVVH DVALQNLPVR FCLDRAGLVG ADGATHAGAF DLAYLCCLPN MTVMAAADEA ELVHMVATAH AHDSGPIALR YPRGEGVGVE LPESGEPLAI GRGRVVRRPE GARVALLSLG TRLSEALKAA DALEAEGVAV SVADARFAKP LDAEMIVDLA NSHEVLVTVE EGSVGGFGAM VLHLLSERGV LDAGRVRVRT LTLPDVYQDH DKPEKMYAEA GLDAEGILKA VRAALPDQKK GSRTGRLRLA
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