More than 300 homologs were found in PanDaTox collection
for query gene Tpet_0636 on replicon NC_009486
Organism: Thermotoga petrophila RKU-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010483  TRQ2_0661  extracellular solute-binding protein  98.31 
 
 
415 aa  832    Thermotoga sp. RQ2  Bacteria  unclonable  0.00000689748  n/a   
 
 
-
 
NC_009486  Tpet_0636  extracellular solute-binding protein  100 
 
 
415 aa  847    Thermotoga petrophila RKU-1  Bacteria  unclonable  0.00000000210277  n/a   
 
 
-
 
NC_011661  Dtur_1732  extracellular solute-binding protein family 1  65.32 
 
 
415 aa  565  1e-160  Dictyoglomus turgidum DSM 6724  Bacteria  unclonable  0.000000000368486  n/a   
 
 
-
 
NC_013947  Snas_0203  extracellular solute-binding protein family 1  29.27 
 
 
441 aa  155  2e-36  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.346278  normal  0.123927 
 
 
-
 
NC_013526  Tter_2209  extracellular solute-binding protein family 1  26.63 
 
 
487 aa  131  2.0000000000000002e-29  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0178  extracellular solute-binding protein family 1  25.38 
 
 
449 aa  124  4e-27  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0648  extracellular solute-binding protein family 1  26.12 
 
 
447 aa  111  2.0000000000000002e-23  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_010003  Pmob_0721  extracellular solute-binding protein  26.46 
 
 
437 aa  107  3e-22  Petrotoga mobilis SJ95  Bacteria  normal  0.540981  n/a   
 
 
-
 
NC_010003  Pmob_0289  extracellular solute-binding protein  26.13 
 
 
437 aa  103  5e-21  Petrotoga mobilis SJ95  Bacteria  unclonable  0.00000019091  n/a   
 
 
-
 
NC_013721  HMPREF0424_1316  extracellular solute-binding protein  24.89 
 
 
423 aa  99.4  1e-19  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_011899  Hore_20630  extracellular solute-binding protein family 1  26.84 
 
 
414 aa  99  1e-19  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_009621  Smed_5582  extracellular solute-binding protein  25.25 
 
 
424 aa  99.4  1e-19  Sinorhizobium medicae WSM419  Bacteria  normal  0.152115  normal  0.231128 
 
 
-
 
NC_014213  Mesil_3226  Transcriptional regulator  23.95 
 
 
410 aa  92  2e-17  Meiothermus silvanus DSM 9946  Bacteria  normal  0.101031  normal 
 
 
-
 
NC_014213  Mesil_3422  ABC-type sugar transport systems permease component  23.95 
 
 
410 aa  92  2e-17  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_009939  Dgeo_2919  ABC-type sugar transport system, periplasmic component  22.74 
 
 
407 aa  91.3  3e-17  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_013525  Tter_0427  extracellular solute-binding protein family 1  25.24 
 
 
497 aa  85.9  0.000000000000001  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_014210  Ndas_1085  extracellular solute-binding protein family 1  24.86 
 
 
451 aa  84.3  0.000000000000004  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.474529 
 
 
-
 
NC_008010  Dgeo_2726  extracellular solute-binding protein  23.06 
 
 
437 aa  83.2  0.000000000000008  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.290956  n/a   
 
 
-
 
NC_010483  TRQ2_1696  extracellular solute-binding protein  25.79 
 
 
436 aa  80.1  0.00000000000006  Thermotoga sp. RQ2  Bacteria  hitchhiker  0.00506774  n/a   
 
 
-
 
NC_013411  GYMC61_2731  extracellular solute-binding protein family 1  24.23 
 
 
454 aa  78.6  0.0000000000002  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012669  Bcav_2876  extracellular solute-binding protein family 1  24.32 
 
 
451 aa  78.2  0.0000000000003  Beutenbergia cavernae DSM 12333  Bacteria  normal  hitchhiker  0.00736508 
 
 
-
 
NC_014210  Ndas_0752  putative extracellular solute-binding protein  23.95 
 
 
439 aa  77.4  0.0000000000005  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.31197  normal 
 
 
-
 
NC_010320  Teth514_2201  extracellular solute-binding protein  23.88 
 
 
420 aa  77  0.0000000000006  Thermoanaerobacter sp. X514  Bacteria  normal  0.455559  n/a   
 
 
-
 
NC_008709  Ping_2511  sugar ABC transporter extracellular solute-binding family 1 protein  22.48 
 
 
425 aa  76.3  0.0000000000008  Psychromonas ingrahamii 37  Bacteria  normal  0.98381  normal  0.711564 
 
 
-
 
NC_014212  Mesil_0955  extracellular solute-binding protein family 1  22.6 
 
 
437 aa  75.5  0.000000000001  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.152307 
 
 
-
 
NC_008243  Meso_4520  extracellular solute-binding protein  22.63 
 
 
415 aa  75.5  0.000000000002  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_3456  extracellular solute-binding protein  24.46 
 
 
444 aa  75.1  0.000000000002  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.559777  normal 
 
 
-
 
NC_013739  Cwoe_4883  extracellular solute-binding protein family 1  23.74 
 
 
436 aa  75.5  0.000000000002  Conexibacter woesei DSM 14684  Bacteria  normal  0.504344  normal 
 
 
-
 
NC_010003  Pmob_1492  extracellular solute-binding protein  26.79 
 
 
421 aa  74.7  0.000000000003  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_0753  extracellular solute-binding protein  26.4 
 
 
437 aa  74.7  0.000000000003  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_19770  extracellular solute-binding protein family 1  24.48 
 
 
423 aa  74.3  0.000000000004  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_0475  extracellular solute-binding protein family 1  24.21 
 
 
397 aa  73.9  0.000000000005  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_012793  GWCH70_1392  extracellular solute-binding protein family 1  22.41 
 
 
445 aa  73.6  0.000000000006  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0224  extracellular solute-binding protein  23.76 
 
 
431 aa  72.4  0.00000000001  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_5802  extracellular solute-binding protein family 1  21.32 
 
 
444 aa  72.4  0.00000000001  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.0809589 
 
 
-
 
NC_011899  Hore_20470  extracellular solute-binding protein family 1  21.38 
 
 
406 aa  71.2  0.00000000003  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.0000000403753  n/a   
 
 
-
 
NC_013526  Tter_2294  extracellular solute-binding protein family 1  22.49 
 
 
448 aa  71.2  0.00000000003  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_29420  carbohydrate-binding protein  22.92 
 
 
445 aa  70.1  0.00000000006  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_3697  glycerol-3-phosphate transporter periplasmic binding protein  23.8 
 
 
441 aa  70.5  0.00000000006  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009620  Smed_4916  extracellular solute-binding protein  25.13 
 
 
410 aa  70.5  0.00000000006  Sinorhizobium medicae WSM419  Bacteria  normal  0.06645  normal  0.512511 
 
 
-
 
NC_012669  Bcav_2263  extracellular solute-binding protein family 1  24.44 
 
 
441 aa  70.1  0.00000000007  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.431886  normal 
 
 
-
 
NC_011369  Rleg2_3669  extracellular solute-binding protein family 1  21.88 
 
 
492 aa  70.1  0.00000000008  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_012848  Rleg_4863  extracellular solute-binding protein family 1  21.01 
 
 
492 aa  69.3  0.0000000001  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.426159 
 
 
-
 
NC_012850  Rleg_3430  extracellular solute-binding protein family 1  25.61 
 
 
415 aa  69.3  0.0000000001  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_3276  extracellular solute-binding protein family 1  23.62 
 
 
420 aa  69.3  0.0000000001  Cyanothece sp. PCC 7425  Bacteria  normal  0.147153  normal  0.336546 
 
 
-
 
NC_010003  Pmob_0144  extracellular solute-binding protein  25.83 
 
 
403 aa  69.3  0.0000000001  Petrotoga mobilis SJ95  Bacteria  normal  0.442205  n/a   
 
 
-
 
NC_006348  BMA2744  glycerol-3-phosphate transporter periplasmic binding protein  23.8 
 
 
441 aa  68.6  0.0000000002  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_3726  glycerol-3-phosphate transporter periplasmic binding protein  23.8 
 
 
441 aa  68.6  0.0000000002  Burkholderia pseudomallei 1710b  Bacteria  normal  0.268589  n/a   
 
 
-
 
NC_013421  Pecwa_0117  glycerol-3-phosphate transporter periplasmic binding protein  22.1 
 
 
444 aa  68.2  0.0000000002  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3306  extracellular solute-binding protein  23.5 
 
 
431 aa  68.6  0.0000000002  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_008785  BMASAVP1_A3209  glycerol-3-phosphate transporter periplasmic binding protein  23.8 
 
 
441 aa  68.6  0.0000000002  Burkholderia mallei SAVP1  Bacteria  normal  0.0248662  n/a   
 
 
-
 
NC_008836  BMA10229_A1760  glycerol-3-phosphate transporter periplasmic binding protein  23.8 
 
 
441 aa  68.6  0.0000000002  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2794  glycerol-3-phosphate transporter periplasmic binding protein  23.8 
 
 
441 aa  68.6  0.0000000002  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_0690  extracellular solute-binding protein  23.69 
 
 
402 aa  68.6  0.0000000002  Thermosipho melanesiensis BI429  Bacteria  normal  0.678935  n/a   
 
 
-
 
NC_009832  Spro_0234  glycerol-3-phosphate transporter periplasmic binding protein  22.83 
 
 
439 aa  68.9  0.0000000002  Serratia proteamaculans 568  Bacteria  normal  normal  0.500336 
 
 
-
 
NC_013745  Htur_4488  extracellular solute-binding protein family 1  25.29 
 
 
434 aa  67.8  0.0000000003  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.395657  n/a   
 
 
-
 
NC_011769  DvMF_0656  extracellular solute-binding protein family 1  23.26 
 
 
431 aa  67.8  0.0000000003  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.31335 
 
 
-
 
NC_011988  Avi_5711  sugar uptake ABC transporter periplasmic solute-binding protein precursor  25 
 
 
448 aa  68.2  0.0000000003  Agrobacterium vitis S4  Bacteria  normal  0.188634  n/a   
 
 
-
 
NC_012917  PC1_0125  glycerol-3-phosphate transporter periplasmic binding protein  22.15 
 
 
444 aa  67.4  0.0000000004  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I3021  glycerol-3-phosphate transporter periplasmic binding protein  23.79 
 
 
441 aa  67  0.0000000005  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_3755  glycerol-3-phosphate transporter periplasmic binding protein  23.8 
 
 
441 aa  67  0.0000000006  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_4241  extracellular solute-binding protein family 1  25.91 
 
 
422 aa  67  0.0000000006  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_3957  extracellular solute-binding protein family 1  23.93 
 
 
432 aa  67  0.0000000006  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7906  extracellular solute-binding protein family 1  26.36 
 
 
420 aa  66.6  0.0000000008  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.819994  normal 
 
 
-
 
NC_011992  Dtpsy_2659  extracellular solute-binding protein family 1  23.7 
 
 
431 aa  66.2  0.0000000009  Acidovorax ebreus TPSY  Bacteria  decreased coverage  0.00136924  n/a   
 
 
-
 
NC_013205  Aaci_0075  extracellular solute-binding protein family 1  26.36 
 
 
441 aa  66.2  0.0000000009  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_07110  carbohydrate-binding protein  21.53 
 
 
462 aa  66.2  0.000000001  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.666821 
 
 
-
 
NC_013172  Bfae_29320  ABC-type sugar transport system, periplasmic component  27.23 
 
 
443 aa  65.9  0.000000001  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_014213  Mesil_3394  ABC-type sugar transport systems permease component  23.79 
 
 
411 aa  65.5  0.000000002  Meiothermus silvanus DSM 9946  Bacteria  normal  0.498756  normal  0.24931 
 
 
-
 
NC_008043  TM1040_3216  extracellular solute-binding protein  24.04 
 
 
425 aa  65.5  0.000000002  Ruegeria sp. TM1040  Bacteria  normal  normal  0.949389 
 
 
-
 
NC_012852  Rleg_6156  extracellular solute-binding protein family 1  24.1 
 
 
410 aa  65.1  0.000000002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.889741  hitchhiker  0.000305646 
 
 
-
 
NC_009767  Rcas_0113  extracellular solute-binding protein  23.33 
 
 
455 aa  65.5  0.000000002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.270734  normal 
 
 
-
 
NC_009636  Smed_2146  extracellular solute-binding protein  25.38 
 
 
414 aa  65.1  0.000000002  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_1727  extracellular solute-binding protein family 1  23.77 
 
 
422 aa  64.3  0.000000003  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_004311  BRA1180  sugar ABC transporter, periplasmic sugar-binding protein, putative  23.64 
 
 
421 aa  64.7  0.000000003  Brucella suis 1330  Bacteria  normal  0.409061  n/a   
 
 
-
 
NC_009486  Tpet_0118  extracellular solute-binding protein  32.91 
 
 
420 aa  64.7  0.000000003  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0116  extracellular solute-binding protein  32.91 
 
 
420 aa  64.7  0.000000003  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_6751  extracellular solute-binding protein family 1  21.66 
 
 
441 aa  64.7  0.000000003  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_4038  extracellular solute-binding protein family 1  22.68 
 
 
405 aa  64.3  0.000000004  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_0729  extracellular solute-binding protein family 1  29.72 
 
 
443 aa  63.9  0.000000005  Chloroflexus aggregans DSM 9485  Bacteria  decreased coverage  0.0000254304  normal 
 
 
-
 
NC_009654  Mmwyl1_2716  extracellular solute-binding protein  22.25 
 
 
433 aa  63.9  0.000000005  Marinomonas sp. MWYL1  Bacteria  normal  0.835001  normal 
 
 
-
 
NC_009436  Ent638_3856  glycerol-3-phosphate transporter periplasmic binding protein  23.9 
 
 
440 aa  63.5  0.000000006  Enterobacter sp. 638  Bacteria  normal  normal  0.64819 
 
 
-
 
NC_011371  Rleg2_6572  extracellular solute-binding protein family 1  23.59 
 
 
410 aa  63.5  0.000000007  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  decreased coverage  0.00103217  normal  0.480926 
 
 
-
 
NC_011369  Rleg2_3622  extracellular solute-binding protein family 1  24.49 
 
 
412 aa  63.2  0.000000007  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_009620  Smed_4136  extracellular solute-binding protein  26.81 
 
 
424 aa  63.2  0.000000009  Sinorhizobium medicae WSM419  Bacteria  normal  0.518326  normal 
 
 
-
 
NC_012669  Bcav_0015  extracellular solute-binding protein family 1  21.35 
 
 
470 aa  62.8  0.00000001  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.768674  normal 
 
 
-
 
NC_007494  RSP_3674  ABC sugar transporter, periplasmic binding protein  22.68 
 
 
404 aa  62.8  0.00000001  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_012854  Rleg_6528  extracellular solute-binding protein family 1  23.18 
 
 
415 aa  62.4  0.00000001  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.0147922 
 
 
-
 
NC_010320  Teth514_1099  extracellular solute-binding protein  22.87 
 
 
457 aa  62  0.00000002  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_0513  extracellular solute-binding protein family 1  26.42 
 
 
447 aa  62  0.00000002  Jonesia denitrificans DSM 20603  Bacteria  decreased coverage  0.000000038068  hitchhiker  0.000703825 
 
 
-
 
NC_007951  Bxe_A0448  glycerol-3-phosphate transporter periplasmic binding protein  22.52 
 
 
441 aa  62  0.00000002  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009050  Rsph17029_3409  extracellular solute-binding protein  23.02 
 
 
404 aa  62  0.00000002  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.280364  normal  0.614723 
 
 
-
 
NC_007413  Ava_1229  extracellular solute-binding protein  22.16 
 
 
461 aa  61.6  0.00000003  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0257979  normal  0.868479 
 
 
-
 
NC_010508  Bcenmc03_0374  glycerol-3-phosphate transporter periplasmic binding protein  22.86 
 
 
444 aa  61.2  0.00000003  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_4566  extracellular solute-binding protein  23.06 
 
 
453 aa  61.6  0.00000003  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_2466  extracellular solute-binding protein family 1  22.22 
 
 
415 aa  61.6  0.00000003  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.0930087 
 
 
-
 
NC_010681  Bphyt_3509  glycerol-3-phosphate transporter periplasmic binding protein  22.52 
 
 
441 aa  61.6  0.00000003  Burkholderia phytofirmans PsJN  Bacteria  normal  0.839022  normal  0.0272066 
 
 
-
 
NC_014158  Tpau_1269  extracellular solute-binding protein family 1  27.78 
 
 
412 aa  61.2  0.00000003  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_2845  extracellular solute-binding protein family 1  26.55 
 
 
439 aa  60.8  0.00000004  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010622  Bphy_2709  glycerol-3-phosphate transporter periplasmic binding protein  23.31 
 
 
441 aa  60.8  0.00000004  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
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