| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5711 |
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| Symbol | |
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| ID | 7381597 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 735746 |
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| End bp | 737092 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643649269 |
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| Product | sugar uptake ABC transporter periplasmic solute-binding protein precursor |
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| Protein accession | YP_002547506 |
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| Protein GI | 222106715 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.188634 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGCGA CGCCAATCAA ATCGAGGATC ATGAAACTGA TGCGCACCAC CATTCCGGTG
GTGGCACTGA TGATGGGCCA TGCCGCCTTC GCGGCGGAGC CTGTGGAACT GAACGTCCAA
AGGTTCTTCG GCGCCTGCGA TGCCGAATAT GGCAGCAATA CAGACGTCAG CAAATCGGTC
GGCGAATGTG GGATCATGAC CTCGCTGATC AACAAGTTCA ACGCCGATAA TCCCGACATC
CATGTGTCGG TGGCGACTGT GGAATGGCCG GGCTATGACC AGCTCAACGC GCAATTTGCC
TCCAACGATC CGCCTGACAT CGTCACGATC CATGAATCGG CCTTGTCGGA TTATCAGTCC
AAAAACCTTA TCATGCCGCT GGACGAGCTT TTGGCCACCC AAGGCATCAA GCCTGAAACC
TTTACCGAGG CGGCGCGGCA GGGCGCGACC AAGGACGGCA AGTTCTATGG ATTGCCGATC
GACAGCTGGA CCATGCTCTA CCATATCAAT ATGGATCTGT TTAAGCAGGC GGGTCTCGTC
AATGCCGATG GCACACCGAT CCTGCCGAAA TCCCCGGAAG AGCTTCTGGC CCAGGCCGAA
CAGTTCAAGC AGAAGACCGG CAAGCCTTAT TTCGTGCAGA ATCTTGCCAA TGAGACGGCG
CTCTACATGC GCAATCTCTA TACCTACCTG TTCCAGCAAA ACTCTGATTT CTTCGCCGAT
CCAACCCATA TCAAGCTCGA CACGCCTGAG GCCAAGCGGG TGGTGGAGAT GTACCGAACC
ATCTTTGCCA AGGGCTATAC CACCAAGGAC ATGGATTACG GCGCCTCGAT CACTGCCTTT
CTGGCCGGTG CCGGCGGTGT TCATCTGAAC GGCACCTGGA TGATTGGCGA TTATAATGCC
TCGGCTGCCA AACCGGGCAC GGCGCTGAAC AAGGGCGGTT ATGCCGTCTA TCCCTATCCG
CAATTGTTTT CCGGCGATCA CGCGCAGTTT GCCGATGGTC ATACCTGGGC TGTTTCCGTC
AAGGACCGGA CGCCCGAACA GACCAAGGCC GTGGCGCGGT TCCTGAAATT CTTCGTCGAC
AATGATTTCG ATTGGTCGCG CACCGGCCAC CTGCCATCCG TGCAGGCTGT GCTGAACTCT
GATGCCTTCA AGGCCCTGCC GCACCGCGAC ACGGTGTCTG ATATTGCCCA GCTTGGGCGG
CCACTGCCGT CGCAAGTGCA GCGCCAGTTC CCGATCCAGG ACATTATCGG CGAAGAAATG
AGCGCTGCGG TGACCGGTCA GAAGGATGTC GACGCGGCCT TGAAGGATGC CCAAAGCCGG
GTGAATGACC TGCTTGGCAA TCTGTAA
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| Protein sequence | MKATPIKSRI MKLMRTTIPV VALMMGHAAF AAEPVELNVQ RFFGACDAEY GSNTDVSKSV
GECGIMTSLI NKFNADNPDI HVSVATVEWP GYDQLNAQFA SNDPPDIVTI HESALSDYQS
KNLIMPLDEL LATQGIKPET FTEAARQGAT KDGKFYGLPI DSWTMLYHIN MDLFKQAGLV
NADGTPILPK SPEELLAQAE QFKQKTGKPY FVQNLANETA LYMRNLYTYL FQQNSDFFAD
PTHIKLDTPE AKRVVEMYRT IFAKGYTTKD MDYGASITAF LAGAGGVHLN GTWMIGDYNA
SAAKPGTALN KGGYAVYPYP QLFSGDHAQF ADGHTWAVSV KDRTPEQTKA VARFLKFFVD
NDFDWSRTGH LPSVQAVLNS DAFKALPHRD TVSDIAQLGR PLPSQVQRQF PIQDIIGEEM
SAAVTGQKDV DAALKDAQSR VNDLLGNL
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