| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_3409 |
|---|
| Symbol | |
|---|
| ID | 4898961 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009050 |
|---|
| Strand | - |
|---|
| Start bp | 476359 |
|---|
| End bp | 477573 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640114006 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_001045274 |
|---|
| Protein GI | 126464161 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.280364 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.614723 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGAA CCATCAGCGC GCTGGCCCTT CTGGCCGGCC TCGCGCCGGG GATCGCCTCG
GCCGACAGCA CCGTCCGCTT CTGGTATCAC TTCGACAATC CGGAAAACCC GATGTCGGAT
CTGGTGGCCA AGTTCGAGGA AGCGAACCCG GGCATCAGGA TCGACGCGCA GAACGTGCCC
TGGAACAGCT ATTACGACAA TCTCTACACG GCCATCGTTG GCGGCAACGC GCCCGACGCG
GCCATGCTGA AGATGTTCGC CCTGCCGCGC CTTCTCGAGA TGGAGGCGCT CGAGCCGCTC
GACGAGATGA TCGCGGGCTG GGAGGGCCGC GACGACATCC TCGACAATCT CTTCGACCTG
ACCGAGGCCG AGGATGGCAA GCACTATTAC CTGCCGGTGC AATATGTGGC GCTCTACCTC
TATTACCGCG CCGACATGTT CGAGGAGCTG GGCCTCGCCC CGCCCGAGAC CTGCGACCAG
TTCCGCGAAG CCGCGATCAA GCTCACCCGC GACACGAACA ACGACGGCAA GATCGACACC
TACGGGTTCG GCTTCCGCGG CGGCAAGTCC GGGCACGAAC ATTGGGGCGC CTTCACCCTC
GGCCGCGAGG GCGTGGCGCT CGATGACAGC CTCACCTCCG AGGCCGGCGT GGCGGGCACG
CAGTTCGTGG TGGATCTCTT CCAGAAGGAC AAGGTCTTCC CGCCCTCGGC CCCGAACGAC
GGCTTTCAGG AGATCATCGG CGCCTTCAAG ACCGGCGTGA CCGCGATGAC GATCCATCAT
GTCGGCTCCT CGAACGATCT GGTGGCGGCG CTGGGCGACA AGGTCGCGGC CGTGCCGGTG
CCGGAATGCG GCGGCGGGCG CTGGACCACC TTCGGCGACG AATCCACCGG CGTCTTCAGC
AATGCCAGCG ACAAGGAAGC CGCCTGGAAG TGGATCGCGT TCCTTTCGTC GGAGGGCAAC
AACGCGCTCT TCAACAGCGC CACCGGCCAG CTTCCGGTGA CCAAGAGCGA CAGCGCCACC
TGGGACCAGC ACGAGAAGCG CTTCGTCGAC GCGACCCAGG CCTCGCTCCC CTTCGCCCAT
CTGCTGCCCG CCTCCTCGGC CACGCCCGAG TTCGTGAACA CCGTCTGGCC CACGAACATG
CAGCGCGCGC TGAACGGGGA GATCACCGCC GCCCAGATGA ACGAAGCCAT CGCCAAGCTC
TTCGCCGAAG AGTGA
|
|---|
| Protein sequence | MKRTISALAL LAGLAPGIAS ADSTVRFWYH FDNPENPMSD LVAKFEEANP GIRIDAQNVP
WNSYYDNLYT AIVGGNAPDA AMLKMFALPR LLEMEALEPL DEMIAGWEGR DDILDNLFDL
TEAEDGKHYY LPVQYVALYL YYRADMFEEL GLAPPETCDQ FREAAIKLTR DTNNDGKIDT
YGFGFRGGKS GHEHWGAFTL GREGVALDDS LTSEAGVAGT QFVVDLFQKD KVFPPSAPND
GFQEIIGAFK TGVTAMTIHH VGSSNDLVAA LGDKVAAVPV PECGGGRWTT FGDESTGVFS
NASDKEAAWK WIAFLSSEGN NALFNSATGQ LPVTKSDSAT WDQHEKRFVD ATQASLPFAH
LLPASSATPE FVNTVWPTNM QRALNGEITA AQMNEAIAKL FAEE
|
|---|
| |