More than 300 homologs were found in PanDaTox collection
for query gene Swit_3822 on replicon NC_009511
Organism: Sphingomonas wittichii RW1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009511  Swit_3822  methyl-accepting chemotaxis sensory transducer  100 
 
 
509 aa  992    Sphingomonas wittichii RW1  Bacteria  normal  0.275517  normal  0.0305498 
 
 
-
 
NC_007643  Rru_A2142  chemotaxis sensory transducer  30.26 
 
 
485 aa  199  7e-50  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.913204  n/a   
 
 
-
 
NC_011894  Mnod_3496  methyl-accepting chemotaxis sensory transducer  38.67 
 
 
490 aa  193  5e-48  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A2146  methyl-accepting chemotaxis sensory transducer  31.44 
 
 
485 aa  192  1e-47  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_008347  Mmar10_0031  methyl-accepting chemotaxis sensory transducer  30.72 
 
 
485 aa  186  1.0000000000000001e-45  Maricaulis maris MCS10  Bacteria  normal  normal 
 
 
-
 
NC_009484  Acry_0599  methyl-accepting chemotaxis sensory transducer  30.74 
 
 
537 aa  162  9e-39  Acidiphilium cryptum JF-5  Bacteria  normal  0.765764  n/a   
 
 
-
 
NC_007925  RPC_2744  methyl-accepting chemotaxis sensory transducer  38.49 
 
 
572 aa  161  3e-38  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.696609  normal  0.585687 
 
 
-
 
NC_009485  BBta_0969  methyl-accepting chemotaxis sensory transducer  36.39 
 
 
562 aa  154  4e-36  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.956339  normal  0.570918 
 
 
-
 
NC_009485  BBta_6483  methyl-accepting chemotaxis protein  37.41 
 
 
565 aa  152  1e-35  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.877741  normal 
 
 
-
 
NC_009485  BBta_2908  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  39.12 
 
 
561 aa  152  1e-35  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.07018 
 
 
-
 
NC_010172  Mext_0820  chemotaxis sensory transducer  38.97 
 
 
608 aa  151  3e-35  Methylobacterium extorquens PA1  Bacteria  normal  0.254614  normal  0.216431 
 
 
-
 
NC_007958  RPD_3904  chemotaxis sensory transducer  37.04 
 
 
566 aa  150  7e-35  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_6635  methyl-accepting chemotaxis protein  38.49 
 
 
565 aa  150  7e-35  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.459746  normal  0.104137 
 
 
-
 
NC_007778  RPB_1317  methyl-accepting chemotaxis sensory transducer  38.99 
 
 
560 aa  148  2.0000000000000003e-34  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.14669 
 
 
-
 
NC_007925  RPC_2149  methyl-accepting chemotaxis sensory transducer  35.56 
 
 
675 aa  149  2.0000000000000003e-34  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.0391093 
 
 
-
 
NC_007964  Nham_1045  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.95 
 
 
564 aa  149  2.0000000000000003e-34  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_0619  methyl-accepting chemotaxis sensory transducer  38.21 
 
 
561 aa  147  3e-34  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0130228 
 
 
-
 
NC_007925  RPC_2846  methyl-accepting chemotaxis sensory transducer  38.7 
 
 
565 aa  147  6e-34  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.430745  normal 
 
 
-
 
NC_007925  RPC_4104  methyl-accepting chemotaxis sensory transducer  37.37 
 
 
586 aa  147  6e-34  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.783692  normal 
 
 
-
 
NC_009485  BBta_2902  methyl-accepting chemotaxis sensory transducer  38.21 
 
 
563 aa  146  8.000000000000001e-34  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.32606  normal  0.0943242 
 
 
-
 
NC_009485  BBta_6717  methyl-accepting chemotaxis sensory transducer  37.11 
 
 
741 aa  146  9e-34  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.447835  normal  0.587139 
 
 
-
 
NC_007778  RPB_2250  methyl-accepting chemotaxis sensory transducer  35.24 
 
 
670 aa  146  1e-33  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_1918  chemotaxis sensory transducer  38.1 
 
 
688 aa  146  1e-33  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.537222 
 
 
-
 
NC_007958  RPD_3107  chemotaxis sensory transducer  37.28 
 
 
674 aa  146  1e-33  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0664997 
 
 
-
 
NC_007778  RPB_2358  methyl-accepting chemotaxis sensory transducer  35.56 
 
 
673 aa  145  2e-33  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.207811 
 
 
-
 
NC_009485  BBta_1840  methyl-accepting chemotaxis sensory transducer  35.64 
 
 
561 aa  144  3e-33  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.745103 
 
 
-
 
NC_009485  BBta_2901  methyl-accepting chemotaxis sensory transducer  36.79 
 
 
674 aa  144  4e-33  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.14772  normal  0.22504 
 
 
-
 
NC_011004  Rpal_4787  methyl-accepting chemotaxis sensory transducer  38.1 
 
 
561 aa  144  4e-33  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.708956  n/a   
 
 
-
 
NC_007406  Nwi_0530  methyl-accepting chemotaxis protein  34.26 
 
 
569 aa  143  6e-33  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.667624  normal 
 
 
-
 
NC_007958  RPD_0994  chemotaxis sensory transducer  35.89 
 
 
656 aa  144  6e-33  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.357708  normal 
 
 
-
 
NC_009485  BBta_2905  putative methyl-accepting chemotaxis protein  37.32 
 
 
542 aa  143  8e-33  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.234112  normal  0.211145 
 
 
-
 
NC_011004  Rpal_1871  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.37 
 
 
716 aa  143  9e-33  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_0192  methyl-accepting chemotaxis sensory transducer  36.46 
 
 
688 aa  142  9.999999999999999e-33  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_4105  methyl-accepting chemotaxis sensory transducer  38.01 
 
 
561 aa  142  9.999999999999999e-33  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.916882  normal 
 
 
-
 
NC_011004  Rpal_3598  methyl-accepting chemotaxis sensory transducer  36.19 
 
 
672 aa  141  1.9999999999999998e-32  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_2738  methyl-accepting chemotaxis sensory transducer  37.99 
 
 
562 aa  142  1.9999999999999998e-32  Methylobacterium sp. 4-46  Bacteria  normal  0.809654  normal  0.020868 
 
 
-
 
NC_011004  Rpal_4783  methyl-accepting chemotaxis sensory transducer  35.35 
 
 
730 aa  142  1.9999999999999998e-32  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_1843  methyl-accepting chemotaxis sensory transducer  34.44 
 
 
568 aa  142  1.9999999999999998e-32  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.618754 
 
 
-
 
NC_010725  Mpop_0741  methyl-accepting chemotaxis sensory transducer  39.31 
 
 
558 aa  141  1.9999999999999998e-32  Methylobacterium populi BJ001  Bacteria  normal  0.532986  normal 
 
 
-
 
NC_011004  Rpal_4788  methyl-accepting chemotaxis sensory transducer  39.19 
 
 
561 aa  141  1.9999999999999998e-32  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_0065  chemotaxis sensory transducer  34.35 
 
 
688 aa  142  1.9999999999999998e-32  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0714339 
 
 
-
 
NC_011757  Mchl_3907  methyl-accepting chemotaxis sensory transducer  37.26 
 
 
565 aa  141  3e-32  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_2904  putative methyl-accepting chemotaxis protein  36.57 
 
 
568 aa  140  3.9999999999999997e-32  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.481458  normal  0.283558 
 
 
-
 
NC_009485  BBta_2368  putative methyl-accepting chemotaxis receptor/sensory transducer precursor  37.14 
 
 
561 aa  140  4.999999999999999e-32  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.280114 
 
 
-
 
NC_007406  Nwi_2996  methyl-accepting chemotaxis protein  35.37 
 
 
698 aa  140  6e-32  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_4292  methyl-accepting chemotaxis sensory transducer  33.12 
 
 
535 aa  140  6e-32  Caulobacter sp. K31  Bacteria  normal  normal  0.432431 
 
 
-
 
NC_010725  Mpop_0581  methyl-accepting chemotaxis sensory transducer  38.59 
 
 
562 aa  140  6e-32  Methylobacterium populi BJ001  Bacteria  normal  0.0281709  decreased coverage  0.00474558 
 
 
-
 
NC_007643  Rru_A2484  chemotaxis sensory transducer  37.59 
 
 
563 aa  139  7.999999999999999e-32  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.1562  n/a   
 
 
-
 
NC_007778  RPB_1316  methyl-accepting chemotaxis sensory transducer  38.54 
 
 
561 aa  140  7.999999999999999e-32  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.234166 
 
 
-
 
NC_007643  Rru_A1293  methyl-accepting chemotaxis sensory transducer  36.55 
 
 
562 aa  139  8.999999999999999e-32  Rhodospirillum rubrum ATCC 11170  Bacteria  decreased coverage  0.00511002  n/a   
 
 
-
 
NC_007964  Nham_1080  methyl-accepting chemotaxis sensory transducer  35.67 
 
 
698 aa  139  1e-31  Nitrobacter hamburgensis X14  Bacteria  normal  0.0139762  n/a   
 
 
-
 
NC_011004  Rpal_2025  methyl-accepting chemotaxis sensory transducer  34.36 
 
 
688 aa  139  1e-31  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0110809  n/a   
 
 
-
 
NC_009485  BBta_4464  methyl-accepting chemotaxis sensory transducer  36.43 
 
 
573 aa  139  1e-31  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.610641  normal  0.757777 
 
 
-
 
NC_007778  RPB_2653  methyl-accepting chemotaxis sensory transducer  37.92 
 
 
691 aa  139  1e-31  Rhodopseudomonas palustris HaA2  Bacteria  decreased coverage  0.00184965  normal  0.0777916 
 
 
-
 
NC_007778  RPB_3545  methyl-accepting chemotaxis sensory transducer  37 
 
 
689 aa  139  1e-31  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.457552  normal  0.598514 
 
 
-
 
NC_009485  BBta_0330  putative methyl-accepting chemotaxis receptor/sensory transducer  35.05 
 
 
676 aa  139  1e-31  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0869057 
 
 
-
 
NC_007925  RPC_3380  methyl-accepting chemotaxis sensory transducer  35.54 
 
 
567 aa  139  1e-31  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.689596 
 
 
-
 
NC_007925  RPC_4147  methyl-accepting chemotaxis sensory transducer  36.65 
 
 
694 aa  139  1e-31  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_0995  chemotaxis sensory transducer  35.29 
 
 
656 aa  139  1e-31  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.880627  normal 
 
 
-
 
NC_011004  Rpal_5144  methyl-accepting chemotaxis sensory transducer  35.03 
 
 
686 aa  138  2e-31  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_0575  methyl-accepting chemotaxis sensory transducer  36.42 
 
 
681 aa  139  2e-31  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A2554  methyl-accepting chemotaxis sensory transducer  37.1 
 
 
644 aa  139  2e-31  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.0186678  n/a   
 
 
-
 
NC_007925  RPC_1709  methyl-accepting chemotaxis sensory transducer  35.46 
 
 
568 aa  138  2e-31  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.55655  normal  0.12205 
 
 
-
 
NC_009485  BBta_6993  putative methyl-accepting chemotaxis receptor/sensory transducer  36.25 
 
 
697 aa  139  2e-31  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_0779  methyl-accepting chemotaxis sensory transducer with Cache sensor  38.62 
 
 
558 aa  138  2e-31  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0546434  normal  0.151916 
 
 
-
 
NC_014148  Plim_1909  chemotaxis sensory transducer  35.16 
 
 
965 aa  139  2e-31  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.11776  n/a   
 
 
-
 
NC_009485  BBta_2367  putative methyl-accepting chemotaxis receptor/sensory transducer precursor  37.14 
 
 
562 aa  137  4e-31  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.287749 
 
 
-
 
NC_007958  RPD_2465  chemotaxis sensory transducer  35.46 
 
 
561 aa  137  4e-31  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.5909  normal  0.697276 
 
 
-
 
NC_009485  BBta_5110  hypothetical protein  35.9 
 
 
688 aa  137  6.0000000000000005e-31  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.791751 
 
 
-
 
NC_009485  BBta_2906  putative methyl-accepting chemotaxis protein  37.16 
 
 
564 aa  137  7.000000000000001e-31  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.430156  normal  0.106702 
 
 
-
 
NC_009485  BBta_2799  putative receptor/sensory transducer  38.57 
 
 
707 aa  136  8e-31  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0655652  normal 
 
 
-
 
NC_007958  RPD_1867  chemotaxis sensory transducer  32.54 
 
 
714 aa  136  9e-31  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.133032 
 
 
-
 
NC_007778  RPB_2983  methyl-accepting chemotaxis sensory transducer  35.14 
 
 
561 aa  135  9.999999999999999e-31  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.0323515 
 
 
-
 
NC_011004  Rpal_1830  methyl-accepting chemotaxis sensory transducer  36.61 
 
 
563 aa  136  9.999999999999999e-31  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_0153  chemotaxis sensory transducer  36.06 
 
 
602 aa  135  9.999999999999999e-31  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_1857  chemotaxis sensory transducer  35.89 
 
 
563 aa  135  9.999999999999999e-31  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_2142  methyl-accepting chemotaxis sensory transducer  36.26 
 
 
428 aa  135  1.9999999999999998e-30  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.293169  n/a   
 
 
-
 
NC_011004  Rpal_2757  methyl-accepting chemotaxis sensory transducer  34.64 
 
 
561 aa  135  1.9999999999999998e-30  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0630329  n/a   
 
 
-
 
NC_011004  Rpal_5172  methyl-accepting chemotaxis sensory transducer  33.91 
 
 
656 aa  135  1.9999999999999998e-30  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_0885  putative methyl-accepting chemotaxis protein  36.67 
 
 
691 aa  135  1.9999999999999998e-30  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.493714  normal 
 
 
-
 
NC_007778  RPB_1321  methyl-accepting chemotaxis sensory transducer  36 
 
 
730 aa  135  1.9999999999999998e-30  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0177086  normal  0.260794 
 
 
-
 
NC_009485  BBta_4269  putative methyl-accepting chemotaxis receptor/sensory transducer protein  35.53 
 
 
691 aa  134  3e-30  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.35374 
 
 
-
 
NC_011757  Mchl_5373  methyl-accepting chemotaxis sensory transducer  37.42 
 
 
565 aa  134  3e-30  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.620524  normal  0.472724 
 
 
-
 
NC_007778  RPB_4286  methyl-accepting chemotaxis sensory transducer  34.19 
 
 
563 aa  134  3e-30  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_3161  methyl-accepting chemotaxis sensory transducer  35.05 
 
 
731 aa  134  3e-30  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.072786  normal 
 
 
-
 
NC_007925  RPC_3476  methyl-accepting chemotaxis sensory transducer  34.58 
 
 
641 aa  134  3e-30  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.640734  normal 
 
 
-
 
NC_007925  RPC_4407  methyl-accepting chemotaxis sensory transducer  31.25 
 
 
566 aa  135  3e-30  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.365939 
 
 
-
 
NC_007643  Rru_A1177  chemotaxis sensory transducer  37.37 
 
 
469 aa  134  3.9999999999999996e-30  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.5025  n/a   
 
 
-
 
NC_007925  RPC_3379  methyl-accepting chemotaxis sensory transducer  36.43 
 
 
587 aa  134  6e-30  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.787169  normal 
 
 
-
 
NC_007925  RPC_4406  methyl-accepting chemotaxis sensory transducer  34.49 
 
 
566 aa  133  7.999999999999999e-30  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.341232 
 
 
-
 
NC_010505  Mrad2831_2241  methyl-accepting chemotaxis sensory transducer  37.58 
 
 
566 aa  133  9e-30  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_7508  putative methyl-accepting chemotaxis protein (with a HAMP region)  35.64 
 
 
552 aa  132  1.0000000000000001e-29  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.692825  normal 
 
 
-
 
NC_009485  BBta_1536  methyl-accepting chemotaxis protein  36.59 
 
 
716 aa  132  1.0000000000000001e-29  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.566253  normal  0.284447 
 
 
-
 
NC_010172  Mext_3147  chemotaxis sensory transducer  37.34 
 
 
561 aa  132  1.0000000000000001e-29  Methylobacterium extorquens PA1  Bacteria  normal  0.0908078  normal 
 
 
-
 
NC_009485  BBta_0644  putative methyl-accepting chemotaxis receptor/sensory transducer  36.24 
 
 
565 aa  132  1.0000000000000001e-29  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_3547  chemotaxis sensory transducer  34.45 
 
 
566 aa  132  1.0000000000000001e-29  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_3471  methyl-accepting chemotaxis sensory transducer  37.34 
 
 
561 aa  132  1.0000000000000001e-29  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.130295  normal 
 
 
-
 
NC_010725  Mpop_0143  methyl-accepting chemotaxis sensory transducer  34.93 
 
 
580 aa  132  1.0000000000000001e-29  Methylobacterium populi BJ001  Bacteria  normal  0.314848  normal  0.17167 
 
 
-
 
NC_007958  RPD_1025  methyl-accepting chemotaxis sensory transducer  35.94 
 
 
681 aa  133  1.0000000000000001e-29  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_4527  methyl-accepting chemotaxis sensory transducer  35.51 
 
 
667 aa  132  2.0000000000000002e-29  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.527831 
 
 
-
 
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